RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 TMEM238C9JI98 176 aa11.06□□□□□ -0.64
HLA-F-220ENST00000434407 KRTAP1-4P0C5Y4 121 aa11.06□□□□□ -0.64
HLA-F-220ENST00000434407 SOSTDC1Q6X4U4 206 aa11.05□□□□□ -0.64
HLA-F-220ENST00000434407 TRBV10-2A0A0K0K1G8 114 aa11.04□□□□□ -0.64
HLA-F-220ENST00000434407 NCR3O14931 201 aa11.04□□□□□ -0.64
HLA-F-220ENST00000434407 EIF4EBP3O60516 100 aaPredicted RBP11.04□□□□□ -0.64
HLA-F-220ENST00000434407 NDUFC2O95298 119 aa11.04□□□□□ -0.64
HLA-F-220ENST00000434407 CTAG1AP78358 180 aa11.03□□□□□ -0.64
HLA-F-220ENST00000434407 C2orf91Q6ZV80 131 aa11.03□□□□□ -0.64
HLA-F-220ENST00000434407 HIGD1BQ9P298 99 aa11.03□□□□□ -0.64
HLA-F-220ENST00000434407 SCGB1D4Q6XE38 83 aa11.02□□□□□ -0.65
HLA-F-220ENST00000434407 KCNQ1DNQ9H478 68 aa11.02□□□□□ -0.65
HLA-F-220ENST00000434407 KRTAP9-6A0A140TA67 174 aa11.01□□□□□ -0.65
HLA-F-220ENST00000434407 PRYO14603 147 aa11.01□□□□□ -0.65
HLA-F-220ENST00000434407 UBE2AP49459 152 aa11.01□□□□□ -0.65
HLA-F-220ENST00000434407 SPANXB1Q9NS25 103 aaPredicted RBP11.01□□□□□ -0.65
HLA-F-220ENST00000434407 TRBV10-3A0A0K0K1G6 114 aa11□□□□□ -0.65
HLA-F-220ENST00000434407 SPRR1AP35321 89 aa11□□□□□ -0.65
HLA-F-220ENST00000434407 LINC00308Q8TCZ7 52 aa11□□□□□ -0.65
HLA-F-220ENST00000434407 FAM19A1Q7Z5A9 133 aa10.99□□□□□ -0.65
HLA-F-220ENST00000434407 KRTAP4-16G5E9R7 235 aaPredicted RBP10.98□□□□□ -0.65
HLA-F-220ENST00000434407 NPC2P61916 151 aa10.98□□□□□ -0.65
HLA-F-220ENST00000434407 PRLHP81277 87 aa10.98□□□□□ -0.65
HLA-F-220ENST00000434407 IGLV6-57P01721 117 aa10.97□□□□□ -0.65
HLA-F-220ENST00000434407 LINC00337Q8N6G1 96 aa10.97□□□□□ -0.65
HLA-F-220ENST00000434407 PRR26Q8N8Z3 221 aa10.97□□□□□ -0.65
HLA-F-220ENST00000434407 SPANXDQ9BXN6 97 aa10.97□□□□□ -0.65
HLA-F-220ENST00000434407 SPANXCQ9NY87 97 aa10.97□□□□□ -0.65
HLA-F-220ENST00000434407 HSD52Q0P140 79 aa10.95□□□□□ -0.66
HLA-F-220ENST00000434407 M0R143 59 aa10.94□□□□□ -0.66
HLA-F-220ENST00000434407 TAL2Q16559 108 aa10.94□□□□□ -0.66
HLA-F-220ENST00000434407 HIST1H4GQ99525 98 aa10.94□□□□□ -0.66
HLA-F-220ENST00000434407 PPDPFQ9H3Y8 114 aa10.94□□□□□ -0.66
HLA-F-220ENST00000434407 HMCN2Q8NDA2 5059 aa10.93□□□□□ -0.66
HLA-F-220ENST00000434407 HINT1P49773 126 aaPredicted RBP10.93□□□□□ -0.66
HLA-F-220ENST00000434407 Q6ZVH6 145 aa10.92□□□□□ -0.66
HLA-F-220ENST00000434407 IFITM1P13164 125 aa10.91□□□□□ -0.66
HLA-F-220ENST00000434407 RPL13AP40429 203 aaKnown RBP10.91□□□□□ -0.66
HLA-F-220ENST00000434407 S100A7L2Q5SY68 101 aa10.91□□□□□ -0.66
HLA-F-220ENST00000434407 BATFQ16520 125 aa10.9□□□□□ -0.66
HLA-F-220ENST00000434407 BVES-AS1Q5T3Y7 98 aa10.9□□□□□ -0.66
HLA-F-220ENST00000434407 A0A087X002 238 aa10.89□□□□□ -0.67
HLA-F-220ENST00000434407 ETDCA0A1B0GVM5 59 aa10.89□□□□□ -0.67
HLA-F-220ENST00000434407 CEND1Q8N111 149 aa10.89□□□□□ -0.67
HLA-F-220ENST00000434407 COPS9Q8WXC6 57 aa10.89□□□□□ -0.67
HLA-F-220ENST00000434407 SNHG12Q9BXW3 62 aa10.89□□□□□ -0.67
HLA-F-220ENST00000434407 B5MCH6 92 aa10.88□□□□□ -0.67
HLA-F-220ENST00000434407 FAM229BQ4G0N7 80 aa10.88□□□□□ -0.67
HLA-F-220ENST00000434407 HIGD2AQ9BW72 106 aa10.88□□□□□ -0.67
HLA-F-220ENST00000434407 TRAV23DV6A0A075B6W5 121 aa10.87□□□□□ -0.67
HLA-F-220ENST00000434407 CRYGAP11844 174 aa10.87□□□□□ -0.67
HLA-F-220ENST00000434407 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
HLA-F-220ENST00000434407 SMCR5Q8TEV8 140 aa10.86□□□□□ -0.67
HLA-F-220ENST00000434407 CBY1Q9Y3M2 126 aa10.86□□□□□ -0.67
HLA-F-220ENST00000434407 MUSTN1Q8IVN3 82 aa10.85□□□□□ -0.67
HLA-F-220ENST00000434407 ZNF73O43830 326 aaPredicted RBP10.84□□□□□ -0.67
HLA-F-220ENST00000434407 KRTAP13-2Q52LG2 175 aa10.84□□□□□ -0.67
HLA-F-220ENST00000434407 Q6ZRX8 168 aa10.84□□□□□ -0.67
HLA-F-220ENST00000434407 FXYD2P54710 66 aa10.83□□□□□ -0.68
HLA-F-220ENST00000434407 SPRR4Q96PI1 79 aa10.83□□□□□ -0.68
HLA-F-220ENST00000434407 Q9BRP9 147 aa10.83□□□□□ -0.68
HLA-F-220ENST00000434407 A6NDN8 102 aa10.82□□□□□ -0.68
HLA-F-220ENST00000434407 OR13C6PQ8NH95 151 aa10.82□□□□□ -0.68
HLA-F-220ENST00000434407 TMEM238LA0A1B0GVL6 79 aa10.81□□□□□ -0.68
HLA-F-220ENST00000434407 A6NJY4 79 aa10.81□□□□□ -0.68
HLA-F-220ENST00000434407 COL5A1-AS1Q5SY13 56 aa10.81□□□□□ -0.68
HLA-F-220ENST00000434407 ZNF706Q9Y5V0 76 aaPredicted RBP10.8□□□□□ -0.68
HLA-F-220ENST00000434407 ERC2-IT1O76042 136 aa10.79□□□□□ -0.68
HLA-F-220ENST00000434407 TYMSOSQ8TAI1 123 aa10.79□□□□□ -0.68
HLA-F-220ENST00000434407 A4D1N5 150 aa10.77□□□□□ -0.69
HLA-F-220ENST00000434407 LINC00483Q53H64 154 aa10.77□□□□□ -0.69
HLA-F-220ENST00000434407 LCE3BQ5TA77 95 aa10.77□□□□□ -0.69
HLA-F-220ENST00000434407 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.69
HLA-F-220ENST00000434407 TRAV13-2A0A0B4J235 113 aa10.74□□□□□ -0.69
HLA-F-220ENST00000434407 A0A1B0GWB2 263 aa10.74□□□□□ -0.69
HLA-F-220ENST00000434407 KRTAP4-12Q9BQ66 201 aa10.74□□□□□ -0.69
HLA-F-220ENST00000434407 TRBV7-6A0A0J9YX20 115 aa10.73□□□□□ -0.69
HLA-F-220ENST00000434407 CFC1BP0CG36 223 aa10.73□□□□□ -0.69
HLA-F-220ENST00000434407 CFC1P0CG37 223 aa10.73□□□□□ -0.69
HLA-F-220ENST00000434407 ELOF1P60002 83 aaKnown RBP10.73□□□□□ -0.69
HLA-F-220ENST00000434407 C6orf99Q4VX62 202 aa10.73□□□□□ -0.69
HLA-F-220ENST00000434407 C3orf22Q8N5N4 141 aa10.73□□□□□ -0.69
HLA-F-220ENST00000434407 K7ERJ3 54 aa10.71□□□□□ -0.69
HLA-F-220ENST00000434407 RAB37Q96AX2 223 aa10.71□□□□□ -0.69
HLA-F-220ENST00000434407 DHRS4-AS1Q9P1J3 65 aa10.71□□□□□ -0.69
HLA-F-220ENST00000434407 A0A0B4J2C4 111 aa10.7□□□□□ -0.7
HLA-F-220ENST00000434407 TAX1BP3O14907 124 aa10.7□□□□□ -0.7
HLA-F-220ENST00000434407 COX7BP24311 80 aa10.7□□□□□ -0.7
HLA-F-220ENST00000434407 GAGE2AQ6NT46 116 aa10.7□□□□□ -0.7
HLA-F-220ENST00000434407 LRP2P98164 4655 aa10.7□□□□□ -0.7
HLA-F-220ENST00000434407 LINC00304Q8N9R0 145 aa10.68□□□□□ -0.7
HLA-F-220ENST00000434407 PRO1854Q9UHT4 67 aa10.68□□□□□ -0.7
HLA-F-220ENST00000434407 SMIM11BQ8TCY0 68 aa10.67□□□□□ -0.7
HLA-F-220ENST00000434407 ST20-AS1Q8NBB2 130 aa10.66□□□□□ -0.7
HLA-F-220ENST00000434407 C9orf118A6NHY6 69 aa10.65□□□□□ -0.7
HLA-F-220ENST00000434407 TSPAN13O95857 204 aa10.64□□□□□ -0.71
HLA-F-220ENST00000434407 SPRR1BP22528 89 aa10.64□□□□□ -0.71
HLA-F-220ENST00000434407 H3BUT2 72 aa10.61□□□□□ -0.71
HLA-F-220ENST00000434407 H7C2G1 150 aa10.61□□□□□ -0.71
HLA-F-220ENST00000434407 SPAG11AQ6PDA7 123 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms