RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 KRTAP4-16G5E9R7 235 aaPredicted RBP8.72□□□□□ -1.01
CSTF3-202ENST00000431742 H0Y9J4 135 aa8.72□□□□□ -1.01
CSTF3-202ENST00000431742 RPL28P46779 137 aaKnown RBP8.72□□□□□ -1.01
CSTF3-202ENST00000431742 S100A7L2Q5SY68 101 aa8.72□□□□□ -1.01
CSTF3-202ENST00000431742 LINC00518Q8N0U6 118 aa8.72□□□□□ -1.01
CSTF3-202ENST00000431742 LINC00337Q8N6G1 96 aa8.72□□□□□ -1.01
CSTF3-202ENST00000431742 DIRC1Q969H9 104 aa8.72□□□□□ -1.01
CSTF3-202ENST00000431742 KRTAP4-6Q9BYQ5 205 aa8.72□□□□□ -1.01
CSTF3-202ENST00000431742 KRTAP29-1A8MX34 341 aaPredicted RBP8.7□□□□□ -1.02
CSTF3-202ENST00000431742 PRLHP81277 87 aa8.7□□□□□ -1.02
CSTF3-202ENST00000431742 FAM19A1Q7Z5A9 133 aa8.7□□□□□ -1.02
CSTF3-202ENST00000431742 TNXBP22105 4242 aa8.7□□□□□ -1.02
CSTF3-202ENST00000431742 DMBT1Q9UGM3 2413 aaPredicted RBP8.69□□□□□ -1.02
CSTF3-202ENST00000431742 LOC105371267A0A1B0GV96 52 aa8.69□□□□□ -1.02
CSTF3-202ENST00000431742 OXTP01178 125 aa8.69□□□□□ -1.02
CSTF3-202ENST00000431742 UBE2AP49459 152 aa8.69□□□□□ -1.02
CSTF3-202ENST00000431742 S100A12P80511 92 aa8.69□□□□□ -1.02
CSTF3-202ENST00000431742 TRAV23DV6A0A075B6W5 121 aa8.68□□□□□ -1.02
CSTF3-202ENST00000431742 SMIM6P0DI80 62 aa8.68□□□□□ -1.02
CSTF3-202ENST00000431742 HIST1H4GQ99525 98 aa8.68□□□□□ -1.02
CSTF3-202ENST00000431742 A4D1N5 150 aa8.67□□□□□ -1.02
CSTF3-202ENST00000431742 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
CSTF3-202ENST00000431742 OR13C6PQ8NH95 151 aa8.66□□□□□ -1.02
CSTF3-202ENST00000431742 CBY1Q9Y3M2 126 aa8.66□□□□□ -1.02
CSTF3-202ENST00000431742 ETDCA0A1B0GVM5 59 aa8.65□□□□□ -1.02
CSTF3-202ENST00000431742 B5MCH6 92 aa8.65□□□□□ -1.02
CSTF3-202ENST00000431742 ZNF73O43830 326 aaPredicted RBP8.65□□□□□ -1.02
CSTF3-202ENST00000431742 LINC01600Q96MT4 127 aa8.65□□□□□ -1.02
CSTF3-202ENST00000431742 TAL2Q16559 108 aa8.64□□□□□ -1.03
CSTF3-202ENST00000431742 TRAV13-2A0A0B4J235 113 aa8.63□□□□□ -1.03
CSTF3-202ENST00000431742 MT1HL1P0DM35 61 aa8.63□□□□□ -1.03
CSTF3-202ENST00000431742 Q6ZRX8 168 aa8.63□□□□□ -1.03
CSTF3-202ENST00000431742 UQCR10Q9UDW1 63 aa8.63□□□□□ -1.03
CSTF3-202ENST00000431742 A6NDN8 102 aa8.62□□□□□ -1.03
CSTF3-202ENST00000431742 HIGD2AQ9BW72 106 aa8.62□□□□□ -1.03
CSTF3-202ENST00000431742 SMCR5Q8TEV8 140 aa8.61□□□□□ -1.03
CSTF3-202ENST00000431742 Q9BRP9 147 aa8.61□□□□□ -1.03
CSTF3-202ENST00000431742 CEND1Q8N111 149 aa8.6□□□□□ -1.03
CSTF3-202ENST00000431742 C12orf57Q99622 126 aa8.6□□□□□ -1.03
CSTF3-202ENST00000431742 HSD52Q0P140 79 aa8.59□□□□□ -1.03
CSTF3-202ENST00000431742 C6orf99Q4VX62 202 aa8.59□□□□□ -1.03
CSTF3-202ENST00000431742 TRBV7-6A0A0J9YX20 115 aa8.58□□□□□ -1.04
CSTF3-202ENST00000431742 CFC1BP0CG36 223 aa8.58□□□□□ -1.04
CSTF3-202ENST00000431742 CFC1P0CG37 223 aa8.58□□□□□ -1.04
CSTF3-202ENST00000431742 ELOF1P60002 83 aaKnown RBP8.58□□□□□ -1.04
CSTF3-202ENST00000431742 KRTAP10-8P60410 259 aa8.58□□□□□ -1.04
CSTF3-202ENST00000431742 SMIM11BQ8TCY0 68 aa8.58□□□□□ -1.04
CSTF3-202ENST00000431742 A0A0B4J2C4 111 aa8.57□□□□□ -1.04
CSTF3-202ENST00000431742 RPL13AP40429 203 aaKnown RBP8.57□□□□□ -1.04
CSTF3-202ENST00000431742 HINT1P49773 126 aaPredicted RBP8.57□□□□□ -1.04
CSTF3-202ENST00000431742 FXYD2P54710 66 aa8.57□□□□□ -1.04
CSTF3-202ENST00000431742 PRO1933Q9H354 126 aa8.57□□□□□ -1.04
CSTF3-202ENST00000431742 HERC1Q15751 4861 aa8.57□□□□□ -1.04
CSTF3-202ENST00000431742 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
CSTF3-202ENST00000431742 PRR26Q8N8Z3 221 aa8.56□□□□□ -1.04
CSTF3-202ENST00000431742 SPRR4Q96PI1 79 aa8.56□□□□□ -1.04
CSTF3-202ENST00000431742 TMEM238LA0A1B0GVL6 79 aa8.55□□□□□ -1.04
CSTF3-202ENST00000431742 COX7BP24311 80 aa8.55□□□□□ -1.04
CSTF3-202ENST00000431742 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
CSTF3-202ENST00000431742 A0A087X002 238 aa8.54□□□□□ -1.04
CSTF3-202ENST00000431742 A0A1B0GWB2 263 aa8.54□□□□□ -1.04
CSTF3-202ENST00000431742 ZNF706Q9Y5V0 76 aaPredicted RBP8.54□□□□□ -1.04
CSTF3-202ENST00000431742 ANAPC11Q9NYG5 84 aa8.53□□□□□ -1.04
CSTF3-202ENST00000431742 DHRS4-AS1Q9P1J3 65 aa8.53□□□□□ -1.04
CSTF3-202ENST00000431742 LINC00483Q53H64 154 aa8.52□□□□□ -1.05
CSTF3-202ENST00000431742 RAB37Q96AX2 223 aa8.52□□□□□ -1.05
CSTF3-202ENST00000431742 CRYGAP11844 174 aa8.51□□□□□ -1.05
CSTF3-202ENST00000431742 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
CSTF3-202ENST00000431742 PRO1854Q9UHT4 67 aa8.49□□□□□ -1.05
CSTF3-202ENST00000431742 TSTD3H0UI37 97 aa8.48□□□□□ -1.05
CSTF3-202ENST00000431742 H7C2G1 150 aa8.48□□□□□ -1.05
CSTF3-202ENST00000431742 BVES-AS1Q5T3Y7 98 aa8.48□□□□□ -1.05
CSTF3-202ENST00000431742 ST20-AS1Q8NBB2 130 aa8.48□□□□□ -1.05
CSTF3-202ENST00000431742 NHP2Q9NX24 153 aaKnown RBP8.48□□□□□ -1.05
CSTF3-202ENST00000431742 VAMP3Q15836 100 aa8.47□□□□□ -1.05
CSTF3-202ENST00000431742 GAGE2AQ6NT46 116 aa8.47□□□□□ -1.05
CSTF3-202ENST00000431742 K7ERJ3 54 aa8.46□□□□□ -1.06
CSTF3-202ENST00000431742 SPRR1BP22528 89 aa8.46□□□□□ -1.06
CSTF3-202ENST00000431742 CTAG1AP78358 180 aa8.46□□□□□ -1.06
CSTF3-202ENST00000431742 XP32Q5T750 250 aa8.45□□□□□ -1.06
CSTF3-202ENST00000431742 LINC00575Q6W349 94 aa8.45□□□□□ -1.06
CSTF3-202ENST00000431742 GHRHP01286 108 aa8.44□□□□□ -1.06
CSTF3-202ENST00000431742 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
CSTF3-202ENST00000431742 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
CSTF3-202ENST00000431742 IGLV5-48A0A075B6I7 105 aa8.43□□□□□ -1.06
CSTF3-202ENST00000431742 M0R143 59 aa8.43□□□□□ -1.06
CSTF3-202ENST00000431742 LINC01547P58512 204 aaPredicted RBP8.42□□□□□ -1.06
CSTF3-202ENST00000431742 Q1RN00 199 aa8.42□□□□□ -1.06
CSTF3-202ENST00000431742 SLC25A20O43772 301 aa8.41□□□□□ -1.06
CSTF3-202ENST00000431742 hADV29S1A0JD25 119 aa8.4□□□□□ -1.06
CSTF3-202ENST00000431742 H0YGX0 51 aa8.4□□□□□ -1.06
CSTF3-202ENST00000431742 TRIAP1O43715 76 aa8.4□□□□□ -1.06
CSTF3-202ENST00000431742 TSPAN13O95857 204 aa8.4□□□□□ -1.06
CSTF3-202ENST00000431742 HMCN2Q8NDA2 5059 aa8.39□□□□□ -1.07
CSTF3-202ENST00000431742 TEX49A0A1B0GTD5 131 aa8.38□□□□□ -1.07
CSTF3-202ENST00000431742 FAM218AQ96MZ4 157 aa8.38□□□□□ -1.07
CSTF3-202ENST00000431742 IGLV9-49A0A0B4J1Y8 123 aa8.37□□□□□ -1.07
CSTF3-202ENST00000431742 Q6ZQY7 126 aa8.37□□□□□ -1.07
CSTF3-202ENST00000431742 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
CSTF3-202ENST00000431742 LINC00304Q8N9R0 145 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms