RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 CHTF8P0CG12 524 aa4.38□□□□□ -1.71
GTF2A1-202ENST00000434192 SDIM1Q6ZPB5 146 aa4.38□□□□□ -1.71
GTF2A1-202ENST00000434192 NKAPP1Q8N9T2 125 aa4.38□□□□□ -1.71
GTF2A1-202ENST00000434192 SPACA4Q8TDM5 124 aa4.38□□□□□ -1.71
GTF2A1-202ENST00000434192 RAB37Q96AX2 223 aa4.38□□□□□ -1.71
GTF2A1-202ENST00000434192 LRP1BQ9NZR2 4599 aa4.38□□□□□ -1.71
GTF2A1-202ENST00000434192 KIAA1109Q2LD37 5005 aa4.37□□□□□ -1.71
GTF2A1-202ENST00000434192 TRAV13-2A0A0B4J235 113 aa4.37□□□□□ -1.71
GTF2A1-202ENST00000434192 TRBV10-2A0A0K0K1G8 114 aa4.37□□□□□ -1.71
GTF2A1-202ENST00000434192 K7ERJ3 54 aa4.37□□□□□ -1.71
GTF2A1-202ENST00000434192 VPREB1P12018 145 aa4.37□□□□□ -1.71
GTF2A1-202ENST00000434192 SERTAD4-AS1Q5TG53 156 aa4.37□□□□□ -1.71
GTF2A1-202ENST00000434192 FAM19A5Q7Z5A7 132 aaPredicted RBP4.37□□□□□ -1.71
GTF2A1-202ENST00000434192 IGLV5-37A0A075B6J1 123 aa4.36□□□□□ -1.71
GTF2A1-202ENST00000434192 IGKV2-28A0A075B6P5 120 aa4.36□□□□□ -1.71
GTF2A1-202ENST00000434192 A0A1B0GWB2 263 aa4.36□□□□□ -1.71
GTF2A1-202ENST00000434192 FAM168BA1KXE4 195 aa4.36□□□□□ -1.71
GTF2A1-202ENST00000434192 M0QXV9 152 aa4.36□□□□□ -1.71
GTF2A1-202ENST00000434192 IGKV2D-28P01615 120 aa4.36□□□□□ -1.71
GTF2A1-202ENST00000434192 CFC1BP0CG36 223 aa4.36□□□□□ -1.71
GTF2A1-202ENST00000434192 CFC1P0CG37 223 aa4.36□□□□□ -1.71
GTF2A1-202ENST00000434192 RPL13AP40429 203 aaKnown RBP4.36□□□□□ -1.71
GTF2A1-202ENST00000434192 S100A7L2Q5SY68 101 aa4.36□□□□□ -1.71
GTF2A1-202ENST00000434192 Q8NDZ9 215 aa4.36□□□□□ -1.71
GTF2A1-202ENST00000434192 APOBP04114 4563 aaKnown RBP4.35□□□□□ -1.71
GTF2A1-202ENST00000434192 M0R378 163 aa4.35□□□□□ -1.71
GTF2A1-202ENST00000434192 Q1RN00 199 aa4.35□□□□□ -1.71
GTF2A1-202ENST00000434192 COL5A1-AS1Q5SY13 56 aa4.35□□□□□ -1.71
GTF2A1-202ENST00000434192 LINC00337Q8N6G1 96 aa4.35□□□□□ -1.71
GTF2A1-202ENST00000434192 OR13C6PQ8NH95 151 aa4.35□□□□□ -1.71
GTF2A1-202ENST00000434192 PRO1854Q9UHT4 67 aa4.35□□□□□ -1.71
GTF2A1-202ENST00000434192 PANO1I0J062 215 aa4.34□□□□□ -1.71
GTF2A1-202ENST00000434192 PRR3P79522 188 aaKnown RBP4.34□□□□□ -1.71
GTF2A1-202ENST00000434192 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.71
GTF2A1-202ENST00000434192 TMEM126AQ9H061 195 aa4.34□□□□□ -1.71
GTF2A1-202ENST00000434192 RYR1P21817 5038 aa4.34□□□□□ -1.71
GTF2A1-202ENST00000434192 TRAV23DV6A0A075B6W5 121 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 A0A087WYN8 130 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 TRBV10-3A0A0K0K1G6 114 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 A0A1W2PNN7 141 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 GAGE10A6NGK3 116 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 H7C2G1 150 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 CDK2AP2O75956 126 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 TSPAN13O95857 204 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 IGLV6-57P01721 117 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 KRTAP10-1P60331 282 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 Q6ZSA8 131 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 C7orf33Q8WU49 177 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 DPH3Q96FX2 82 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 C22orf24Q9Y442 160 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 HSPG2P98160 4391 aa4.33□□□□□ -1.72
GTF2A1-202ENST00000434192 UBE2BP63146 152 aa4.32□□□□□ -1.72
GTF2A1-202ENST00000434192 KRTAP7-1Q8IUC3 87 aa4.32□□□□□ -1.72
GTF2A1-202ENST00000434192 PLAC8Q9NZF1 115 aa4.32□□□□□ -1.72
GTF2A1-202ENST00000434192 TAX1BP3O14907 124 aa4.31□□□□□ -1.72
GTF2A1-202ENST00000434192 PSMB2P49721 201 aa4.31□□□□□ -1.72
GTF2A1-202ENST00000434192 LYRM7Q5U5X0 104 aa4.31□□□□□ -1.72
GTF2A1-202ENST00000434192 SCXQ7RTU7 201 aa4.31□□□□□ -1.72
GTF2A1-202ENST00000434192 PHF5AQ7RTV0 110 aaKnown RBP4.31□□□□□ -1.72
GTF2A1-202ENST00000434192 SMIM11BQ8TCY0 68 aa4.31□□□□□ -1.72
GTF2A1-202ENST00000434192 DIRC1Q969H9 104 aa4.31□□□□□ -1.72
GTF2A1-202ENST00000434192 LINC00167Q96N53 147 aa4.31□□□□□ -1.72
GTF2A1-202ENST00000434192 IGLV1-50A0A075B6I6 118 aa4.3□□□□□ -1.72
GTF2A1-202ENST00000434192 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
GTF2A1-202ENST00000434192 RPL37AP8A6NKH3 93 aa4.3□□□□□ -1.72
GTF2A1-202ENST00000434192 EPM2AB3EWF7 344 aa4.3□□□□□ -1.72
GTF2A1-202ENST00000434192 H3BUT2 72 aa4.3□□□□□ -1.72
GTF2A1-202ENST00000434192 MT3P25713 68 aa4.3□□□□□ -1.72
GTF2A1-202ENST00000434192 RPL28P46779 137 aaKnown RBP4.3□□□□□ -1.72
GTF2A1-202ENST00000434192 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
GTF2A1-202ENST00000434192 ZNF73O43830 326 aaPredicted RBP4.29□□□□□ -1.72
GTF2A1-202ENST00000434192 COX6CP09669 75 aa4.29□□□□□ -1.72
GTF2A1-202ENST00000434192 C6orf99Q4VX62 202 aa4.29□□□□□ -1.72
GTF2A1-202ENST00000434192 REG3GQ6UW15 175 aa4.29□□□□□ -1.72
GTF2A1-202ENST00000434192 CIRBP-AS1Q8TBR5 109 aa4.29□□□□□ -1.72
GTF2A1-202ENST00000434192 NAA38Q9BRA0 125 aaKnown RBP4.29□□□□□ -1.72
GTF2A1-202ENST00000434192 KCNQ1DNQ9H478 68 aa4.29□□□□□ -1.72
GTF2A1-202ENST00000434192 PCLOQ9Y6V0 5065 aa4.29□□□□□ -1.72
GTF2A1-202ENST00000434192 ETDCA0A1B0GVM5 59 aa4.28□□□□□ -1.72
GTF2A1-202ENST00000434192 A0A1W2PPM0 123 aa4.28□□□□□ -1.72
GTF2A1-202ENST00000434192 HAMPP81172 84 aa4.28□□□□□ -1.72
GTF2A1-202ENST00000434192 FABP2P12104 132 aa4.27□□□□□ -1.73
GTF2A1-202ENST00000434192 SPRR1AP35321 89 aa4.27□□□□□ -1.73
GTF2A1-202ENST00000434192 ELOF1P60002 83 aaKnown RBP4.27□□□□□ -1.73
GTF2A1-202ENST00000434192 VAMP3Q15836 100 aa4.27□□□□□ -1.73
GTF2A1-202ENST00000434192 TRBV7-6A0A0J9YX20 115 aa4.26□□□□□ -1.73
GTF2A1-202ENST00000434192 H0YGX0 51 aa4.26□□□□□ -1.73
GTF2A1-202ENST00000434192 SCGB1C2P0DMR2 95 aa4.26□□□□□ -1.73
GTF2A1-202ENST00000434192 COX7BP24311 80 aa4.26□□□□□ -1.73
GTF2A1-202ENST00000434192 TRBV20-1A0A075B6N2 111 aa4.25□□□□□ -1.73
GTF2A1-202ENST00000434192 KRTAP4-16G5E9R7 235 aaPredicted RBP4.25□□□□□ -1.73
GTF2A1-202ENST00000434192 BCE1O60756 84 aa4.25□□□□□ -1.73
GTF2A1-202ENST00000434192 UBE2V1Q13404 147 aa4.25□□□□□ -1.73
GTF2A1-202ENST00000434192 Q6ZRX8 168 aa4.25□□□□□ -1.73
GTF2A1-202ENST00000434192 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
GTF2A1-202ENST00000434192 KRTAP11-1Q8IUC1 163 aa4.25□□□□□ -1.73
GTF2A1-202ENST00000434192 CLEC2BQ92478 149 aa4.25□□□□□ -1.73
GTF2A1-202ENST00000434192 PSORS1C2Q9UIG4 136 aa4.25□□□□□ -1.73
GTF2A1-202ENST00000434192 SPCS1Q9Y6A9 102 aa4.25□□□□□ -1.73
GTF2A1-202ENST00000434192 ABCA13Q86UQ4 5058 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms