RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 CRYGAP11844 174 aa11.24□□□□□ -0.61
COL9A2-204ENST00000427563 S100A12P80511 92 aa11.24□□□□□ -0.61
COL9A2-204ENST00000427563 SLC25A34Q6PIV7 304 aa11.24□□□□□ -0.61
COL9A2-204ENST00000427563 SPANXB1Q9NS25 103 aaPredicted RBP11.23□□□□□ -0.61
COL9A2-204ENST00000427563 Q6ZVH6 145 aa11.22□□□□□ -0.61
COL9A2-204ENST00000427563 TYMSOSQ8TAI1 123 aa11.22□□□□□ -0.61
COL9A2-204ENST00000427563 NDUFC2O95298 119 aa11.2□□□□□ -0.62
COL9A2-204ENST00000427563 IFITM1P13164 125 aa11.2□□□□□ -0.62
COL9A2-204ENST00000427563 SPRR1AP35321 89 aa11.2□□□□□ -0.62
COL9A2-204ENST00000427563 FAM229BQ4G0N7 80 aa11.2□□□□□ -0.62
COL9A2-204ENST00000427563 KRTAP4-16G5E9R7 235 aaPredicted RBP11.19□□□□□ -0.62
COL9A2-204ENST00000427563 TSPAN13O95857 204 aa11.19□□□□□ -0.62
COL9A2-204ENST00000427563 C2orf91Q6ZV80 131 aa11.19□□□□□ -0.62
COL9A2-204ENST00000427563 PPDPFQ9H3Y8 114 aa11.19□□□□□ -0.62
COL9A2-204ENST00000427563 KCNQ1DNQ9H478 68 aa11.19□□□□□ -0.62
COL9A2-204ENST00000427563 HIGD1BQ9P298 99 aa11.19□□□□□ -0.62
COL9A2-204ENST00000427563 TRBV10-3A0A0K0K1G6 114 aa11.18□□□□□ -0.62
COL9A2-204ENST00000427563 PRYO14603 147 aa11.18□□□□□ -0.62
COL9A2-204ENST00000427563 MUSTN1Q8IVN3 82 aa11.17□□□□□ -0.62
COL9A2-204ENST00000427563 COPS9Q8WXC6 57 aa11.17□□□□□ -0.62
COL9A2-204ENST00000427563 HIGD2AQ9BW72 106 aa11.17□□□□□ -0.62
COL9A2-204ENST00000427563 TRBV10-2A0A0K0K1G8 114 aa11.15□□□□□ -0.62
COL9A2-204ENST00000427563 LINC00337Q8N6G1 96 aa11.15□□□□□ -0.62
COL9A2-204ENST00000427563 PRR4Q16378 134 aa11.14□□□□□ -0.63
COL9A2-204ENST00000427563 C3orf22Q8N5N4 141 aa11.14□□□□□ -0.63
COL9A2-204ENST00000427563 UQCR10Q9UDW1 63 aa11.14□□□□□ -0.63
COL9A2-204ENST00000427563 SPRR4Q96PI1 79 aa11.13□□□□□ -0.63
COL9A2-204ENST00000427563 HIST1H4GQ99525 98 aa11.13□□□□□ -0.63
COL9A2-204ENST00000427563 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
COL9A2-204ENST00000427563 C12orf57Q99622 126 aa11.12□□□□□ -0.63
COL9A2-204ENST00000427563 PRO1933Q9H354 126 aa11.11□□□□□ -0.63
COL9A2-204ENST00000427563 LINC00304Q8N9R0 145 aa11.1□□□□□ -0.63
COL9A2-204ENST00000427563 DDTP30046 118 aa11.09□□□□□ -0.63
COL9A2-204ENST00000427563 LINC00518Q8N0U6 118 aa11.09□□□□□ -0.63
COL9A2-204ENST00000427563 ETDCA0A1B0GVM5 59 aa11.08□□□□□ -0.64
COL9A2-204ENST00000427563 B5MCH6 92 aa11.08□□□□□ -0.64
COL9A2-204ENST00000427563 IGLV6-57P01721 117 aa11.08□□□□□ -0.64
COL9A2-204ENST00000427563 TAL2Q16559 108 aa11.08□□□□□ -0.64
COL9A2-204ENST00000427563 A4D1N5 150 aa11.07□□□□□ -0.64
COL9A2-204ENST00000427563 ERC2-IT1O76042 136 aa11.07□□□□□ -0.64
COL9A2-204ENST00000427563 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
COL9A2-204ENST00000427563 CEND1Q8N111 149 aa11.05□□□□□ -0.64
COL9A2-204ENST00000427563 RETNLBQ9BQ08 111 aa11.05□□□□□ -0.64
COL9A2-204ENST00000427563 Q9BRP9 147 aa11.05□□□□□ -0.64
COL9A2-204ENST00000427563 HSD52Q0P140 79 aa11.04□□□□□ -0.64
COL9A2-204ENST00000427563 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
COL9A2-204ENST00000427563 LINC00483Q53H64 154 aa11.02□□□□□ -0.65
COL9A2-204ENST00000427563 ZNF706Q9Y5V0 76 aaPredicted RBP11.02□□□□□ -0.65
COL9A2-204ENST00000427563 TRAV23DV6A0A075B6W5 121 aa11.01□□□□□ -0.65
COL9A2-204ENST00000427563 TRAV13-2A0A0B4J235 113 aa11.01□□□□□ -0.65
COL9A2-204ENST00000427563 TSTD3H0UI37 97 aa11.01□□□□□ -0.65
COL9A2-204ENST00000427563 A6NDN8 102 aa11□□□□□ -0.65
COL9A2-204ENST00000427563 FXYD2P54710 66 aa11□□□□□ -0.65
COL9A2-204ENST00000427563 Q6ZRX8 168 aa11□□□□□ -0.65
COL9A2-204ENST00000427563 CBY1Q9Y3M2 126 aa10.99□□□□□ -0.65
COL9A2-204ENST00000427563 TMEM238LA0A1B0GVL6 79 aa10.97□□□□□ -0.65
COL9A2-204ENST00000427563 A6NJY4 79 aa10.97□□□□□ -0.65
COL9A2-204ENST00000427563 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
COL9A2-204ENST00000427563 CFC1P0CG37 223 aa10.97□□□□□ -0.65
COL9A2-204ENST00000427563 ZNF73O43830 326 aaPredicted RBP10.96□□□□□ -0.65
COL9A2-204ENST00000427563 CTAG1AP78358 180 aa10.96□□□□□ -0.65
COL9A2-204ENST00000427563 GAGE2AQ6NT46 116 aa10.96□□□□□ -0.65
COL9A2-204ENST00000427563 Q8NBF4 154 aa10.96□□□□□ -0.65
COL9A2-204ENST00000427563 A0A0B4J2C4 111 aa10.95□□□□□ -0.66
COL9A2-204ENST00000427563 MUC2Q02817 5179 aa10.94□□□□□ -0.66
COL9A2-204ENST00000427563 RAB37Q96AX2 223 aa10.93□□□□□ -0.66
COL9A2-204ENST00000427563 MUC17Q685J3 4493 aa10.92□□□□□ -0.66
COL9A2-204ENST00000427563 C6orf99Q4VX62 202 aa10.92□□□□□ -0.66
COL9A2-204ENST00000427563 BVES-AS1Q5T3Y7 98 aa10.92□□□□□ -0.66
COL9A2-204ENST00000427563 SPAG11AQ6PDA7 123 aa10.92□□□□□ -0.66
COL9A2-204ENST00000427563 SMIM11BQ8TCY0 68 aa10.92□□□□□ -0.66
COL9A2-204ENST00000427563 ST20-AS1Q8NBB2 130 aa10.91□□□□□ -0.66
COL9A2-204ENST00000427563 NHP2Q9NX24 153 aaKnown RBP10.91□□□□□ -0.66
COL9A2-204ENST00000427563 IGLV7-46A0A075B6I9 117 aa10.89□□□□□ -0.67
COL9A2-204ENST00000427563 IGLV9-49A0A0B4J1Y8 123 aa10.89□□□□□ -0.67
COL9A2-204ENST00000427563 A0A1B0GWB2 263 aa10.89□□□□□ -0.67
COL9A2-204ENST00000427563 HINT1P49773 126 aaPredicted RBP10.89□□□□□ -0.67
COL9A2-204ENST00000427563 MOBPQ13875 183 aa10.89□□□□□ -0.67
COL9A2-204ENST00000427563 M0R143 59 aa10.88□□□□□ -0.67
COL9A2-204ENST00000427563 PRO1854Q9UHT4 67 aa10.88□□□□□ -0.67
COL9A2-204ENST00000427563 TRBV7-6A0A0J9YX20 115 aa10.87□□□□□ -0.67
COL9A2-204ENST00000427563 K7ERJ3 54 aa10.87□□□□□ -0.67
COL9A2-204ENST00000427563 TPRXLQ17RH7 258 aa10.87□□□□□ -0.67
COL9A2-204ENST00000427563 H7C2G1 150 aa10.86□□□□□ -0.67
COL9A2-204ENST00000427563 COX7BP24311 80 aa10.86□□□□□ -0.67
COL9A2-204ENST00000427563 ELOF1P60002 83 aaKnown RBP10.86□□□□□ -0.67
COL9A2-204ENST00000427563 C4orf48Q5BLP8 95 aa10.84□□□□□ -0.67
COL9A2-204ENST00000427563 SSBP3-AS1Q7Z2R9 100 aa10.84□□□□□ -0.67
COL9A2-204ENST00000427563 SPINK1P00995 79 aa10.83□□□□□ -0.68
COL9A2-204ENST00000427563 Q1RN00 199 aa10.82□□□□□ -0.68
COL9A2-204ENST00000427563 SPRR1BP22528 89 aa10.8□□□□□ -0.68
COL9A2-204ENST00000427563 VAMP3Q15836 100 aa10.8□□□□□ -0.68
COL9A2-204ENST00000427563 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
COL9A2-204ENST00000427563 FP248Q71RG6 208 aaPredicted RBP10.79□□□□□ -0.68
COL9A2-204ENST00000427563 Q8N377 158 aa10.79□□□□□ -0.68
COL9A2-204ENST00000427563 CDIP1Q9H305 208 aa10.78□□□□□ -0.68
COL9A2-204ENST00000427563 RPS29P62273 56 aaKnown RBP10.77□□□□□ -0.69
COL9A2-204ENST00000427563 KRTAP13-3Q3SY46 172 aa10.77□□□□□ -0.69
COL9A2-204ENST00000427563 C9orf153Q5TBE3 101 aa10.77□□□□□ -0.69
COL9A2-204ENST00000427563 TRIAP1O43715 76 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms