RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 C4orf48Q5BLP8 95 aa10.52□□□□□ -0.73
PSPC1-202ENST00000427943 Q6ZRX8 168 aa10.52□□□□□ -0.73
PSPC1-202ENST00000427943 TRAV23DV6A0A075B6W5 121 aa10.51□□□□□ -0.73
PSPC1-202ENST00000427943 CDIP1Q9H305 208 aa10.51□□□□□ -0.73
PSPC1-202ENST00000427943 MUC2Q02817 5179 aa10.51□□□□□ -0.73
PSPC1-202ENST00000427943 IGLV9-49A0A0B4J1Y8 123 aa10.49□□□□□ -0.73
PSPC1-202ENST00000427943 MOBPQ13875 183 aa10.49□□□□□ -0.73
PSPC1-202ENST00000427943 LINC01545Q5VT33 79 aa10.49□□□□□ -0.73
PSPC1-202ENST00000427943 LITAFQ99732 161 aa10.47□□□□□ -0.73
PSPC1-202ENST00000427943 ZNF73O43830 326 aaPredicted RBP10.46□□□□□ -0.73
PSPC1-202ENST00000427943 PET117Q6UWS5 81 aa10.46□□□□□ -0.73
PSPC1-202ENST00000427943 LINC00308Q8TCZ7 52 aa10.45□□□□□ -0.74
PSPC1-202ENST00000427943 TTTY13Q9BZ97 58 aa10.45□□□□□ -0.74
PSPC1-202ENST00000427943 ZNF815PA8K554 130 aa10.44□□□□□ -0.74
PSPC1-202ENST00000427943 C3orf79P0CE67 100 aa10.44□□□□□ -0.74
PSPC1-202ENST00000427943 JOSD1Q15040 202 aaPredicted RBP10.44□□□□□ -0.74
PSPC1-202ENST00000427943 A0A0U1RQV1 116 aa10.43□□□□□ -0.74
PSPC1-202ENST00000427943 TIMM17BO60830 172 aa10.43□□□□□ -0.74
PSPC1-202ENST00000427943 SPINK1P00995 79 aa10.43□□□□□ -0.74
PSPC1-202ENST00000427943 FP248Q71RG6 208 aaPredicted RBP10.43□□□□□ -0.74
PSPC1-202ENST00000427943 SPANXCQ9NY87 97 aa10.43□□□□□ -0.74
PSPC1-202ENST00000427943 OR13C6PQ8NH95 151 aa10.42□□□□□ -0.74
PSPC1-202ENST00000427943 KRTDAPP60985 99 aa10.41□□□□□ -0.74
PSPC1-202ENST00000427943 ST20-AS1Q8NBB2 130 aa10.41□□□□□ -0.74
PSPC1-202ENST00000427943 C9orf153Q5TBE3 101 aa10.4□□□□□ -0.74
PSPC1-202ENST00000427943 SSBP3-AS1Q7Z2R9 100 aa10.4□□□□□ -0.74
PSPC1-202ENST00000427943 HINT1P49773 126 aaPredicted RBP10.38□□□□□ -0.75
PSPC1-202ENST00000427943 COA6Q5JTJ3 125 aaKnown RBP10.38□□□□□ -0.75
PSPC1-202ENST00000427943 CBY1Q9Y3M2 126 aa10.38□□□□□ -0.75
PSPC1-202ENST00000427943 KRTAP13-3Q3SY46 172 aa10.36□□□□□ -0.75
PSPC1-202ENST00000427943 Q8N377 158 aa10.36□□□□□ -0.75
PSPC1-202ENST00000427943 SPANXDQ9BXN6 97 aa10.36□□□□□ -0.75
PSPC1-202ENST00000427943 RPS29P62273 56 aaKnown RBP10.34□□□□□ -0.75
PSPC1-202ENST00000427943 ANKRD39Q53RE8 183 aa10.34□□□□□ -0.75
PSPC1-202ENST00000427943 ATOH7Q8N100 152 aa10.34□□□□□ -0.75
PSPC1-202ENST00000427943 MUC17Q685J3 4493 aa10.34□□□□□ -0.75
PSPC1-202ENST00000427943 C20orf202A1L168 122 aa10.33□□□□□ -0.76
PSPC1-202ENST00000427943 SCGB1D4Q6XE38 83 aa10.33□□□□□ -0.76
PSPC1-202ENST00000427943 COX7BP24311 80 aa10.31□□□□□ -0.76
PSPC1-202ENST00000427943 C6orf99Q4VX62 202 aa10.31□□□□□ -0.76
PSPC1-202ENST00000427943 LINC00518Q8N0U6 118 aa10.31□□□□□ -0.76
PSPC1-202ENST00000427943 DHRS4-AS1Q9P1J3 65 aa10.31□□□□□ -0.76
PSPC1-202ENST00000427943 C5orf52A6NGY3 159 aa10.3□□□□□ -0.76
PSPC1-202ENST00000427943 SLC25A20O43772 301 aa10.3□□□□□ -0.76
PSPC1-202ENST00000427943 ELOF1P60002 83 aaKnown RBP10.3□□□□□ -0.76
PSPC1-202ENST00000427943 SPRR1BP22528 89 aa10.28□□□□□ -0.76
PSPC1-202ENST00000427943 PCP2Q8IVA1 136 aa10.27□□□□□ -0.77
PSPC1-202ENST00000427943 LCE2AQ5TA79 106 aaPredicted RBP10.26□□□□□ -0.77
PSPC1-202ENST00000427943 SLC25A34Q6PIV7 304 aa10.25□□□□□ -0.77
PSPC1-202ENST00000427943 HRCT1Q6UXD1 115 aa10.25□□□□□ -0.77
PSPC1-202ENST00000427943 FAT4Q6V0I7 4981 aa10.24□□□□□ -0.77
PSPC1-202ENST00000427943 IFITM1P13164 125 aa10.24□□□□□ -0.77
PSPC1-202ENST00000427943 MUSTN1Q8IVN3 82 aa10.24□□□□□ -0.77
PSPC1-202ENST00000427943 DEFB105AQ8NG35 78 aa10.24□□□□□ -0.77
PSPC1-202ENST00000427943 COPS9Q8WXC6 57 aa10.24□□□□□ -0.77
PSPC1-202ENST00000427943 LAMTOR3Q9UHA4 124 aa10.24□□□□□ -0.77
PSPC1-202ENST00000427943 A6NDN8 102 aa10.23□□□□□ -0.77
PSPC1-202ENST00000427943 TAL2Q16559 108 aa10.23□□□□□ -0.77
PSPC1-202ENST00000427943 Q1RN00 199 aa10.23□□□□□ -0.77
PSPC1-202ENST00000427943 ASB16-AS1Q495Z4 193 aa10.23□□□□□ -0.77
PSPC1-202ENST00000427943 Q6ZVH6 145 aa10.21□□□□□ -0.77
PSPC1-202ENST00000427943 TRBV7-6A0A0J9YX20 115 aa10.2□□□□□ -0.78
PSPC1-202ENST00000427943 A0A1B0GWB2 263 aa10.19□□□□□ -0.78
PSPC1-202ENST00000427943 AKR1D1P51857 326 aa10.19□□□□□ -0.78
PSPC1-202ENST00000427943 LIMD2Q9BT23 127 aa10.19□□□□□ -0.78
PSPC1-202ENST00000427943 SEC61BP60468 96 aaKnown RBP10.18□□□□□ -0.78
PSPC1-202ENST00000427943 HIST3H2BBQ8N257 126 aa10.18□□□□□ -0.78
PSPC1-202ENST00000427943 KRTAP4-1Q9BYQ7 146 aa10.18□□□□□ -0.78
PSPC1-202ENST00000427943 TEX49A0A1B0GTD5 131 aa10.17□□□□□ -0.78
PSPC1-202ENST00000427943 XP32Q5T750 250 aa10.17□□□□□ -0.78
PSPC1-202ENST00000427943 S100A2P29034 98 aa10.16□□□□□ -0.78
PSPC1-202ENST00000427943 SNRPEP62304 92 aaKnown RBP10.16□□□□□ -0.78
PSPC1-202ENST00000427943 HIST1H2BLQ99880 126 aa10.16□□□□□ -0.78
PSPC1-202ENST00000427943 LINC01547P58512 204 aaPredicted RBP10.15□□□□□ -0.78
PSPC1-202ENST00000427943 TRAV13-2A0A0B4J235 113 aa10.14□□□□□ -0.79
PSPC1-202ENST00000427943 SMIM29Q86T20 159 aa10.14□□□□□ -0.79
PSPC1-202ENST00000427943 SMIM11BQ8TCY0 68 aa10.14□□□□□ -0.79
PSPC1-202ENST00000427943 PRO1933Q9H354 126 aa10.14□□□□□ -0.79
PSPC1-202ENST00000427943 IGLV5-48A0A075B6I7 105 aa10.13□□□□□ -0.79
PSPC1-202ENST00000427943 H7C2G1 150 aa10.12□□□□□ -0.79
PSPC1-202ENST00000427943 A0A0G2JQZ4 141 aa10.11□□□□□ -0.79
PSPC1-202ENST00000427943 A4D1N5 150 aa10.1□□□□□ -0.79
PSPC1-202ENST00000427943 HSBP1L1C9JCN9 74 aa10.1□□□□□ -0.79
PSPC1-202ENST00000427943 CD164Q04900 197 aa10.1□□□□□ -0.79
PSPC1-202ENST00000427943 C9orf92A6NGG3 77 aa10.09□□□□□ -0.79
PSPC1-202ENST00000427943 KRTAP9-2Q9BYQ4 174 aa10.09□□□□□ -0.79
PSPC1-202ENST00000427943 NHP2Q9NX24 153 aaKnown RBP10.08□□□□□ -0.8
PSPC1-202ENST00000427943 S100A6P06703 90 aa10.07□□□□□ -0.8
PSPC1-202ENST00000427943 TMA7Q9Y2S6 64 aaKnown RBP10.04□□□□□ -0.8
PSPC1-202ENST00000427943 LOC105371267A0A1B0GV96 52 aa10.03□□□□□ -0.8
PSPC1-202ENST00000427943 VAMP3Q15836 100 aa10.02□□□□□ -0.81
PSPC1-202ENST00000427943 LINC00575Q6W349 94 aa10.02□□□□□ -0.81
PSPC1-202ENST00000427943 C12orf57Q99622 126 aa10.02□□□□□ -0.81
PSPC1-202ENST00000427943 SCGB1D1O95968 90 aa10.01□□□□□ -0.81
PSPC1-202ENST00000427943 C1orf195Q5TG92 126 aa10.01□□□□□ -0.81
PSPC1-202ENST00000427943 Q5XG85 94 aa10.01□□□□□ -0.81
PSPC1-202ENST00000427943 F8WEM9 126 aa10□□□□□ -0.81
PSPC1-202ENST00000427943 PCOTHQ58A44 107 aa10□□□□□ -0.81
PSPC1-202ENST00000427943 Q6ZQY7 126 aa10□□□□□ -0.81
PSPC1-202ENST00000427943 hADV29S1A0JD25 119 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms