RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 Q5VSD8 79 aa11.93□□□□□ -0.5
PTCD1-203ENST00000430029 NHP2Q9NX24 153 aaKnown RBP11.93□□□□□ -0.5
PTCD1-203ENST00000430029 FAM229AH3BQW9 127 aa11.92□□□□□ -0.5
PTCD1-203ENST00000430029 RPL13AP40429 203 aaKnown RBP11.92□□□□□ -0.5
PTCD1-203ENST00000430029 RAB37Q96AX2 223 aa11.92□□□□□ -0.5
PTCD1-203ENST00000430029 A0A1B0GWB2 263 aa11.91□□□□□ -0.5
PTCD1-203ENST00000430029 K7ERJ3 54 aa11.91□□□□□ -0.5
PTCD1-203ENST00000430029 M0R143 59 aa11.91□□□□□ -0.5
PTCD1-203ENST00000430029 BCE1O60756 84 aa11.91□□□□□ -0.5
PTCD1-203ENST00000430029 KRTAP4-16G5E9R7 235 aaPredicted RBP11.9□□□□□ -0.5
PTCD1-203ENST00000430029 ZNF73O43830 326 aaPredicted RBP11.89□□□□□ -0.51
PTCD1-203ENST00000430029 SMIM11BQ8TCY0 68 aa11.89□□□□□ -0.51
PTCD1-203ENST00000430029 IGLV7-43P04211 117 aa11.88□□□□□ -0.51
PTCD1-203ENST00000430029 PRO1854Q9UHT4 67 aa11.88□□□□□ -0.51
PTCD1-203ENST00000430029 PLA2G1BP04054 148 aaKnown RBP11.87□□□□□ -0.51
PTCD1-203ENST00000430029 FAM19A1Q7Z5A9 133 aa11.87□□□□□ -0.51
PTCD1-203ENST00000430029 PCP4L1A6NKN8 68 aa11.86□□□□□ -0.51
PTCD1-203ENST00000430029 H7C2G1 150 aa11.86□□□□□ -0.51
PTCD1-203ENST00000430029 C6orf99Q4VX62 202 aa11.86□□□□□ -0.51
PTCD1-203ENST00000430029 KRTAP13-1Q8IUC0 172 aa11.86□□□□□ -0.51
PTCD1-203ENST00000430029 CBY1Q9Y3M2 126 aa11.86□□□□□ -0.51
PTCD1-203ENST00000430029 PRLHP81277 87 aa11.85□□□□□ -0.51
PTCD1-203ENST00000430029 KRTAP4-5Q9BYR2 181 aa11.85□□□□□ -0.51
PTCD1-203ENST00000430029 PKHD1L1Q86WI1 4243 aa11.84□□□□□ -0.51
PTCD1-203ENST00000430029 ETDCA0A1B0GVM5 59 aa11.84□□□□□ -0.51
PTCD1-203ENST00000430029 B5MCH6 92 aa11.84□□□□□ -0.51
PTCD1-203ENST00000430029 BATFQ16520 125 aa11.84□□□□□ -0.51
PTCD1-203ENST00000430029 DIRC1Q969H9 104 aa11.84□□□□□ -0.51
PTCD1-203ENST00000430029 UBE2AP49459 152 aa11.83□□□□□ -0.52
PTCD1-203ENST00000430029 ZNF861PO60384 105 aa11.82□□□□□ -0.52
PTCD1-203ENST00000430029 RPL28P46779 137 aaKnown RBP11.82□□□□□ -0.52
PTCD1-203ENST00000430029 H0Y9J4 135 aa11.79□□□□□ -0.52
PTCD1-203ENST00000430029 TSPAN13O95857 204 aa11.79□□□□□ -0.52
PTCD1-203ENST00000430029 COX7BP24311 80 aa11.79□□□□□ -0.52
PTCD1-203ENST00000430029 Q1RN00 199 aa11.79□□□□□ -0.52
PTCD1-203ENST00000430029 Q6ZRX8 168 aa11.79□□□□□ -0.52
PTCD1-203ENST00000430029 SNHG12Q9BXW3 62 aa11.79□□□□□ -0.52
PTCD1-203ENST00000430029 TRBV7-6A0A0J9YX20 115 aa11.78□□□□□ -0.52
PTCD1-203ENST00000430029 ELOF1P60002 83 aaKnown RBP11.78□□□□□ -0.52
PTCD1-203ENST00000430029 Q9BRP9 147 aa11.78□□□□□ -0.52
PTCD1-203ENST00000430029 SMCR5Q8TEV8 140 aa11.77□□□□□ -0.53
PTCD1-203ENST00000430029 ABCA13Q86UQ4 5058 aa11.75□□□□□ -0.53
PTCD1-203ENST00000430029 SPINK6Q6UWN8 80 aa11.75□□□□□ -0.53
PTCD1-203ENST00000430029 HIGD2AQ9BW72 106 aa11.75□□□□□ -0.53
PTCD1-203ENST00000430029 TRIAP1O43715 76 aa11.74□□□□□ -0.53
PTCD1-203ENST00000430029 ERC2-IT1O76042 136 aa11.74□□□□□ -0.53
PTCD1-203ENST00000430029 VAMP3Q15836 100 aa11.72□□□□□ -0.53
PTCD1-203ENST00000430029 SRRM2Q9UQ35 2752 aaKnown RBP11.71□□□□□ -0.53
PTCD1-203ENST00000430029 PSMB2P49721 201 aa11.7□□□□□ -0.54
PTCD1-203ENST00000430029 NAA38Q9BRA0 125 aaKnown RBP11.7□□□□□ -0.54
PTCD1-203ENST00000430029 TAX1BP3O14907 124 aa11.69□□□□□ -0.54
PTCD1-203ENST00000430029 INAFM2P0DMQ5 153 aa11.69□□□□□ -0.54
PTCD1-203ENST00000430029 LINC00575Q6W349 94 aa11.69□□□□□ -0.54
PTCD1-203ENST00000430029 DHRS4-AS1Q9P1J3 65 aa11.69□□□□□ -0.54
PTCD1-203ENST00000430029 H0YGX0 51 aa11.67□□□□□ -0.54
PTCD1-203ENST00000430029 FAM218AQ96MZ4 157 aa11.67□□□□□ -0.54
PTCD1-203ENST00000430029 ST20-AS1Q8NBB2 130 aa11.65□□□□□ -0.54
PTCD1-203ENST00000430029 CLEC2BQ92478 149 aa11.64□□□□□ -0.55
PTCD1-203ENST00000430029 KRTAP1-4P0C5Y4 121 aa11.63□□□□□ -0.55
PTCD1-203ENST00000430029 COL5A1-AS1Q5SY13 56 aa11.63□□□□□ -0.55
PTCD1-203ENST00000430029 SPRR4Q96PI1 79 aa11.63□□□□□ -0.55
PTCD1-203ENST00000430029 hADV29S1A0JD25 119 aa11.62□□□□□ -0.55
PTCD1-203ENST00000430029 C9orf118A6NHY6 69 aa11.62□□□□□ -0.55
PTCD1-203ENST00000430029 H3BUT2 72 aa11.62□□□□□ -0.55
PTCD1-203ENST00000430029 COX6CP09669 75 aa11.62□□□□□ -0.55
PTCD1-203ENST00000430029 SLC25A20O43772 301 aa11.61□□□□□ -0.55
PTCD1-203ENST00000430029 SCGB1C2P0DMR2 95 aa11.61□□□□□ -0.55
PTCD1-203ENST00000430029 ANAPC11Q9NYG5 84 aa11.61□□□□□ -0.55
PTCD1-203ENST00000430029 FLG2Q5D862 2391 aaPredicted RBP11.6□□□□□ -0.55
PTCD1-203ENST00000430029 FAT3Q8TDW7 4589 aa11.59□□□□□ -0.55
PTCD1-203ENST00000430029 LINC01547P58512 204 aaPredicted RBP11.58□□□□□ -0.56
PTCD1-203ENST00000430029 GAGE2AQ6NT46 116 aa11.58□□□□□ -0.56
PTCD1-203ENST00000430029 ZNF706Q9Y5V0 76 aaPredicted RBP11.58□□□□□ -0.56
PTCD1-203ENST00000430029 A0A1B0GX51 115 aa11.57□□□□□ -0.56
PTCD1-203ENST00000430029 Q6ZQY7 126 aa11.57□□□□□ -0.56
PTCD1-203ENST00000430029 LRP1Q07954 4544 aaKnown RBP11.57□□□□□ -0.56
PTCD1-203ENST00000430029 LST1O00453 97 aa11.55□□□□□ -0.56
PTCD1-203ENST00000430029 LINC00483Q53H64 154 aa11.55□□□□□ -0.56
PTCD1-203ENST00000430029 DEFB105AQ8NG35 78 aa11.55□□□□□ -0.56
PTCD1-203ENST00000430029 IGLV5-48A0A075B6I7 105 aa11.54□□□□□ -0.56
PTCD1-203ENST00000430029 A0A1W2PPM0 123 aa11.54□□□□□ -0.56
PTCD1-203ENST00000430029 TCL1BO95988 128 aa11.54□□□□□ -0.56
PTCD1-203ENST00000430029 SPRR1BP22528 89 aa11.54□□□□□ -0.56
PTCD1-203ENST00000430029 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.54□□□□□ -0.56
PTCD1-203ENST00000430029 A0A087X002 238 aa11.52□□□□□ -0.57
PTCD1-203ENST00000430029 Q8N377 158 aa11.52□□□□□ -0.57
PTCD1-203ENST00000430029 MYCBP2O75592 4640 aa11.51□□□□□ -0.57
PTCD1-203ENST00000430029 SNCGO76070 127 aa11.51□□□□□ -0.57
PTCD1-203ENST00000430029 LINC01600Q96MT4 127 aa11.51□□□□□ -0.57
PTCD1-203ENST00000430029 TEX49A0A1B0GTD5 131 aa11.5□□□□□ -0.57
PTCD1-203ENST00000430029 TRACP01848 142 aa11.5□□□□□ -0.57
PTCD1-203ENST00000430029 FAM229BQ4G0N7 80 aa11.5□□□□□ -0.57
PTCD1-203ENST00000430029 LYRM7Q5U5X0 104 aa11.5□□□□□ -0.57
PTCD1-203ENST00000430029 PRR26Q8N8Z3 221 aa11.5□□□□□ -0.57
PTCD1-203ENST00000430029 FABP2P12104 132 aa11.49□□□□□ -0.57
PTCD1-203ENST00000430029 KRTAP13-2Q52LG2 175 aa11.49□□□□□ -0.57
PTCD1-203ENST00000430029 ATXN8Q156A1 80 aa11.48□□□□□ -0.57
PTCD1-203ENST00000430029 SMIM29Q86T20 159 aa11.48□□□□□ -0.57
PTCD1-203ENST00000430029 TNXBP22105 4242 aa11.47□□□□□ -0.57
PTCD1-203ENST00000430029 DNAL4O96015 105 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms