RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 BAHCC1Q9P281 2608 aa1.46□□□□□ -2.18
SF3B1-205ENST00000424674 LINC00158P58513 81 aa1.46□□□□□ -2.18
SF3B1-205ENST00000424674 Q8IZM0 81 aa1.46□□□□□ -2.18
SF3B1-205ENST00000424674 TMEM167BQ9NRX6 74 aa1.46□□□□□ -2.18
SF3B1-205ENST00000424674 DEPDC5O75140 1603 aa1.46□□□□□ -2.18
SF3B1-205ENST00000424674 TNCP24821 2201 aa1.46□□□□□ -2.18
SF3B1-205ENST00000424674 CADP27708 2225 aa1.46□□□□□ -2.18
SF3B1-205ENST00000424674 COX6A2Q02221 97 aa1.45□□□□□ -2.18
SF3B1-205ENST00000424674 TNRC6CQ9HCJ0 1690 aaKnown RBP1.45□□□□□ -2.18
SF3B1-205ENST00000424674 LYNX1G3V0Z9 82 aa1.44□□□□□ -2.18
SF3B1-205ENST00000424674 PRO3102Q9H379 93 aa1.44□□□□□ -2.18
SF3B1-205ENST00000424674 TIMM8BQ9Y5J9 83 aaPredicted RBP1.44□□□□□ -2.18
SF3B1-205ENST00000424674 ATP7AQ04656 1500 aa1.44□□□□□ -2.18
SF3B1-205ENST00000424674 SPINK4O60575 86 aa1.43□□□□□ -2.18
SF3B1-205ENST00000424674 NDUFA3O95167 84 aa1.43□□□□□ -2.18
SF3B1-205ENST00000424674 KRTAP12-4P60329 112 aa1.43□□□□□ -2.18
SF3B1-205ENST00000424674 C10orf95Q9H7T3 257 aa1.43□□□□□ -2.18
SF3B1-205ENST00000424674 PRO0255Q9UI72 69 aa1.43□□□□□ -2.18
SF3B1-205ENST00000424674 KRTAP21-3Q3LHN1 58 aa1.42□□□□□ -2.18
SF3B1-205ENST00000424674 SAMD9LQ8IVG5 1584 aa1.42□□□□□ -2.18
SF3B1-205ENST00000424674 DDX60Q8IY21 1712 aaKnown RBP1.41□□□□□ -2.18
SF3B1-205ENST00000424674 TOGARAM1Q9Y4F4 1720 aa1.41□□□□□ -2.18
SF3B1-205ENST00000424674 ASXL3Q9C0F0 2248 aa1.4□□□□□ -2.18
SF3B1-205ENST00000424674 HIVEP2P31629 2446 aa1.4□□□□□ -2.18
SF3B1-205ENST00000424674 FLG2Q5D862 2391 aaPredicted RBP1.4□□□□□ -2.19
SF3B1-205ENST00000424674 SNRPGP62308 76 aaKnown RBP1.4□□□□□ -2.19
SF3B1-205ENST00000424674 Q6ZSA8 131 aa1.4□□□□□ -2.19
SF3B1-205ENST00000424674 LINC00308Q8TCZ7 52 aa1.4□□□□□ -2.19
SF3B1-205ENST00000424674 C4AP0C0L4 1744 aa1.4□□□□□ -2.19
SF3B1-205ENST00000424674 URB1O60287 2271 aaKnown RBP1.4□□□□□ -2.19
SF3B1-205ENST00000424674 Q5VSD8 79 aa1.39□□□□□ -2.19
SF3B1-205ENST00000424674 CDC42BPAQ5VT25 1732 aa1.38□□□□□ -2.19
SF3B1-205ENST00000424674 CNTRLQ7Z7A1 2325 aa1.38□□□□□ -2.19
SF3B1-205ENST00000424674 C4BP0C0L5 1744 aa1.37□□□□□ -2.19
SF3B1-205ENST00000424674 SPRR1AP35321 89 aa1.37□□□□□ -2.19
SF3B1-205ENST00000424674 MINOS1Q5TGZ0 78 aa1.37□□□□□ -2.19
SF3B1-205ENST00000424674 KNTC1P50748 2209 aa1.36□□□□□ -2.19
SF3B1-205ENST00000424674 A0A0D9SG42 100 aa1.35□□□□□ -2.19
SF3B1-205ENST00000424674 LOC730098B7Z3J9 87 aa1.35□□□□□ -2.19
SF3B1-205ENST00000424674 H0YAA0 97 aa1.35□□□□□ -2.19
SF3B1-205ENST00000424674 SMIM2Q9BVW6 85 aa1.35□□□□□ -2.19
SF3B1-205ENST00000424674 APLNQ9ULZ1 77 aa1.35□□□□□ -2.19
SF3B1-205ENST00000424674 FBN1P35555 2871 aaKnown RBP1.35□□□□□ -2.19
SF3B1-205ENST00000424674 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
SF3B1-205ENST00000424674 DEFB105AQ8NG35 78 aa1.34□□□□□ -2.19
SF3B1-205ENST00000424674 C6orf48Q9UBA6 75 aa1.34□□□□□ -2.19
SF3B1-205ENST00000424674 IQGAP1P46940 1657 aa1.34□□□□□ -2.19
SF3B1-205ENST00000424674 LMO7Q8WWI1 1683 aa1.34□□□□□ -2.19
SF3B1-205ENST00000424674 GOLGA4Q13439 2230 aaKnown RBP1.34□□□□□ -2.2
SF3B1-205ENST00000424674 H1FX-AS1Q4G0G2 97 aa1.33□□□□□ -2.2
SF3B1-205ENST00000424674 WFDC13Q8IUB5 93 aa1.33□□□□□ -2.2
SF3B1-205ENST00000424674 AHCTF1Q8WYP5 2266 aa1.33□□□□□ -2.2
SF3B1-205ENST00000424674 KIF21BO75037 1637 aa1.33□□□□□ -2.2
SF3B1-205ENST00000424674 SPRR1BP22528 89 aa1.32□□□□□ -2.2
SF3B1-205ENST00000424674 KRTAP12-3P60328 96 aa1.31□□□□□ -2.2
SF3B1-205ENST00000424674 LELP1Q5T871 98 aa1.31□□□□□ -2.2
SF3B1-205ENST00000424674 ANKRD17O75179 2603 aaKnown RBP1.3□□□□□ -2.2
SF3B1-205ENST00000424674 IAPPP10997 89 aa1.3□□□□□ -2.2
SF3B1-205ENST00000424674 NDUFA1O15239 70 aa1.29□□□□□ -2.2
SF3B1-205ENST00000424674 TFF3Q07654 80 aa1.29□□□□□ -2.2
SF3B1-205ENST00000424674 FAM208BQ5VWN6 2430 aa1.28□□□□□ -2.2
SF3B1-205ENST00000424674 RP1L1Q8IWN7 2480 aaPredicted RBP1.28□□□□□ -2.2
SF3B1-205ENST00000424674 BPTFQ12830 3046 aa1.28□□□□□ -2.2
SF3B1-205ENST00000424674 ZDBF2Q9HCK1 2354 aa1.28□□□□□ -2.2
SF3B1-205ENST00000424674 NAV3Q8IVL0 2385 aa1.27□□□□□ -2.21
SF3B1-205ENST00000424674 CACNA1EQ15878 2313 aa1.27□□□□□ -2.21
SF3B1-205ENST00000424674 DEFB130BP0DP73 79 aa1.27□□□□□ -2.21
SF3B1-205ENST00000424674 DEFB130AP0DP74 79 aa1.27□□□□□ -2.21
SF3B1-205ENST00000424674 PRB3Q04118 309 aaPredicted RBP1.27□□□□□ -2.21
SF3B1-205ENST00000424674 DUOX1Q9NRD9 1551 aa1.26□□□□□ -2.21
SF3B1-205ENST00000424674 RPS27P42677 84 aaKnown RBP1.26□□□□□ -2.21
SF3B1-205ENST00000424674 KRTAP10-4P60372 401 aaPredicted RBP1.26□□□□□ -2.21
SF3B1-205ENST00000424674 RPS27LQ71UM5 84 aaKnown RBP1.26□□□□□ -2.21
SF3B1-205ENST00000424674 OTOGLQ3ZCN5 2332 aa1.25□□□□□ -2.21
SF3B1-205ENST00000424674 SORL1Q92673 2214 aa1.24□□□□□ -2.21
SF3B1-205ENST00000424674 JMJD1CQ15652 2540 aa1.23□□□□□ -2.21
SF3B1-205ENST00000424674 MROH2BQ7Z745 1585 aa1.23□□□□□ -2.21
SF3B1-205ENST00000424674 H3BUA1 57 aa1.23□□□□□ -2.21
SF3B1-205ENST00000424674 WT1-ASQ06250 92 aa1.23□□□□□ -2.21
SF3B1-205ENST00000424674 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.23□□□□□ -2.219e-6■■□□□ 12.6
SF3B1-205ENST00000424674 KLK9Q2XQG4 91 aa1.22□□□□□ -2.21
SF3B1-205ENST00000424674 CNOT1A5YKK6 2376 aaKnown RBP1.21□□□□□ -2.22
SF3B1-205ENST00000424674 ASH1LQ9NR48 2969 aaKnown RBP1.2□□□□□ -2.22
SF3B1-205ENST00000424674 GCC2Q8IWJ2 1684 aa1.2□□□□□ -2.22
SF3B1-205ENST00000424674 WFDC10BQ8IUB3 73 aa1.19□□□□□ -2.22
SF3B1-205ENST00000424674 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
SF3B1-205ENST00000424674 COL6A6A6NMZ7 2263 aa1.19□□□□□ -2.22
SF3B1-205ENST00000424674 ALMS1Q8TCU4 4167 aa1.18□□□□□ -2.22
SF3B1-205ENST00000424674 DOPEY2Q9Y3R5 2298 aa1.18□□□□□ -2.22
SF3B1-205ENST00000424674 IGLV5-48A0A075B6I7 105 aa1.18□□□□□ -2.22
SF3B1-205ENST00000424674 PTPRQQ9UMZ3 2332 aa1.18□□□□□ -2.22
SF3B1-205ENST00000424674 UNC79Q9P2D8 2635 aa1.17□□□□□ -2.22
SF3B1-205ENST00000424674 DEFB131AP59861 70 aa1.17□□□□□ -2.22
SF3B1-205ENST00000424674 CLTCL1P53675 1640 aa1.17□□□□□ -2.22
SF3B1-205ENST00000424674 PTPRZ1P23471 2315 aaPredicted RBP1.16□□□□□ -2.22
SF3B1-205ENST00000424674 KAAG1Q9UBP8 84 aa1.16□□□□□ -2.22
SF3B1-205ENST00000424674 USF3Q68DE3 2245 aa1.16□□□□□ -2.22
SF3B1-205ENST00000424674 DEFB109BQ30KR1 87 aa1.15□□□□□ -2.23
SF3B1-205ENST00000424674 ROS1P08922 2347 aa1.15□□□□□ -2.23
SF3B1-205ENST00000424674 S4R3F8 94 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms