RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 CASC10Q5T4H9 136 aa5.21□□□□□ -1.57
CTNND1-207ENST00000426142 PRR34Q9NV39 138 aa5.21□□□□□ -1.57
CTNND1-207ENST00000426142 TRAV22A0A0B4J277 110 aa5.21□□□□□ -1.58
CTNND1-207ENST00000426142 A0A087WTM6 91 aa5.21□□□□□ -1.58
CTNND1-207ENST00000426142 KCNQ1DNQ9H478 68 aa5.21□□□□□ -1.58
CTNND1-207ENST00000426142 A0A1B0GW54 56 aa5.21□□□□□ -1.58
CTNND1-207ENST00000426142 TRBV7-4A0A0J9YYF1 115 aa5.21□□□□□ -1.58
CTNND1-207ENST00000426142 FLNBO75369 2602 aaKnown RBP5.2□□□□□ -1.58
CTNND1-207ENST00000426142 C9orf92A6NGG3 77 aa5.2□□□□□ -1.58
CTNND1-207ENST00000426142 DSCR10P59022 87 aa5.2□□□□□ -1.58
CTNND1-207ENST00000426142 IGFL1Q6UW32 110 aa5.19□□□□□ -1.58
CTNND1-207ENST00000426142 A8MWP4 228 aa5.19□□□□□ -1.58
CTNND1-207ENST00000426142 LINC00528Q8N1L1 170 aa5.19□□□□□ -1.58
CTNND1-207ENST00000426142 LINC00612Q8N6U2 182 aa5.18□□□□□ -1.58
CTNND1-207ENST00000426142 ZNF861PO60384 105 aa5.17□□□□□ -1.58
CTNND1-207ENST00000426142 APLNQ9ULZ1 77 aa5.17□□□□□ -1.58
CTNND1-207ENST00000426142 LINC00304Q8N9R0 145 aa5.17□□□□□ -1.58
CTNND1-207ENST00000426142 OBSCN-AS1Q96MR7 158 aa5.17□□□□□ -1.58
CTNND1-207ENST00000426142 MRPL34Q9BQ48 92 aaKnown RBP5.17□□□□□ -1.58
CTNND1-207ENST00000426142 BPTFQ12830 3046 aa5.16□□□□□ -1.58
CTNND1-207ENST00000426142 Q8N377 158 aa5.16□□□□□ -1.58
CTNND1-207ENST00000426142 C9orf163Q8N9P6 203 aa5.15□□□□□ -1.58
CTNND1-207ENST00000426142 LINC01554Q52M75 96 aa5.15□□□□□ -1.59
CTNND1-207ENST00000426142 C8orf87E5RJ46 101 aa5.15□□□□□ -1.59
CTNND1-207ENST00000426142 USP24Q9UPU5 2620 aa5.15□□□□□ -1.59
CTNND1-207ENST00000426142 H3BPC8 53 aa5.14□□□□□ -1.59
CTNND1-207ENST00000426142 HTTP42858 3142 aa5.14□□□□□ -1.59
CTNND1-207ENST00000426142 C4orf26Q17RF5 130 aa5.14□□□□□ -1.59
CTNND1-207ENST00000426142 MKI67P46013 3256 aaKnown RBP5.14□□□□□ -1.59
CTNND1-207ENST00000426142 PSORS1C2Q9UIG4 136 aa5.14□□□□□ -1.59
CTNND1-207ENST00000426142 RANBP2P49792 3224 aaKnown RBP5.14□□□□□ -1.59
CTNND1-207ENST00000426142 MGAM2Q2M2H8 2515 aa5.13□□□□□ -1.59
CTNND1-207ENST00000426142 LOC101927531A0A1B0GV80 90 aa5.13□□□□□ -1.59
CTNND1-207ENST00000426142 ERC2-IT1O76042 136 aa5.13□□□□□ -1.59
CTNND1-207ENST00000426142 IGLV7-43P04211 117 aa5.12□□□□□ -1.59
CTNND1-207ENST00000426142 C8orf17Q9NRJ1 99 aa5.12□□□□□ -1.59
CTNND1-207ENST00000426142 LAMA3Q16787 3333 aa5.12□□□□□ -1.59
CTNND1-207ENST00000426142 TLX1NBP0CAT3 122 aa5.12□□□□□ -1.59
CTNND1-207ENST00000426142 BRCA2P51587 3418 aa5.12□□□□□ -1.59
CTNND1-207ENST00000426142 IGLV5-37A0A075B6J1 123 aa5.11□□□□□ -1.59
CTNND1-207ENST00000426142 RBM12B-AS1Q9P1G2 102 aa5.11□□□□□ -1.59
CTNND1-207ENST00000426142 CHD9Q3L8U1 2897 aa5.11□□□□□ -1.59
CTNND1-207ENST00000426142 ZNF575Q86XF7 245 aa5.11□□□□□ -1.59
CTNND1-207ENST00000426142 LINC00336Q6ZUF6 198 aa5.11□□□□□ -1.59
CTNND1-207ENST00000426142 PRR15Q8IV56 129 aa5.1□□□□□ -1.59
CTNND1-207ENST00000426142 FLNAP21333 2647 aaKnown RBP5.1□□□□□ -1.59
CTNND1-207ENST00000426142 A0A1B0GVX0 72 aa5.1□□□□□ -1.59
CTNND1-207ENST00000426142 PLA2G2DQ9UNK4 145 aa5.1□□□□□ -1.59
CTNND1-207ENST00000426142 SSBP3-AS1Q7Z2R9 100 aa5.1□□□□□ -1.59
CTNND1-207ENST00000426142 COA5Q86WW8 74 aa5.09□□□□□ -1.59
CTNND1-207ENST00000426142 CNBPP62633 177 aaKnown RBP5.08□□□□□ -1.6
CTNND1-207ENST00000426142 ITPR3Q14573 2671 aa5.08□□□□□ -1.6
CTNND1-207ENST00000426142 TNP2Q05952 138 aa5.08□□□□□ -1.6
CTNND1-207ENST00000426142 SPRR4Q96PI1 79 aa5.08□□□□□ -1.6
CTNND1-207ENST00000426142 Q5VSD8 79 aa5.06□□□□□ -1.6
CTNND1-207ENST00000426142 LINC01600Q96MT4 127 aa5.06□□□□□ -1.6
CTNND1-207ENST00000426142 PRO0628Q9UI54 55 aa5.05□□□□□ -1.6
CTNND1-207ENST00000426142 A0A1W2PNM2 257 aa5.05□□□□□ -1.6
CTNND1-207ENST00000426142 CFAP54Q96N23 3096 aa5.04□□□□□ -1.6
CTNND1-207ENST00000426142 HELZ2Q9BYK8 2649 aaKnown RBP5.04□□□□□ -1.6
CTNND1-207ENST00000426142 A8MUN3 132 aa5.04□□□□□ -1.6
CTNND1-207ENST00000426142 Q6ZSA8 131 aa5.03□□□□□ -1.6
CTNND1-207ENST00000426142 RPS28P62857 69 aaKnown RBP5.03□□□□□ -1.6
CTNND1-207ENST00000426142 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.03□□□□□ -1.6
CTNND1-207ENST00000426142 CFAP46Q8IYW2 2715 aa5.03□□□□□ -1.6
CTNND1-207ENST00000426142 CR1P17927 2039 aa5.02□□□□□ -1.61
CTNND1-207ENST00000426142 PRUNE2Q8WUY3 3088 aa5.02□□□□□ -1.61
CTNND1-207ENST00000426142 ATRQ13535 2644 aa5.02□□□□□ -1.61
CTNND1-207ENST00000426142 Q8N1X5 172 aa5.01□□□□□ -1.61
CTNND1-207ENST00000426142 MGAQ8IWI9 3026 aa5.01□□□□□ -1.61
CTNND1-207ENST00000426142 CENPEQ02224 2701 aa5□□□□□ -1.61
CTNND1-207ENST00000426142 MAST4O15021 2626 aa5□□□□□ -1.61
CTNND1-207ENST00000426142 LAMA2P24043 3122 aaKnown RBP4.99□□□□□ -1.61
CTNND1-207ENST00000426142 PRR26Q8N8Z3 221 aa4.99□□□□□ -1.61
CTNND1-207ENST00000426142 FAM104AQ969W3 186 aa4.99□□□□□ -1.61
CTNND1-207ENST00000426142 IGLV5-48A0A075B6I7 105 aa4.98□□□□□ -1.61
CTNND1-207ENST00000426142 SPINT4Q6UDR6 99 aa4.98□□□□□ -1.61
CTNND1-207ENST00000426142 UNC80Q8N2C7 3258 aa4.98□□□□□ -1.61
CTNND1-207ENST00000426142 UQCR11O14957 56 aa4.98□□□□□ -1.61
CTNND1-207ENST00000426142 TRANK1O15050 2925 aa4.98□□□□□ -1.61
CTNND1-207ENST00000426142 XIRP2A4UGR9 3374 aa4.97□□□□□ -1.61
CTNND1-207ENST00000426142 KLKP1Q107X0 134 aa4.96□□□□□ -1.61
CTNND1-207ENST00000426142 MIR22HGQ0VDD5 57 aa4.96□□□□□ -1.62
CTNND1-207ENST00000426142 A0A0D9SG42 100 aa4.96□□□□□ -1.62
CTNND1-207ENST00000426142 WDFY4Q6ZS81 3184 aa4.95□□□□□ -1.62
CTNND1-207ENST00000426142 CDH23Q9H251 3354 aa4.95□□□□□ -1.62
CTNND1-207ENST00000426142 H7BZZ5 65 aa4.95□□□□□ -1.62
CTNND1-207ENST00000426142 IGLV7-46A0A075B6I9 117 aa4.94□□□□□ -1.62
CTNND1-207ENST00000426142 WIPF1O43516 503 aa4.94□□□□□ -1.62
CTNND1-207ENST00000426142 A0A0C4DFX4 3053 aa4.93□□□□□ -1.62
CTNND1-207ENST00000426142 CAMK2N1Q7Z7J9 78 aa4.93□□□□□ -1.62
CTNND1-207ENST00000426142 CYP4F30PQ9H0H9 118 aa4.93□□□□□ -1.62
CTNND1-207ENST00000426142 TRIOO75962 3097 aa4.93□□□□□ -1.62
CTNND1-207ENST00000426142 Q8NDZ9 215 aa4.92□□□□□ -1.62
CTNND1-207ENST00000426142 AKAP13Q12802 2813 aa4.91□□□□□ -1.62
CTNND1-207ENST00000426142 CRIPTQ9P021 101 aa4.9□□□□□ -1.62
CTNND1-207ENST00000426142 KRTAP1-5Q9BYS1 174 aa4.9□□□□□ -1.63
CTNND1-207ENST00000426142 PLAC8Q9NZF1 115 aa4.89□□□□□ -1.63
CTNND1-207ENST00000426142 CD164Q04900 197 aa4.89□□□□□ -1.63
CTNND1-207ENST00000426142 ZNF292O60281 2723 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms