RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 PRR3P79522 188 aaKnown RBP9.65□□□□□ -0.87
COL11A1-204ENST00000427239 LINC00167Q96N53 147 aa9.63□□□□□ -0.87
COL11A1-204ENST00000427239 BIRC6Q9NR09 4857 aa9.62□□□□□ -0.87
COL11A1-204ENST00000427239 KIAA1109Q2LD37 5005 aa9.62□□□□□ -0.87
COL11A1-204ENST00000427239 NCR3O14931 201 aa9.62□□□□□ -0.87
COL11A1-204ENST00000427239 UBE2BP63146 152 aa9.62□□□□□ -0.87
COL11A1-204ENST00000427239 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
COL11A1-204ENST00000427239 RYR1P21817 5038 aa9.61□□□□□ -0.87
COL11A1-204ENST00000427239 IGLV1-50A0A075B6I6 118 aa9.6□□□□□ -0.87
COL11A1-204ENST00000427239 IGKV2-28A0A075B6P5 120 aa9.59□□□□□ -0.87
COL11A1-204ENST00000427239 A4D1N5 150 aa9.59□□□□□ -0.87
COL11A1-204ENST00000427239 RPL37AP8A6NKH3 93 aa9.59□□□□□ -0.87
COL11A1-204ENST00000427239 IGKV2D-28P01615 120 aa9.59□□□□□ -0.87
COL11A1-204ENST00000427239 PPDPFLQ8WWR9 84 aa9.59□□□□□ -0.87
COL11A1-204ENST00000427239 CDIP1Q9H305 208 aa9.59□□□□□ -0.87
COL11A1-204ENST00000427239 FAM229AH3BQW9 127 aa9.59□□□□□ -0.87
COL11A1-204ENST00000427239 S100A7L2Q5SY68 101 aa9.59□□□□□ -0.87
COL11A1-204ENST00000427239 LINC00528Q8N1L1 170 aa9.59□□□□□ -0.87
COL11A1-204ENST00000427239 HSPG2P98160 4391 aa9.59□□□□□ -0.87
COL11A1-204ENST00000427239 TRBV20-1A0A075B6N2 111 aa9.58□□□□□ -0.88
COL11A1-204ENST00000427239 TMEM126AQ9H061 195 aa9.58□□□□□ -0.88
COL11A1-204ENST00000427239 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
COL11A1-204ENST00000427239 TRAV13-2A0A0B4J235 113 aa9.56□□□□□ -0.88
COL11A1-204ENST00000427239 TSPAN13O95857 204 aa9.56□□□□□ -0.88
COL11A1-204ENST00000427239 IGLV6-57P01721 117 aa9.56□□□□□ -0.88
COL11A1-204ENST00000427239 SMCPP49901 116 aaPredicted RBP9.56□□□□□ -0.88
COL11A1-204ENST00000427239 OR13C6PQ8NH95 151 aa9.56□□□□□ -0.88
COL11A1-204ENST00000427239 TRBV10-3A0A0K0K1G6 114 aa9.56□□□□□ -0.88
COL11A1-204ENST00000427239 PSMB2P49721 201 aa9.56□□□□□ -0.88
COL11A1-204ENST00000427239 PSORS1C2Q9UIG4 136 aa9.56□□□□□ -0.88
COL11A1-204ENST00000427239 KRTAP11-1Q8IUC1 163 aa9.55□□□□□ -0.88
COL11A1-204ENST00000427239 Q8N1X5 172 aa9.55□□□□□ -0.88
COL11A1-204ENST00000427239 LINC00337Q8N6G1 96 aa9.55□□□□□ -0.88
COL11A1-204ENST00000427239 KCNQ1DNQ9H478 68 aa9.55□□□□□ -0.88
COL11A1-204ENST00000427239 SRRM2Q9UQ35 2752 aaKnown RBP9.54□□□□□ -0.88
COL11A1-204ENST00000427239 MT-ATP8P03928 68 aa9.53□□□□□ -0.88
COL11A1-204ENST00000427239 PLA2G1BP04054 148 aaKnown RBP9.53□□□□□ -0.88
COL11A1-204ENST00000427239 RPL37AP61513 92 aaKnown RBP9.53□□□□□ -0.88
COL11A1-204ENST00000427239 VPS13BQ7Z7G8 4022 aa9.53□□□□□ -0.88
COL11A1-204ENST00000427239 FAT1Q14517 4588 aa9.53□□□□□ -0.88
COL11A1-204ENST00000427239 PRYO14603 147 aa9.52□□□□□ -0.89
COL11A1-204ENST00000427239 CFC1BP0CG36 223 aa9.52□□□□□ -0.89
COL11A1-204ENST00000427239 CFC1P0CG37 223 aa9.52□□□□□ -0.89
COL11A1-204ENST00000427239 REG3GQ6UW15 175 aa9.52□□□□□ -0.89
COL11A1-204ENST00000427239 C1orf137Q5JT78 98 aa9.51□□□□□ -0.89
COL11A1-204ENST00000427239 A0A0B4J2C4 111 aa9.51□□□□□ -0.89
COL11A1-204ENST00000427239 Q5VSD8 79 aa9.51□□□□□ -0.89
COL11A1-204ENST00000427239 TRAV23DV6A0A075B6W5 121 aa9.5□□□□□ -0.89
COL11A1-204ENST00000427239 BCE1O60756 84 aa9.5□□□□□ -0.89
COL11A1-204ENST00000427239 TCL1BO95988 128 aa9.49□□□□□ -0.89
COL11A1-204ENST00000427239 ANAPC13Q9BS18 74 aa9.49□□□□□ -0.89
COL11A1-204ENST00000427239 SPRR1AP35321 89 aa9.48□□□□□ -0.89
COL11A1-204ENST00000427239 ZNF73O43830 326 aaPredicted RBP9.48□□□□□ -0.89
COL11A1-204ENST00000427239 ANKRD29Q8N6D5 301 aa9.48□□□□□ -0.89
COL11A1-204ENST00000427239 PRO1854Q9UHT4 67 aa9.48□□□□□ -0.89
COL11A1-204ENST00000427239 KRTAP10-4P60372 401 aaPredicted RBP9.47□□□□□ -0.89
COL11A1-204ENST00000427239 IGLV7-43P04211 117 aa9.46□□□□□ -0.89
COL11A1-204ENST00000427239 SCGB1C2P0DMR2 95 aa9.46□□□□□ -0.89
COL11A1-204ENST00000427239 ETDCA0A1B0GVM5 59 aa9.45□□□□□ -0.9
COL11A1-204ENST00000427239 KRTAP4-16G5E9R7 235 aaPredicted RBP9.45□□□□□ -0.9
COL11A1-204ENST00000427239 RPL13AP40429 203 aaKnown RBP9.45□□□□□ -0.9
COL11A1-204ENST00000427239 KRTAP17-1Q9BYP8 105 aa9.45□□□□□ -0.9
COL11A1-204ENST00000427239 H0Y9J4 135 aa9.45□□□□□ -0.9
COL11A1-204ENST00000427239 SLC25A20O43772 301 aa9.45□□□□□ -0.9
COL11A1-204ENST00000427239 FAM19A1Q7Z5A9 133 aa9.45□□□□□ -0.9
COL11A1-204ENST00000427239 ZNF861PO60384 105 aa9.44□□□□□ -0.9
COL11A1-204ENST00000427239 RPL28P46779 137 aaKnown RBP9.44□□□□□ -0.9
COL11A1-204ENST00000427239 Q6Q795 121 aa9.44□□□□□ -0.9
COL11A1-204ENST00000427239 SMIM11BQ8TCY0 68 aa9.44□□□□□ -0.9
COL11A1-204ENST00000427239 DIRC1Q969H9 104 aa9.44□□□□□ -0.9
COL11A1-204ENST00000427239 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
COL11A1-204ENST00000427239 UBE2AP49459 152 aa9.43□□□□□ -0.9
COL11A1-204ENST00000427239 LINC01600Q96MT4 127 aa9.43□□□□□ -0.9
COL11A1-204ENST00000427239 HERC2O95714 4834 aa9.43□□□□□ -0.9
COL11A1-204ENST00000427239 SNCGO76070 127 aa9.42□□□□□ -0.9
COL11A1-204ENST00000427239 C6orf99Q4VX62 202 aa9.42□□□□□ -0.9
COL11A1-204ENST00000427239 B5MCH6 92 aa9.42□□□□□ -0.9
COL11A1-204ENST00000427239 KRTAP13-1Q8IUC0 172 aa9.42□□□□□ -0.9
COL11A1-204ENST00000427239 ATXN8Q156A1 80 aa9.41□□□□□ -0.9
COL11A1-204ENST00000427239 SPINK6Q6UWN8 80 aa9.41□□□□□ -0.9
COL11A1-204ENST00000427239 C9JAW5 83 aa9.4□□□□□ -0.9
COL11A1-204ENST00000427239 H7C2G1 150 aa9.4□□□□□ -0.9
COL11A1-204ENST00000427239 Q6ZRX8 168 aa9.4□□□□□ -0.9
COL11A1-204ENST00000427239 PRLHP81277 87 aa9.39□□□□□ -0.91
COL11A1-204ENST00000427239 ELOF1P60002 83 aaKnown RBP9.39□□□□□ -0.91
COL11A1-204ENST00000427239 Q1RN00 199 aa9.39□□□□□ -0.91
COL11A1-204ENST00000427239 SS18L2Q9UHA2 77 aa9.39□□□□□ -0.91
COL11A1-204ENST00000427239 COX7BP24311 80 aa9.38□□□□□ -0.91
COL11A1-204ENST00000427239 NDUFV3P56181 108 aaKnown RBP9.37□□□□□ -0.91
COL11A1-204ENST00000427239 LCE2BO14633 110 aa9.36□□□□□ -0.91
COL11A1-204ENST00000427239 INAFM2P0DMQ5 153 aa9.36□□□□□ -0.91
COL11A1-204ENST00000427239 HIGD2AQ9BW72 106 aa9.36□□□□□ -0.91
COL11A1-204ENST00000427239 DHRS4-AS1Q9P1J3 65 aa9.36□□□□□ -0.91
COL11A1-204ENST00000427239 H0YGX0 51 aa9.34□□□□□ -0.91
COL11A1-204ENST00000427239 Q9BRP9 147 aa9.34□□□□□ -0.91
COL11A1-204ENST00000427239 KRTAP4-5Q9BYR2 181 aa9.34□□□□□ -0.91
COL11A1-204ENST00000427239 SMCR5Q8TEV8 140 aa9.34□□□□□ -0.92
COL11A1-204ENST00000427239 H3BT86 120 aa9.33□□□□□ -0.92
COL11A1-204ENST00000427239 COX6CP09669 75 aa9.33□□□□□ -0.92
COL11A1-204ENST00000427239 FAM240AA0A1B0GVK7 77 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms