RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 LRP2P98164 4655 aa5.09□□□□□ -1.59
MDC1-204ENST00000422266 NCR3O14931 201 aa5.08□□□□□ -1.6
MDC1-204ENST00000422266 DLEU1O43261 78 aa5.08□□□□□ -1.6
MDC1-204ENST00000422266 TSPAN13O95857 204 aa5.08□□□□□ -1.6
MDC1-204ENST00000422266 SPRR1AP35321 89 aa5.08□□□□□ -1.6
MDC1-204ENST00000422266 SLC25A34Q6PIV7 304 aa5.08□□□□□ -1.6
MDC1-204ENST00000422266 C2orf91Q6ZV80 131 aa5.08□□□□□ -1.6
MDC1-204ENST00000422266 SPANXB1Q9NS25 103 aaPredicted RBP5.08□□□□□ -1.6
MDC1-204ENST00000422266 A0A0J9YXY3 114 aa5.07□□□□□ -1.6
MDC1-204ENST00000422266 DDTP30046 118 aa5.07□□□□□ -1.6
MDC1-204ENST00000422266 HINT1P49773 126 aaPredicted RBP5.07□□□□□ -1.6
MDC1-204ENST00000422266 C4orf48Q5BLP8 95 aa5.07□□□□□ -1.6
MDC1-204ENST00000422266 S100A7L2Q5SY68 101 aa5.07□□□□□ -1.6
MDC1-204ENST00000422266 Q8NDZ9 215 aa5.07□□□□□ -1.6
MDC1-204ENST00000422266 UQCR10Q9UDW1 63 aa5.07□□□□□ -1.6
MDC1-204ENST00000422266 TRBV10-3A0A0K0K1G6 114 aa5.06□□□□□ -1.6
MDC1-204ENST00000422266 TSTD3H0UI37 97 aa5.06□□□□□ -1.6
MDC1-204ENST00000422266 KRTAP13-2Q52LG2 175 aa5.06□□□□□ -1.6
MDC1-204ENST00000422266 SPRR4Q96PI1 79 aa5.06□□□□□ -1.6
MDC1-204ENST00000422266 LITAFQ99732 161 aa5.06□□□□□ -1.6
MDC1-204ENST00000422266 ANAPC11Q9NYG5 84 aa5.06□□□□□ -1.6
MDC1-204ENST00000422266 SCGB1D4Q6XE38 83 aa5.05□□□□□ -1.6
MDC1-204ENST00000422266 A0A0U1RQV1 116 aa5.04□□□□□ -1.6
MDC1-204ENST00000422266 KRTAP4-16G5E9R7 235 aaPredicted RBP5.04□□□□□ -1.6
MDC1-204ENST00000422266 TIMM17BO60830 172 aa5.04□□□□□ -1.6
MDC1-204ENST00000422266 ADAMTSL4-AS1Q5T5F5 129 aa5.04□□□□□ -1.6
MDC1-204ENST00000422266 DAND5Q8N907 189 aa5.04□□□□□ -1.6
MDC1-204ENST00000422266 COPS9Q8WXC6 57 aa5.04□□□□□ -1.6
MDC1-204ENST00000422266 B5MCH6 92 aa5.03□□□□□ -1.6
MDC1-204ENST00000422266 IGLV6-57P01721 117 aa5.03□□□□□ -1.6
MDC1-204ENST00000422266 Q6ZRX8 168 aa5.03□□□□□ -1.6
MDC1-204ENST00000422266 SMCR5Q8TEV8 140 aa5.03□□□□□ -1.6
MDC1-204ENST00000422266 HIGD1BQ9P298 99 aa5.03□□□□□ -1.6
MDC1-204ENST00000422266 TRAV23DV6A0A075B6W5 121 aa5.02□□□□□ -1.61
MDC1-204ENST00000422266 EIF4EBP3O60516 100 aaPredicted RBP5.02□□□□□ -1.61
MDC1-204ENST00000422266 SPINK1P00995 79 aa5.02□□□□□ -1.61
MDC1-204ENST00000422266 LINC00483Q53H64 154 aa5.02□□□□□ -1.61
MDC1-204ENST00000422266 SOSTDC1Q6X4U4 206 aa5.02□□□□□ -1.61
MDC1-204ENST00000422266 SPANXDQ9BXN6 97 aa5.02□□□□□ -1.61
MDC1-204ENST00000422266 SPANXCQ9NY87 97 aa5.02□□□□□ -1.61
MDC1-204ENST00000422266 PCP4L1A6NKN8 68 aa5.01□□□□□ -1.61
MDC1-204ENST00000422266 NPC2P61916 151 aa5.01□□□□□ -1.61
MDC1-204ENST00000422266 TPRXLQ17RH7 258 aa5.01□□□□□ -1.61
MDC1-204ENST00000422266 FP248Q71RG6 208 aaPredicted RBP5.01□□□□□ -1.61
MDC1-204ENST00000422266 SSBP3-AS1Q7Z2R9 100 aa5.01□□□□□ -1.61
MDC1-204ENST00000422266 C3orf22Q8N5N4 141 aa5.01□□□□□ -1.61
MDC1-204ENST00000422266 ZNF73O43830 326 aaPredicted RBP5□□□□□ -1.61
MDC1-204ENST00000422266 RPS29P62273 56 aaKnown RBP5□□□□□ -1.61
MDC1-204ENST00000422266 HSD52Q0P140 79 aa5□□□□□ -1.61
MDC1-204ENST00000422266 GAGE2AQ6NT46 116 aa5□□□□□ -1.61
MDC1-204ENST00000422266 CDIP1Q9H305 208 aa5□□□□□ -1.61
MDC1-204ENST00000422266 RNF213Q63HN8 5207 aa4.99□□□□□ -1.61
MDC1-204ENST00000422266 IGLV7-46A0A075B6I9 117 aa4.99□□□□□ -1.61
MDC1-204ENST00000422266 Q6ZVH6 145 aa4.99□□□□□ -1.61
MDC1-204ENST00000422266 OR13C6PQ8NH95 151 aa4.99□□□□□ -1.61
MDC1-204ENST00000422266 LINC00308Q8TCZ7 52 aa4.99□□□□□ -1.61
MDC1-204ENST00000422266 HIST1H4GQ99525 98 aa4.99□□□□□ -1.61
MDC1-204ENST00000422266 DHRS4-AS1Q9P1J3 65 aa4.99□□□□□ -1.61
MDC1-204ENST00000422266 FXYD2P54710 66 aa4.98□□□□□ -1.61
MDC1-204ENST00000422266 TAL2Q16559 108 aa4.98□□□□□ -1.61
MDC1-204ENST00000422266 MUSTN1Q8IVN3 82 aa4.98□□□□□ -1.61
MDC1-204ENST00000422266 CEND1Q8N111 149 aa4.98□□□□□ -1.61
MDC1-204ENST00000422266 Q8NBF4 154 aa4.98□□□□□ -1.61
MDC1-204ENST00000422266 PPDPFQ9H3Y8 114 aa4.98□□□□□ -1.61
MDC1-204ENST00000422266 IFITM1P13164 125 aa4.97□□□□□ -1.61
MDC1-204ENST00000422266 BVES-AS1Q5T3Y7 98 aa4.97□□□□□ -1.61
MDC1-204ENST00000422266 RETNLBQ9BQ08 111 aa4.97□□□□□ -1.61
MDC1-204ENST00000422266 Q9BRP9 147 aa4.97□□□□□ -1.61
MDC1-204ENST00000422266 LPAP08519 4548 aa4.96□□□□□ -1.61
MDC1-204ENST00000422266 IGLV9-49A0A0B4J1Y8 123 aa4.96□□□□□ -1.62
MDC1-204ENST00000422266 A4D1N5 150 aa4.96□□□□□ -1.62
MDC1-204ENST00000422266 MOBPQ13875 183 aa4.96□□□□□ -1.62
MDC1-204ENST00000422266 TRBV7-6A0A0J9YX20 115 aa4.95□□□□□ -1.62
MDC1-204ENST00000422266 SLC25A20O43772 301 aa4.95□□□□□ -1.62
MDC1-204ENST00000422266 ERC2-IT1O76042 136 aa4.95□□□□□ -1.62
MDC1-204ENST00000422266 C9orf153Q5TBE3 101 aa4.95□□□□□ -1.62
MDC1-204ENST00000422266 SNHG12Q9BXW3 62 aa4.95□□□□□ -1.62
MDC1-204ENST00000422266 K7ERJ3 54 aa4.94□□□□□ -1.62
MDC1-204ENST00000422266 M0R143 59 aa4.94□□□□□ -1.62
MDC1-204ENST00000422266 BATFQ16520 125 aa4.94□□□□□ -1.62
MDC1-204ENST00000422266 LAMTOR3Q9UHA4 124 aa4.94□□□□□ -1.62
MDC1-204ENST00000422266 COX7BP24311 80 aa4.93□□□□□ -1.62
MDC1-204ENST00000422266 ELOF1P60002 83 aaKnown RBP4.93□□□□□ -1.62
MDC1-204ENST00000422266 NHP2Q9NX24 153 aaKnown RBP4.93□□□□□ -1.62
MDC1-204ENST00000422266 TRAV13-2A0A0B4J235 113 aa4.92□□□□□ -1.62
MDC1-204ENST00000422266 A0A0B4J2C4 111 aa4.92□□□□□ -1.62
MDC1-204ENST00000422266 TMEM238LA0A1B0GVL6 79 aa4.92□□□□□ -1.62
MDC1-204ENST00000422266 A0A1B0GWB2 263 aa4.92□□□□□ -1.62
MDC1-204ENST00000422266 A6NJY4 79 aa4.92□□□□□ -1.62
MDC1-204ENST00000422266 CFC1BP0CG36 223 aa4.92□□□□□ -1.62
MDC1-204ENST00000422266 CFC1P0CG37 223 aa4.92□□□□□ -1.62
MDC1-204ENST00000422266 SPRR1BP22528 89 aa4.92□□□□□ -1.62
MDC1-204ENST00000422266 C6orf99Q4VX62 202 aa4.92□□□□□ -1.62
MDC1-204ENST00000422266 LIMD2Q9BT23 127 aa4.92□□□□□ -1.62
MDC1-204ENST00000422266 A6NDN8 102 aa4.91□□□□□ -1.62
MDC1-204ENST00000422266 TEX49A0A1B0GTD5 131 aa4.9□□□□□ -1.63
MDC1-204ENST00000422266 Q8N377 158 aa4.9□□□□□ -1.63
MDC1-204ENST00000422266 VAMP3Q15836 100 aa4.89□□□□□ -1.63
MDC1-204ENST00000422266 ST20-AS1Q8NBB2 130 aa4.89□□□□□ -1.63
MDC1-204ENST00000422266 RAB37Q96AX2 223 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms