RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 A8MWP4 228 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 ARID2Q68CP9 1835 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 LINC00313P59037 77 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 Q6ZSN1 163 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 LINC00476Q8WZB0 136 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 C7orf65Q6ZTY9 151 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 A0A1W2PNU3 283 aaPredicted RBP1.76□□□□□ -2.13
NEB-209ENST00000427231 CNBPP62633 177 aaKnown RBP1.76□□□□□ -2.13
NEB-209ENST00000427231 Q6ZQY7 126 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 CSAG1Q6PB30 78 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 LINC00167Q96N53 147 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 A8MU10 97 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 AFDNP55196 1824 aaKnown RBP1.76□□□□□ -2.13
NEB-209ENST00000427231 KIAA1671Q9BY89 1806 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 SPRR4Q96PI1 79 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 TENM4Q6N022 2769 aa1.76□□□□□ -2.13
NEB-209ENST00000427231 SEC61BP60468 96 aaKnown RBP1.75□□□□□ -2.13
NEB-209ENST00000427231 C9orf129Q5T035 196 aaKnown RBP1.75□□□□□ -2.13
NEB-209ENST00000427231 IGSF10Q6WRI0 2623 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 TSC2P49815 1807 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 BRCA1P38398 1863 aaKnown RBP1.75□□□□□ -2.13
NEB-209ENST00000427231 IGLV7-43P04211 117 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 ITPR3Q14573 2671 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 LINC00588Q9Y4M8 146 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 DCHS1Q96JQ0 3298 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 K7EQZ3 153 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 Q6ZTC4 211 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 LTBP1Q14766 1721 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 TMEM131Q92545 1883 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 LINC00612Q8N6U2 182 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 SBF1O95248 1867 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 TEP1Q99973 2627 aaKnown RBP1.75□□□□□ -2.13
NEB-209ENST00000427231 MIR22HGQ0VDD5 57 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 MGAQ8IWI9 3026 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 NOTCH2NLQ7Z3S9 236 aa1.75□□□□□ -2.13
NEB-209ENST00000427231 C8orf17Q9NRJ1 99 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 FRMPD3Q5JV73 1810 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 LINC00483Q53H64 154 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 GCN1Q92616 2671 aaKnown RBP1.74□□□□□ -2.13
NEB-209ENST00000427231 Q6ZRX8 168 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 F8W735 103 aaPredicted RBP1.74□□□□□ -2.13
NEB-209ENST00000427231 SPEGQ15772 3267 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 LINC00315P59091 139 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 KRTAP16-1A8MUX0 517 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 FLNCQ14315 2725 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 ZFHX4Q86UP3 3567 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 CELSR2Q9HCU4 2923 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 ZNF861PO60384 105 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 C9orf163Q8N9P6 203 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 XIRP1Q702N8 1843 aaKnown RBP1.74□□□□□ -2.13
NEB-209ENST00000427231 MUC3AQ02505 3323 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 ADM2Q7Z4H4 148 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 SMR3AQ99954 134 aa1.74□□□□□ -2.13
NEB-209ENST00000427231 COL18A1P39060 1754 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 C15orf56Q8N910 161 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 LAMA5O15230 3695 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 TACC2O95359 2948 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 KRTAP21-3Q3LHN1 58 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 A0A0G2JQZ4 141 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 A0A1W2PNN7 141 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 COL11A1P12107 1806 aaPredicted RBP1.73□□□□□ -2.13
NEB-209ENST00000427231 SMIM29Q86T20 159 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 TRPM7Q96QT4 1865 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 DNAH11Q96DT5 4516 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 BRWD3Q6RI45 1802 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 DEFB4AO15263 64 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 TNRC18O15417 2968 aaPredicted RBP1.73□□□□□ -2.13
NEB-209ENST00000427231 PLA2G1BP04054 148 aaKnown RBP1.73□□□□□ -2.13
NEB-209ENST00000427231 H0Y9P7 68 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 DMAC1Q96GE9 116 aa1.73□□□□□ -2.13
NEB-209ENST00000427231 C22orf24Q9Y442 160 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 ARFGEF1Q9Y6D6 1849 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 IGLV1-50A0A075B6I6 118 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 PARP14Q460N5 1801 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 ZNF236Q9UL36 1845 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 SMG1Q96Q15 3661 aaKnown RBP1.72□□□□□ -2.13
NEB-209ENST00000427231 RALGAPA2Q2PPJ7 1873 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 NBEAQ8NFP9 2946 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 X6R8D5 127 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 SPRR1BP22528 89 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 TENM3Q9P273 2699 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 PHF5AQ7RTV0 110 aaKnown RBP1.72□□□□□ -2.13
NEB-209ENST00000427231 ITGB4P16144 1822 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 ODF3L2Q3SX64 289 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 SPINK7P58062 85 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 NUP98P52948 1817 aa1.72□□□□□ -2.13
NEB-209ENST00000427231 UNQ6190/PRO20217Q6UXQ8 127 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 SPRR1AP35321 89 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 KRTAP10-9P60411 292 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 PSORS1C2Q9UIG4 136 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 ADAMTS9Q9P2N4 1935 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 LOC285556D6RIA3 1793 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 LOC400499M0QZD8 3231 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 C10orf99Q6UWK7 81 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 Q8NAQ8 132 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 CDC42SE1Q9NRR8 79 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 SLURP1P55000 103 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 TRRAPQ9Y4A5 3859 aa1.71□□□□□ -2.14
NEB-209ENST00000427231 NYNRINQ9P2P1 1898 aaKnown RBP1.71□□□□□ -2.14
NEB-209ENST00000427231 ST20-AS1Q8NBB2 130 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms