RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 HIGD2AQ9BW72 106 aa15.03■□□□□ -0
HERPUD2-205ENST00000427455 JOSD1Q15040 202 aaPredicted RBP15.02■□□□□ -0
HERPUD2-205ENST00000427455 LINC00518Q8N0U6 118 aa15.02■□□□□ -0
HERPUD2-205ENST00000427455 CBY1Q9Y3M2 126 aa15.02■□□□□ -0
HERPUD2-205ENST00000427455 RPL13AP40429 203 aaKnown RBP15□□□□□ -0.01
HERPUD2-205ENST00000427455 MUSTN1Q8IVN3 82 aa14.99□□□□□ -0.01
HERPUD2-205ENST00000427455 OR13C6PQ8NH95 151 aa14.99□□□□□ -0.01
HERPUD2-205ENST00000427455 COX8AP10176 69 aa14.98□□□□□ -0.01
HERPUD2-205ENST00000427455 B5MCH6 92 aa14.97□□□□□ -0.01
HERPUD2-205ENST00000427455 ZNF73O43830 326 aaPredicted RBP14.97□□□□□ -0.01
HERPUD2-205ENST00000427455 VAMP8Q9BV40 100 aa14.97□□□□□ -0.01
HERPUD2-205ENST00000427455 PAM16Q9Y3D7 125 aa14.96□□□□□ -0.01
HERPUD2-205ENST00000427455 SPATA45Q537H7 98 aa14.95□□□□□ -0.02
HERPUD2-205ENST00000427455 DLEU1O43261 78 aa14.94□□□□□ -0.02
HERPUD2-205ENST00000427455 Q6ZRX8 168 aa14.94□□□□□ -0.02
HERPUD2-205ENST00000427455 A0A087X002 238 aa14.93□□□□□ -0.02
HERPUD2-205ENST00000427455 CRYGAP11844 174 aa14.93□□□□□ -0.02
HERPUD2-205ENST00000427455 FAM229BQ4G0N7 80 aa14.93□□□□□ -0.02
HERPUD2-205ENST00000427455 SMCR5Q8TEV8 140 aa14.93□□□□□ -0.02
HERPUD2-205ENST00000427455 ANAPC11Q9NYG5 84 aa14.92□□□□□ -0.02
HERPUD2-205ENST00000427455 ZNF706Q9Y5V0 76 aaPredicted RBP14.92□□□□□ -0.02
HERPUD2-205ENST00000427455 HMCN2Q8NDA2 5059 aa14.91□□□□□ -0.02
HERPUD2-205ENST00000427455 SPRR4Q96PI1 79 aa14.9□□□□□ -0.02
HERPUD2-205ENST00000427455 HINT1P49773 126 aaPredicted RBP14.89□□□□□ -0.03
HERPUD2-205ENST00000427455 PYY3Q5JQD4 70 aa14.89□□□□□ -0.03
HERPUD2-205ENST00000427455 C14orf144Q96I85 54 aa14.89□□□□□ -0.03
HERPUD2-205ENST00000427455 Q9BRP9 147 aa14.88□□□□□ -0.03
HERPUD2-205ENST00000427455 A6NDN8 102 aa14.86□□□□□ -0.03
HERPUD2-205ENST00000427455 TRAV13-2A0A0B4J235 113 aa14.85□□□□□ -0.03
HERPUD2-205ENST00000427455 SLC25A34Q6PIV7 304 aa14.85□□□□□ -0.03
HERPUD2-205ENST00000427455 HIST1H4GQ99525 98 aa14.85□□□□□ -0.03
HERPUD2-205ENST00000427455 TYMSOSQ8TAI1 123 aa14.84□□□□□ -0.03
HERPUD2-205ENST00000427455 ERC2-IT1O76042 136 aa14.83□□□□□ -0.04
HERPUD2-205ENST00000427455 KRTAP13-2Q52LG2 175 aa14.83□□□□□ -0.04
HERPUD2-205ENST00000427455 A4D1N5 150 aa14.82□□□□□ -0.04
HERPUD2-205ENST00000427455 C6orf99Q4VX62 202 aa14.82□□□□□ -0.04
HERPUD2-205ENST00000427455 HIGD1BQ9P298 99 aa14.82□□□□□ -0.04
HERPUD2-205ENST00000427455 ELOF1P60002 83 aaKnown RBP14.8□□□□□ -0.04
HERPUD2-205ENST00000427455 COX7BP24311 80 aa14.78□□□□□ -0.04
HERPUD2-205ENST00000427455 LINC00483Q53H64 154 aa14.78□□□□□ -0.04
HERPUD2-205ENST00000427455 C2orf91Q6ZV80 131 aa14.78□□□□□ -0.04
HERPUD2-205ENST00000427455 TRBV7-6A0A0J9YX20 115 aa14.77□□□□□ -0.05
HERPUD2-205ENST00000427455 DHRS4-AS1Q9P1J3 65 aa14.77□□□□□ -0.05
HERPUD2-205ENST00000427455 GAGE2AQ6NT46 116 aa14.75□□□□□ -0.05
HERPUD2-205ENST00000427455 C3orf22Q8N5N4 141 aa14.74□□□□□ -0.05
HERPUD2-205ENST00000427455 SMIM11BQ8TCY0 68 aa14.74□□□□□ -0.05
HERPUD2-205ENST00000427455 A0A1B0GWB2 263 aa14.73□□□□□ -0.05
HERPUD2-205ENST00000427455 C12orf57Q99622 126 aa14.72□□□□□ -0.05
HERPUD2-205ENST00000427455 TAL2Q16559 108 aa14.69□□□□□ -0.06
HERPUD2-205ENST00000427455 LINC00304Q8N9R0 145 aa14.69□□□□□ -0.06
HERPUD2-205ENST00000427455 ST20-AS1Q8NBB2 130 aa14.69□□□□□ -0.06
HERPUD2-205ENST00000427455 CEND1Q8N111 149 aa14.64□□□□□ -0.07
HERPUD2-205ENST00000427455 TSPAN13O95857 204 aa14.63□□□□□ -0.07
HERPUD2-205ENST00000427455 CFC1BP0CG36 223 aa14.63□□□□□ -0.07
HERPUD2-205ENST00000427455 CFC1P0CG37 223 aa14.63□□□□□ -0.07
HERPUD2-205ENST00000427455 VAMP3Q15836 100 aa14.62□□□□□ -0.07
HERPUD2-205ENST00000427455 IGLV9-49A0A0B4J1Y8 123 aa14.61□□□□□ -0.07
HERPUD2-205ENST00000427455 A0A0B4J2C4 111 aa14.61□□□□□ -0.07
HERPUD2-205ENST00000427455 SPRR1BP22528 89 aa14.61□□□□□ -0.07
HERPUD2-205ENST00000427455 RAB37Q96AX2 223 aa14.61□□□□□ -0.07
HERPUD2-205ENST00000427455 NHP2Q9NX24 153 aaKnown RBP14.61□□□□□ -0.07
HERPUD2-205ENST00000427455 UQCR10Q9UDW1 63 aa14.61□□□□□ -0.07
HERPUD2-205ENST00000427455 TMEM238LA0A1B0GVL6 79 aa14.6□□□□□ -0.07
HERPUD2-205ENST00000427455 A6NJY4 79 aa14.6□□□□□ -0.07
HERPUD2-205ENST00000427455 MOBPQ13875 183 aa14.59□□□□□ -0.07
HERPUD2-205ENST00000427455 Q8NBF4 154 aa14.59□□□□□ -0.07
HERPUD2-205ENST00000427455 CTAG1AP78358 180 aa14.58□□□□□ -0.08
HERPUD2-205ENST00000427455 HSD52Q0P140 79 aa14.58□□□□□ -0.08
HERPUD2-205ENST00000427455 SPAG11AQ6PDA7 123 aa14.57□□□□□ -0.08
HERPUD2-205ENST00000427455 SLC25A20O43772 301 aa14.56□□□□□ -0.08
HERPUD2-205ENST00000427455 FXYD2P54710 66 aa14.56□□□□□ -0.08
HERPUD2-205ENST00000427455 H7C2G1 150 aa14.55□□□□□ -0.08
HERPUD2-205ENST00000427455 BVES-AS1Q5T3Y7 98 aa14.55□□□□□ -0.08
HERPUD2-205ENST00000427455 SSBP3-AS1Q7Z2R9 100 aa14.55□□□□□ -0.08
HERPUD2-205ENST00000427455 C9orf153Q5TBE3 101 aa14.54□□□□□ -0.08
HERPUD2-205ENST00000427455 TEX49A0A1B0GTD5 131 aa14.53□□□□□ -0.08
HERPUD2-205ENST00000427455 SMIM6P0DI80 62 aa14.53□□□□□ -0.08
HERPUD2-205ENST00000427455 C4orf48Q5BLP8 95 aa14.53□□□□□ -0.08
HERPUD2-205ENST00000427455 LINC00575Q6W349 94 aa14.53□□□□□ -0.08
HERPUD2-205ENST00000427455 DEFB105AQ8NG35 78 aa14.53□□□□□ -0.08
HERPUD2-205ENST00000427455 IGLV5-48A0A075B6I7 105 aa14.52□□□□□ -0.09
HERPUD2-205ENST00000427455 LAMTOR3Q9UHA4 124 aa14.51□□□□□ -0.09
HERPUD2-205ENST00000427455 LRP2P98164 4655 aa14.5□□□□□ -0.09
HERPUD2-205ENST00000427455 LINC01547P58512 204 aaPredicted RBP14.49□□□□□ -0.09
HERPUD2-205ENST00000427455 PRO1854Q9UHT4 67 aa14.49□□□□□ -0.09
HERPUD2-205ENST00000427455 hADV29S1A0JD25 119 aa14.48□□□□□ -0.09
HERPUD2-205ENST00000427455 PRR4Q16378 134 aa14.47□□□□□ -0.09
HERPUD2-205ENST00000427455 Q1RN00 199 aa14.47□□□□□ -0.09
HERPUD2-205ENST00000427455 SPINK1P00995 79 aa14.46□□□□□ -0.09
HERPUD2-205ENST00000427455 UBR4Q5T4S7 5183 aa14.43□□□□□ -0.1
HERPUD2-205ENST00000427455 Q6ZQY7 126 aa14.43□□□□□ -0.1
HERPUD2-205ENST00000427455 PRO1933Q9H354 126 aa14.43□□□□□ -0.1
HERPUD2-205ENST00000427455 SMIM29Q86T20 159 aa14.42□□□□□ -0.1
HERPUD2-205ENST00000427455 Q8N377 158 aa14.42□□□□□ -0.1
HERPUD2-205ENST00000427455 H0YGX0 51 aa14.41□□□□□ -0.1
HERPUD2-205ENST00000427455 RETNLBQ9BQ08 111 aa14.41□□□□□ -0.1
HERPUD2-205ENST00000427455 RPS29P62273 56 aaKnown RBP14.4□□□□□ -0.1
HERPUD2-205ENST00000427455 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.4□□□□□ -0.1
HERPUD2-205ENST00000427455 LOC105371267A0A1B0GV96 52 aa14.39□□□□□ -0.11
HERPUD2-205ENST00000427455 K7ERJ3 54 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms