RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 IGF2RP11717 2491 aa11.08□□□□□ -0.64
RIF1-204ENST00000430328 C9orf92A6NGG3 77 aa11.07□□□□□ -0.64
RIF1-204ENST00000430328 COL4A4P53420 1690 aaPredicted RBP11.07□□□□□ -0.64
RIF1-204ENST00000430328 LINC00304Q8N9R0 145 aa11.06□□□□□ -0.64
RIF1-204ENST00000430328 IGFL1Q6UW32 110 aa11.06□□□□□ -0.64
RIF1-204ENST00000430328 CHD8Q9HCK8 2581 aa11.06□□□□□ -0.64
RIF1-204ENST00000430328 BPTFQ12830 3046 aa11.05□□□□□ -0.64
RIF1-204ENST00000430328 CAMK2N1Q7Z7J9 78 aa11.04□□□□□ -0.64
RIF1-204ENST00000430328 NBDYA0A0U1RRE5 68 aa11.04□□□□□ -0.64
RIF1-204ENST00000430328 FAM168BA1KXE4 195 aa11.03□□□□□ -0.64
RIF1-204ENST00000430328 USP9YO00507 2555 aaPredicted RBP11.01□□□□□ -0.65
RIF1-204ENST00000430328 KCNQ1DNQ9H478 68 aa11□□□□□ -0.65
RIF1-204ENST00000430328 PLA2G2DQ9UNK4 145 aa10.98□□□□□ -0.65
RIF1-204ENST00000430328 Q8N1X5 172 aa10.97□□□□□ -0.65
RIF1-204ENST00000430328 DMAC1Q96GE9 116 aa10.96□□□□□ -0.65
RIF1-204ENST00000430328 IGLV1-50A0A075B6I6 118 aa10.96□□□□□ -0.65
RIF1-204ENST00000430328 LINC00588Q9Y4M8 146 aa10.95□□□□□ -0.66
RIF1-204ENST00000430328 LINC00528Q8N1L1 170 aa10.94□□□□□ -0.66
RIF1-204ENST00000430328 DNAH10OSP0CZ25 163 aa10.94□□□□□ -0.66
RIF1-204ENST00000430328 CDSNQ15517 529 aa10.93□□□□□ -0.66
RIF1-204ENST00000430328 ZNF861PO60384 105 aa10.93□□□□□ -0.66
RIF1-204ENST00000430328 A0A1B0GU33 70 aa10.92□□□□□ -0.66
RIF1-204ENST00000430328 Q8N377 158 aa10.92□□□□□ -0.66
RIF1-204ENST00000430328 LITAFQ99732 161 aa10.91□□□□□ -0.66
RIF1-204ENST00000430328 C9orf163Q8N9P6 203 aa10.9□□□□□ -0.66
RIF1-204ENST00000430328 KRTAP10-9P60411 292 aa10.89□□□□□ -0.67
RIF1-204ENST00000430328 FASNP49327 2511 aaKnown RBP10.88□□□□□ -0.67
RIF1-204ENST00000430328 Q75L30 129 aa10.87□□□□□ -0.67
RIF1-204ENST00000430328 C15orf56Q8N910 161 aa10.87□□□□□ -0.67
RIF1-204ENST00000430328 EPG5Q9HCE0 2579 aa10.86□□□□□ -0.67
RIF1-204ENST00000430328 TLX1NBP0CAT3 122 aa10.83□□□□□ -0.68
RIF1-204ENST00000430328 MUC22E2RYF6 1773 aaPredicted RBP10.83□□□□□ -0.68
RIF1-204ENST00000430328 SPINK7P58062 85 aa10.82□□□□□ -0.68
RIF1-204ENST00000430328 Q8NAQ8 132 aa10.81□□□□□ -0.68
RIF1-204ENST00000430328 PRR26Q8N8Z3 221 aa10.81□□□□□ -0.68
RIF1-204ENST00000430328 ANKRD11Q6UB99 2663 aaPredicted RBP10.8□□□□□ -0.68
RIF1-204ENST00000430328 CSAG1Q6PB30 78 aa10.78□□□□□ -0.68
RIF1-204ENST00000430328 A0A0G2JQZ4 141 aa10.75□□□□□ -0.69
RIF1-204ENST00000430328 A0A1W2PNN7 141 aa10.75□□□□□ -0.69
RIF1-204ENST00000430328 HRES1P13985 223 aa10.75□□□□□ -0.69
RIF1-204ENST00000430328 IGLV7-46A0A075B6I9 117 aa10.71□□□□□ -0.69
RIF1-204ENST00000430328 PRAC1Q96KF2 57 aa10.71□□□□□ -0.7
RIF1-204ENST00000430328 WWC2-AS2Q96NR7 200 aa10.71□□□□□ -0.7
RIF1-204ENST00000430328 Q6ZSA8 131 aa10.7□□□□□ -0.7
RIF1-204ENST00000430328 ANAPC11Q9NYG5 84 aa10.7□□□□□ -0.7
RIF1-204ENST00000430328 IGLV7-43P04211 117 aa10.68□□□□□ -0.7
RIF1-204ENST00000430328 OCR1Q9BZK8 76 aa10.68□□□□□ -0.7
RIF1-204ENST00000430328 A0A1W2PPR1 153 aa10.68□□□□□ -0.7
RIF1-204ENST00000430328 M0R2T5 61 aa10.68□□□□□ -0.7
RIF1-204ENST00000430328 LINC01558Q9Y6Z2 57 aa10.66□□□□□ -0.7
RIF1-204ENST00000430328 SPRR4Q96PI1 79 aa10.65□□□□□ -0.7
RIF1-204ENST00000430328 KRTAP16-1A8MUX0 517 aa10.64□□□□□ -0.71
RIF1-204ENST00000430328 EIF4EBP3O60516 100 aaPredicted RBP10.62□□□□□ -0.71
RIF1-204ENST00000430328 PSORS1C2Q9UIG4 136 aa10.62□□□□□ -0.71
RIF1-204ENST00000430328 A0A1W2PNM2 257 aa10.62□□□□□ -0.71
RIF1-204ENST00000430328 SMR3BP02814 79 aaPredicted RBP10.61□□□□□ -0.71
RIF1-204ENST00000430328 PRR34Q9NV39 138 aa10.61□□□□□ -0.71
RIF1-204ENST00000430328 PRRC2CQ9Y520 2896 aaKnown RBP10.6□□□□□ -0.71
RIF1-204ENST00000430328 H1FX-AS1Q4G0G2 97 aa10.58□□□□□ -0.72
RIF1-204ENST00000430328 S4R3F8 94 aa10.58□□□□□ -0.72
RIF1-204ENST00000430328 A0A087WTM6 91 aa10.57□□□□□ -0.72
RIF1-204ENST00000430328 Q8N9P0 234 aaPredicted RBP10.56□□□□□ -0.72
RIF1-204ENST00000430328 ROMO1P60602 79 aa10.55□□□□□ -0.72
RIF1-204ENST00000430328 FAM229BQ4G0N7 80 aa10.54□□□□□ -0.72
RIF1-204ENST00000430328 R4GN34 69 aa10.54□□□□□ -0.72
RIF1-204ENST00000430328 DMBT1Q9UGM3 2413 aaPredicted RBP10.52□□□□□ -0.73
RIF1-204ENST00000430328 SRCAPQ6ZRS2 3230 aa10.52□□□□□ -0.73
RIF1-204ENST00000430328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.49□□□□□ -0.73
RIF1-204ENST00000430328 C19orf73Q9NVV2 129 aa10.48□□□□□ -0.73
RIF1-204ENST00000430328 Q5VV11 94 aa10.48□□□□□ -0.73
RIF1-204ENST00000430328 Q5XG85 94 aa10.48□□□□□ -0.73
RIF1-204ENST00000430328 CENPFP49454 3210 aa10.46□□□□□ -0.73
RIF1-204ENST00000430328 TNP2Q05952 138 aa10.46□□□□□ -0.74
RIF1-204ENST00000430328 KRTAP24-1Q3LI83 254 aa10.45□□□□□ -0.74
RIF1-204ENST00000430328 RPL37P61927 97 aaKnown RBP10.44□□□□□ -0.74
RIF1-204ENST00000430328 AKAP13Q12802 2813 aa10.44□□□□□ -0.74
RIF1-204ENST00000430328 CNBPP62633 177 aaKnown RBP10.43□□□□□ -0.74
RIF1-204ENST00000430328 HECTD1Q9ULT8 2610 aa10.42□□□□□ -0.74
RIF1-204ENST00000430328 PLAC4Q8WY50 150 aa10.42□□□□□ -0.74
RIF1-204ENST00000430328 LINC00612Q8N6U2 182 aa10.41□□□□□ -0.74
RIF1-204ENST00000430328 FP248Q71RG6 208 aaPredicted RBP10.4□□□□□ -0.74
RIF1-204ENST00000430328 MGAM2Q2M2H8 2515 aa10.4□□□□□ -0.74
RIF1-204ENST00000430328 ZCCHC13Q8WW36 166 aaKnown RBP10.38□□□□□ -0.75
RIF1-204ENST00000430328 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
RIF1-204ENST00000430328 COL4A2P08572 1712 aa10.34□□□□□ -0.75
RIF1-204ENST00000430328 ASB16-AS1Q495Z4 193 aa10.34□□□□□ -0.75
RIF1-204ENST00000430328 STAB1Q9NY15 2570 aa10.3□□□□□ -0.76
RIF1-204ENST00000430328 K7EIL1 84 aa10.3□□□□□ -0.76
RIF1-204ENST00000430328 ATRQ13535 2644 aa10.3□□□□□ -0.76
RIF1-204ENST00000430328 NBEAL1Q6ZS30 2694 aa10.28□□□□□ -0.76
RIF1-204ENST00000430328 KLK9Q2XQG4 91 aa10.28□□□□□ -0.76
RIF1-204ENST00000430328 KRTAP10-11P60412 298 aa10.27□□□□□ -0.77
RIF1-204ENST00000430328 MAST4O15021 2626 aa10.26□□□□□ -0.77
RIF1-204ENST00000430328 MMP24-AS1A0A0U1RRL7 71 aa10.25□□□□□ -0.77
RIF1-204ENST00000430328 Q5W150 140 aa10.25□□□□□ -0.77
RIF1-204ENST00000430328 CEP295Q9C0D2 2601 aa10.24□□□□□ -0.77
RIF1-204ENST00000430328 CFAP46Q8IYW2 2715 aa10.24□□□□□ -0.77
RIF1-204ENST00000430328 M0QZ58 72 aa10.24□□□□□ -0.77
RIF1-204ENST00000430328 CASC10Q5T4H9 136 aa10.21□□□□□ -0.77
RIF1-204ENST00000430328 CENPEQ02224 2701 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms