RNA–Protein interactions for RNA: ENST00000434172.2

CKS1BP5-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 5, humanhuman

BASIC

Gene CKS1BP5, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP5-201ENST00000434172 SMG1Q96Q15 3661 aaKnown RBP1.45□□□□□ -2.18
CKS1BP5-201ENST00000434172 SPEGQ15772 3267 aa1.44□□□□□ -2.18
CKS1BP5-201ENST00000434172 ROS1P08922 2347 aa1.44□□□□□ -2.18
CKS1BP5-201ENST00000434172 WDFY3Q8IZQ1 3526 aa1.44□□□□□ -2.18
CKS1BP5-201ENST00000434172 EPG5Q9HCE0 2579 aa1.44□□□□□ -2.18
CKS1BP5-201ENST00000434172 ZFHX3Q15911 3703 aa1.43□□□□□ -2.18
CKS1BP5-201ENST00000434172 CHD9Q3L8U1 2897 aa1.43□□□□□ -2.18
CKS1BP5-201ENST00000434172 TRAV21A0A0B4J279 112 aa1.43□□□□□ -2.18
CKS1BP5-201ENST00000434172 LOC730098B7Z3J9 87 aa1.43□□□□□ -2.18
CKS1BP5-201ENST00000434172 DEFB112Q30KQ8 113 aa1.43□□□□□ -2.18
CKS1BP5-201ENST00000434172 ANKRD36CQ5JPF3 1778 aa1.43□□□□□ -2.18
CKS1BP5-201ENST00000434172 CHD7Q9P2D1 2997 aa1.43□□□□□ -2.18
CKS1BP5-201ENST00000434172 DNHD1Q96M86 4753 aa1.43□□□□□ -2.18
CKS1BP5-201ENST00000434172 CHD6Q8TD26 2715 aa1.42□□□□□ -2.18
CKS1BP5-201ENST00000434172 SETXQ7Z333 2677 aaKnown RBP1.42□□□□□ -2.18
CKS1BP5-201ENST00000434172 A0A0D9SFI3 127 aa1.42□□□□□ -2.18
CKS1BP5-201ENST00000434172 IFI6P09912 130 aa1.42□□□□□ -2.18
CKS1BP5-201ENST00000434172 GAFA1Q96PS6 74 aa1.42□□□□□ -2.18
CKS1BP5-201ENST00000434172 ASH1LQ9NR48 2969 aaKnown RBP1.42□□□□□ -2.18
CKS1BP5-201ENST00000434172 DNAH12Q6ZR08 3092 aa1.42□□□□□ -2.18
CKS1BP5-201ENST00000434172 ZNF292O60281 2723 aa1.42□□□□□ -2.18
CKS1BP5-201ENST00000434172 DMXL1Q9Y485 3027 aa1.41□□□□□ -2.18
CKS1BP5-201ENST00000434172 PLXNB2O15031 1838 aa1.41□□□□□ -2.18
CKS1BP5-201ENST00000434172 ANKRD36A6QL64 1941 aa1.41□□□□□ -2.18
CKS1BP5-201ENST00000434172 LINC00959A0A1B0GUT2 108 aa1.41□□□□□ -2.18
CKS1BP5-201ENST00000434172 NCOR2Q9Y618 2525 aa1.41□□□□□ -2.18
CKS1BP5-201ENST00000434172 NCOR1O75376 2440 aa1.4□□□□□ -2.18
CKS1BP5-201ENST00000434172 USP24Q9UPU5 2620 aa1.4□□□□□ -2.18
CKS1BP5-201ENST00000434172 LAMA5O15230 3695 aa1.4□□□□□ -2.19
CKS1BP5-201ENST00000434172 VPS13AQ96RL7 3174 aa1.4□□□□□ -2.19
CKS1BP5-201ENST00000434172 SPTBN4Q9H254 2564 aa1.4□□□□□ -2.19
CKS1BP5-201ENST00000434172 LCE6AA0A183 80 aa1.4□□□□□ -2.19
CKS1BP5-201ENST00000434172 H3BVH4 76 aa1.4□□□□□ -2.19
CKS1BP5-201ENST00000434172 LOC400499M0QZD8 3231 aa1.4□□□□□ -2.19
CKS1BP5-201ENST00000434172 FASNP49327 2511 aaKnown RBP1.39□□□□□ -2.19
CKS1BP5-201ENST00000434172 ACACBO00763 2458 aa1.39□□□□□ -2.19
CKS1BP5-201ENST00000434172 WFDC9Q8NEX5 89 aa1.39□□□□□ -2.19
CKS1BP5-201ENST00000434172 C10orf95Q9H7T3 257 aa1.39□□□□□ -2.19
CKS1BP5-201ENST00000434172 PTPRZ1P23471 2315 aaPredicted RBP1.39□□□□□ -2.19
CKS1BP5-201ENST00000434172 RELNP78509 3460 aa1.39□□□□□ -2.19
CKS1BP5-201ENST00000434172 MAST4O15021 2626 aa1.38□□□□□ -2.19
CKS1BP5-201ENST00000434172 TRANK1O15050 2925 aa1.38□□□□□ -2.19
CKS1BP5-201ENST00000434172 MAP1BP46821 2468 aaKnown RBP1.38□□□□□ -2.19
CKS1BP5-201ENST00000434172 ATXN8Q156A1 80 aa1.38□□□□□ -2.19
CKS1BP5-201ENST00000434172 CNFNQ9BYD5 112 aa1.38□□□□□ -2.19
CKS1BP5-201ENST00000434172 HILPDAQ9Y5L2 63 aa1.38□□□□□ -2.19
CKS1BP5-201ENST00000434172 GVINP1Q7Z2Y8 2422 aa1.38□□□□□ -2.19
CKS1BP5-201ENST00000434172 ANKRD11Q6UB99 2663 aaPredicted RBP1.38□□□□□ -2.19
CKS1BP5-201ENST00000434172 TRIOO75962 3097 aa1.38□□□□□ -2.19
CKS1BP5-201ENST00000434172 ZZEF1O43149 2961 aa1.38□□□□□ -2.19
CKS1BP5-201ENST00000434172 FLNBO75369 2602 aaKnown RBP1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 URB1O60287 2271 aaKnown RBP1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 GCN1Q92616 2671 aaKnown RBP1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 OTOGLQ3ZCN5 2332 aa1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 COX7BP24311 80 aa1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 NREPQ16612 68 aa1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 LCE3AQ5TA76 89 aa1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 TP53AIP1Q9HCN2 124 aa1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 FAM186AA6NE01 2351 aa1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 TPRP12270 2363 aaKnown RBP1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 BPTFQ12830 3046 aa1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 FRYQ5TBA9 3013 aa1.37□□□□□ -2.19
CKS1BP5-201ENST00000434172 A0A1B0GUL6 1792 aa1.36□□□□□ -2.19
CKS1BP5-201ENST00000434172 NBPF19A0A087WUL8 3843 aa1.36□□□□□ -2.19
CKS1BP5-201ENST00000434172 SFTA3P0C7M3 94 aa1.36□□□□□ -2.19
CKS1BP5-201ENST00000434172 RPL38P63173 70 aaKnown RBP1.36□□□□□ -2.19
CKS1BP5-201ENST00000434172 GNG13Q9P2W3 67 aa1.36□□□□□ -2.19
CKS1BP5-201ENST00000434172 CACNA1HO95180 2353 aa1.36□□□□□ -2.19
CKS1BP5-201ENST00000434172 RIF1Q5UIP0 2472 aaKnown RBP1.35□□□□□ -2.19
CKS1BP5-201ENST00000434172 C3orf79P0CE67 100 aa1.35□□□□□ -2.19
CKS1BP5-201ENST00000434172 KRTAP10-4P60372 401 aaPredicted RBP1.35□□□□□ -2.19
CKS1BP5-201ENST00000434172 PIGYQ3MUY2 71 aa1.35□□□□□ -2.19
CKS1BP5-201ENST00000434172 Q9Y3F1 56 aa1.35□□□□□ -2.19
CKS1BP5-201ENST00000434172 CELSR3Q9NYQ7 3312 aa1.35□□□□□ -2.19
CKS1BP5-201ENST00000434172 FRYLO94915 3013 aa1.35□□□□□ -2.19
CKS1BP5-201ENST00000434172 HELZ2Q9BYK8 2649 aaKnown RBP1.35□□□□□ -2.19
CKS1BP5-201ENST00000434172 ZFYVE26Q68DK2 2539 aa1.34□□□□□ -2.19
CKS1BP5-201ENST00000434172 ZNF462Q96JM2 2506 aa1.34□□□□□ -2.19
CKS1BP5-201ENST00000434172 CSMD1Q96PZ7 3565 aa1.34□□□□□ -2.19
CKS1BP5-201ENST00000434172 A0A0D9SG42 100 aa1.34□□□□□ -2.19
CKS1BP5-201ENST00000434172 I3L2K1 104 aa1.34□□□□□ -2.19
CKS1BP5-201ENST00000434172 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
CKS1BP5-201ENST00000434172 USMG5Q96IX5 58 aa1.34□□□□□ -2.19
CKS1BP5-201ENST00000434172 NBEAQ8NFP9 2946 aa1.34□□□□□ -2.2
CKS1BP5-201ENST00000434172 EP300Q09472 2414 aaPredicted RBP1.34□□□□□ -2.2
CKS1BP5-201ENST00000434172 CEP250Q9BV73 2442 aa1.34□□□□□ -2.2
CKS1BP5-201ENST00000434172 NAV2Q8IVL1 2488 aa1.33□□□□□ -2.2
CKS1BP5-201ENST00000434172 TENM4Q6N022 2769 aa1.33□□□□□ -2.2
CKS1BP5-201ENST00000434172 USP9XQ93008 2570 aaPredicted RBP1.33□□□□□ -2.2
CKS1BP5-201ENST00000434172 WDR87Q6ZQQ6 2873 aa1.33□□□□□ -2.2
CKS1BP5-201ENST00000434172 FXYD6-FXYD2A0A087WZ82 144 aa1.33□□□□□ -2.2
CKS1BP5-201ENST00000434172 FREM2Q5SZK8 3169 aa1.33□□□□□ -2.2
CKS1BP5-201ENST00000434172 DMXL2Q8TDJ6 3036 aa1.32□□□□□ -2.2
CKS1BP5-201ENST00000434172 ITPR1Q14643 2758 aa1.32□□□□□ -2.2
CKS1BP5-201ENST00000434172 FBN3Q75N90 2809 aa1.32□□□□□ -2.2
CKS1BP5-201ENST00000434172 CACNA1EQ15878 2313 aa1.32□□□□□ -2.2
CKS1BP5-201ENST00000434172 TEP1Q99973 2627 aaKnown RBP1.32□□□□□ -2.2
CKS1BP5-201ENST00000434172 FBN2P35556 2912 aa1.32□□□□□ -2.2
CKS1BP5-201ENST00000434172 SPTY2D1-AS1A0A0U1RR47 76 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms