RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 LINC00336Q6ZUF6 198 aa8.41□□□□□ -1.06
LDB3-205ENST00000429277 A0A096LNT2 108 aa8.4□□□□□ -1.06
LDB3-205ENST00000429277 SPTBN4Q9H254 2564 aa8.4□□□□□ -1.07
LDB3-205ENST00000429277 Q8N377 158 aa8.4□□□□□ -1.07
LDB3-205ENST00000429277 KRTAP10-11P60412 298 aa8.39□□□□□ -1.07
LDB3-205ENST00000429277 SPINT4Q6UDR6 99 aa8.39□□□□□ -1.07
LDB3-205ENST00000429277 DSCR10P59022 87 aa8.38□□□□□ -1.07
LDB3-205ENST00000429277 C9orf129Q5T035 196 aaKnown RBP8.38□□□□□ -1.07
LDB3-205ENST00000429277 FASNP49327 2511 aaKnown RBP8.38□□□□□ -1.07
LDB3-205ENST00000429277 WDR87Q6ZQQ6 2873 aa8.37□□□□□ -1.07
LDB3-205ENST00000429277 PCSK5Q92824 1860 aa8.37□□□□□ -1.07
LDB3-205ENST00000429277 CNBPP62633 177 aaKnown RBP8.37□□□□□ -1.07
LDB3-205ENST00000429277 GIG44P09565 113 aaPredicted RBP8.36□□□□□ -1.07
LDB3-205ENST00000429277 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
LDB3-205ENST00000429277 A8MUN3 132 aa8.36□□□□□ -1.07
LDB3-205ENST00000429277 IGLV7-43P04211 117 aa8.35□□□□□ -1.07
LDB3-205ENST00000429277 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
LDB3-205ENST00000429277 OBSCN-AS1Q96MR7 158 aa8.33□□□□□ -1.08
LDB3-205ENST00000429277 RBM12B-AS1Q9P1G2 102 aa8.33□□□□□ -1.08
LDB3-205ENST00000429277 SPRR4Q96PI1 79 aa8.32□□□□□ -1.08
LDB3-205ENST00000429277 ZNF575Q86XF7 245 aa8.31□□□□□ -1.08
LDB3-205ENST00000429277 SPANXA2-OT1Q8N9U9 137 aa8.31□□□□□ -1.08
LDB3-205ENST00000429277 ACANP16112 2415 aa8.31□□□□□ -1.08
LDB3-205ENST00000429277 IGLV5-37A0A075B6J1 123 aa8.31□□□□□ -1.08
LDB3-205ENST00000429277 EIF4EBP3O60516 100 aaPredicted RBP8.3□□□□□ -1.08
LDB3-205ENST00000429277 APLNQ9ULZ1 77 aa8.29□□□□□ -1.08
LDB3-205ENST00000429277 POLQO75417 2590 aa8.28□□□□□ -1.08
LDB3-205ENST00000429277 PSORS1C2Q9UIG4 136 aa8.28□□□□□ -1.08
LDB3-205ENST00000429277 KRTAP10-3P60369 221 aa8.27□□□□□ -1.09
LDB3-205ENST00000429277 CD164Q04900 197 aa8.25□□□□□ -1.09
LDB3-205ENST00000429277 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
LDB3-205ENST00000429277 H7BZZ5 65 aa8.25□□□□□ -1.09
LDB3-205ENST00000429277 IGLV5-48A0A075B6I7 105 aa8.25□□□□□ -1.09
LDB3-205ENST00000429277 A0A1W2PNN7 141 aa8.25□□□□□ -1.09
LDB3-205ENST00000429277 A0A1W2PNM2 257 aa8.23□□□□□ -1.09
LDB3-205ENST00000429277 FAM104AQ969W3 186 aa8.23□□□□□ -1.09
LDB3-205ENST00000429277 CDC42SE1Q9NRR8 79 aa8.19□□□□□ -1.1
LDB3-205ENST00000429277 SMR3BP02814 79 aaPredicted RBP8.18□□□□□ -1.1
LDB3-205ENST00000429277 KRTAP1-3Q8IUG1 177 aa8.16□□□□□ -1.1
LDB3-205ENST00000429277 ANAPC11Q9NYG5 84 aa8.16□□□□□ -1.1
LDB3-205ENST00000429277 A0A0G2JQZ4 141 aa8.15□□□□□ -1.11
LDB3-205ENST00000429277 CASC10Q5T4H9 136 aa8.14□□□□□ -1.11
LDB3-205ENST00000429277 KTN1-AS1Q86SY8 53 aa8.14□□□□□ -1.11
LDB3-205ENST00000429277 LCA10Q71F78 164 aa8.13□□□□□ -1.11
LDB3-205ENST00000429277 KRTAP1-1Q07627 177 aa8.13□□□□□ -1.11
LDB3-205ENST00000429277 EPG5Q9HCE0 2579 aa8.12□□□□□ -1.11
LDB3-205ENST00000429277 FAM229BQ4G0N7 80 aa8.12□□□□□ -1.11
LDB3-205ENST00000429277 WIPF1O43516 503 aa8.08□□□□□ -1.12
LDB3-205ENST00000429277 Q6ZSA8 131 aa8.08□□□□□ -1.12
LDB3-205ENST00000429277 Q8N1X5 172 aa8.08□□□□□ -1.12
LDB3-205ENST00000429277 OCR1Q9BZK8 76 aa8.08□□□□□ -1.12
LDB3-205ENST00000429277 LINC01554Q52M75 96 aa8.05□□□□□ -1.12
LDB3-205ENST00000429277 Q1T7F1 81 aa8.04□□□□□ -1.12
LDB3-205ENST00000429277 IGLV7-46A0A075B6I9 117 aa8.04□□□□□ -1.12
LDB3-205ENST00000429277 TNP2Q05952 138 aa8.04□□□□□ -1.12
LDB3-205ENST00000429277 A0A0D9SG42 100 aa8.03□□□□□ -1.12
LDB3-205ENST00000429277 MGAM2Q2M2H8 2515 aa8.02□□□□□ -1.13
LDB3-205ENST00000429277 LUZP6Q538Z0 58 aa8.01□□□□□ -1.13
LDB3-205ENST00000429277 FLNBO75369 2602 aaKnown RBP8□□□□□ -1.13
LDB3-205ENST00000429277 USP24Q9UPU5 2620 aa8□□□□□ -1.13
LDB3-205ENST00000429277 PLAC8Q9NZF1 115 aa8□□□□□ -1.13
LDB3-205ENST00000429277 A0A1B0GU33 70 aa7.98□□□□□ -1.13
LDB3-205ENST00000429277 PRR26Q8N8Z3 221 aa7.98□□□□□ -1.13
LDB3-205ENST00000429277 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
LDB3-205ENST00000429277 HRES1P13985 223 aa7.96□□□□□ -1.13
LDB3-205ENST00000429277 SPRR1AP35321 89 aa7.96□□□□□ -1.14
LDB3-205ENST00000429277 CENPFP49454 3210 aa7.96□□□□□ -1.14
LDB3-205ENST00000429277 CAMK2N1Q7Z7J9 78 aa7.95□□□□□ -1.14
LDB3-205ENST00000429277 EP400Q96L91 3159 aa7.95□□□□□ -1.14
LDB3-205ENST00000429277 ZCCHC13Q8WW36 166 aaKnown RBP7.95□□□□□ -1.14
LDB3-205ENST00000429277 LINC00483Q53H64 154 aa7.95□□□□□ -1.14
LDB3-205ENST00000429277 HECTD1Q9ULT8 2610 aa7.94□□□□□ -1.14
LDB3-205ENST00000429277 SPRR1BP22528 89 aa7.94□□□□□ -1.14
LDB3-205ENST00000429277 Q75L30 129 aa7.94□□□□□ -1.14
LDB3-205ENST00000429277 MMP24-AS1A0A0U1RRL7 71 aa7.92□□□□□ -1.14
LDB3-205ENST00000429277 CSAG1Q6PB30 78 aa7.92□□□□□ -1.14
LDB3-205ENST00000429277 CR1P17927 2039 aa7.91□□□□□ -1.14
LDB3-205ENST00000429277 LINC01558Q9Y6Z2 57 aa7.91□□□□□ -1.14
LDB3-205ENST00000429277 DMAC1Q96GE9 116 aa7.9□□□□□ -1.14
LDB3-205ENST00000429277 S4R3F8 94 aa7.85□□□□□ -1.15
LDB3-205ENST00000429277 M0R2T5 61 aa7.85□□□□□ -1.15
LDB3-205ENST00000429277 LINC00472Q9H8W2 130 aa7.83□□□□□ -1.16
LDB3-205ENST00000429277 SEC61BP60468 96 aaKnown RBP7.82□□□□□ -1.16
LDB3-205ENST00000429277 Q8N9P0 234 aaPredicted RBP7.82□□□□□ -1.16
LDB3-205ENST00000429277 Q5W150 140 aa7.81□□□□□ -1.16
LDB3-205ENST00000429277 FLNAP21333 2647 aaKnown RBP7.8□□□□□ -1.16
LDB3-205ENST00000429277 MAST4O15021 2626 aa7.78□□□□□ -1.16
LDB3-205ENST00000429277 SRCAPQ6ZRS2 3230 aa7.78□□□□□ -1.16
LDB3-205ENST00000429277 SPINK7P58062 85 aa7.77□□□□□ -1.17
LDB3-205ENST00000429277 ATRQ13535 2644 aa7.75□□□□□ -1.17
LDB3-205ENST00000429277 Q8NDZ9 215 aa7.75□□□□□ -1.17
LDB3-205ENST00000429277 ITPR3Q14573 2671 aa7.74□□□□□ -1.17
LDB3-205ENST00000429277 R4GN34 69 aa7.73□□□□□ -1.17
LDB3-205ENST00000429277 HELZ2Q9BYK8 2649 aaKnown RBP7.73□□□□□ -1.17
LDB3-205ENST00000429277 FP248Q71RG6 208 aaPredicted RBP7.71□□□□□ -1.18
LDB3-205ENST00000429277 KRTAP26-1Q6PEX3 210 aa7.7□□□□□ -1.18
LDB3-205ENST00000429277 LCE6AA0A183 80 aa7.69□□□□□ -1.18
LDB3-205ENST00000429277 BPTFQ12830 3046 aa7.68□□□□□ -1.18
LDB3-205ENST00000429277 STAB1Q9NY15 2570 aa7.67□□□□□ -1.18
LDB3-205ENST00000429277 Q5VSD8 79 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms