RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 Q8N814 137 aa6.53□□□□□ -1.36
CMSS1-201ENST00000421999 SMCR5Q8TEV8 140 aa6.53□□□□□ -1.36
CMSS1-201ENST00000421999 TENM1Q9UKZ4 2725 aa6.53□□□□□ -1.36
CMSS1-201ENST00000421999 ZFHX3Q15911 3703 aa6.52□□□□□ -1.37
CMSS1-201ENST00000421999 APLNQ9ULZ1 77 aa6.51□□□□□ -1.37
CMSS1-201ENST00000421999 GVQW2A0A096LPI5 108 aaPredicted RBP6.51□□□□□ -1.37
CMSS1-201ENST00000421999 FAM236AA0A1B0GUQ0 79 aa6.51□□□□□ -1.37
CMSS1-201ENST00000421999 FAM236BA0A1B0GV22 79 aa6.51□□□□□ -1.37
CMSS1-201ENST00000421999 A0A087WYN8 130 aa6.51□□□□□ -1.37
CMSS1-201ENST00000421999 WFDC13Q8IUB5 93 aa6.5□□□□□ -1.37
CMSS1-201ENST00000421999 LINC00643Q86TS7 51 aa6.5□□□□□ -1.37
CMSS1-201ENST00000421999 SDIM1Q6ZPB5 146 aa6.49□□□□□ -1.37
CMSS1-201ENST00000421999 Q6ZRP5 223 aa6.49□□□□□ -1.37
CMSS1-201ENST00000421999 FAM19A3Q7Z5A8 133 aa6.49□□□□□ -1.37
CMSS1-201ENST00000421999 A0A087WTM6 91 aa6.49□□□□□ -1.37
CMSS1-201ENST00000421999 A0A087WSZ3 146 aa6.48□□□□□ -1.37
CMSS1-201ENST00000421999 SMR3BP02814 79 aaPredicted RBP6.48□□□□□ -1.37
CMSS1-201ENST00000421999 PRR34Q9NV39 138 aa6.48□□□□□ -1.37
CMSS1-201ENST00000421999 DMBT1Q9UGM3 2413 aaPredicted RBP6.47□□□□□ -1.37
CMSS1-201ENST00000421999 UQCRQO14949 82 aa6.47□□□□□ -1.37
CMSS1-201ENST00000421999 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.37
CMSS1-201ENST00000421999 Q6JHZ5 121 aa6.46□□□□□ -1.37
CMSS1-201ENST00000421999 Q6Q795 121 aa6.46□□□□□ -1.37
CMSS1-201ENST00000421999 LINC00575Q6W349 94 aa6.46□□□□□ -1.37
CMSS1-201ENST00000421999 LINC00476Q8WZB0 136 aa6.46□□□□□ -1.37
CMSS1-201ENST00000421999 SOSTDC1Q6X4U4 206 aa6.46□□□□□ -1.37
CMSS1-201ENST00000421999 CDIP1Q9H305 208 aa6.46□□□□□ -1.37
CMSS1-201ENST00000421999 CASC10Q5T4H9 136 aa6.45□□□□□ -1.38
CMSS1-201ENST00000421999 C3orf22Q8N5N4 141 aa6.45□□□□□ -1.38
CMSS1-201ENST00000421999 FAM168BA1KXE4 195 aa6.45□□□□□ -1.38
CMSS1-201ENST00000421999 MOBPQ13875 183 aa6.45□□□□□ -1.38
CMSS1-201ENST00000421999 ATOX1O00244 68 aa6.44□□□□□ -1.38
CMSS1-201ENST00000421999 CRYGAP11844 174 aa6.44□□□□□ -1.38
CMSS1-201ENST00000421999 SPACA4Q8TDM5 124 aa6.44□□□□□ -1.38
CMSS1-201ENST00000421999 PLA2G1BP04054 148 aaKnown RBP6.43□□□□□ -1.38
CMSS1-201ENST00000421999 J3QL48 77 aa6.43□□□□□ -1.38
CMSS1-201ENST00000421999 LINC00336Q6ZUF6 198 aa6.43□□□□□ -1.38
CMSS1-201ENST00000421999 VWFP04275 2813 aa6.43□□□□□ -1.38
CMSS1-201ENST00000421999 EPM2AB3EWF7 344 aa6.43□□□□□ -1.38
CMSS1-201ENST00000421999 DEFB116Q30KQ4 102 aa6.43□□□□□ -1.38
CMSS1-201ENST00000421999 C15orf56Q8N910 161 aa6.43□□□□□ -1.38
CMSS1-201ENST00000421999 RPL37AP61513 92 aaKnown RBP6.42□□□□□ -1.38
CMSS1-201ENST00000421999 C9orf163Q8N9P6 203 aa6.42□□□□□ -1.38
CMSS1-201ENST00000421999 IGHV6-1A0A0B4J1U7 121 aa6.42□□□□□ -1.38
CMSS1-201ENST00000421999 CASC2Q6XLA1 102 aa6.42□□□□□ -1.38
CMSS1-201ENST00000421999 FBN1P35555 2871 aaKnown RBP6.42□□□□□ -1.38
CMSS1-201ENST00000421999 KIAA0087Q14695 138 aa6.41□□□□□ -1.38
CMSS1-201ENST00000421999 V9GYY9 64 aa6.41□□□□□ -1.38
CMSS1-201ENST00000421999 TNP2Q05952 138 aa6.41□□□□□ -1.38
CMSS1-201ENST00000421999 TYMSOSQ8TAI1 123 aa6.41□□□□□ -1.38
CMSS1-201ENST00000421999 FAM104AQ969W3 186 aa6.41□□□□□ -1.38
CMSS1-201ENST00000421999 ATP5EP2Q5VTU8 51 aa6.4□□□□□ -1.38
CMSS1-201ENST00000421999 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
CMSS1-201ENST00000421999 SERTAD4-AS1Q5TG53 156 aa6.4□□□□□ -1.38
CMSS1-201ENST00000421999 LITAFQ99732 161 aa6.4□□□□□ -1.39
CMSS1-201ENST00000421999 LIMD2Q9BT23 127 aa6.4□□□□□ -1.39
CMSS1-201ENST00000421999 VPREB1P12018 145 aa6.39□□□□□ -1.39
CMSS1-201ENST00000421999 Q6ZRX8 168 aa6.39□□□□□ -1.39
CMSS1-201ENST00000421999 BCE1O60756 84 aa6.39□□□□□ -1.39
CMSS1-201ENST00000421999 IMUPQ9GZP8 106 aa6.38□□□□□ -1.39
CMSS1-201ENST00000421999 TMEM258P61165 79 aa6.38□□□□□ -1.39
CMSS1-201ENST00000421999 ST20-AS1Q8NBB2 130 aa6.37□□□□□ -1.39
CMSS1-201ENST00000421999 C20orf197Q8N268 126 aa6.37□□□□□ -1.39
CMSS1-201ENST00000421999 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
CMSS1-201ENST00000421999 CUBNO60494 3623 aa6.36□□□□□ -1.39
CMSS1-201ENST00000421999 COX7CP15954 63 aa6.36□□□□□ -1.39
CMSS1-201ENST00000421999 ELOF1P60002 83 aaKnown RBP6.36□□□□□ -1.39
CMSS1-201ENST00000421999 RETNLBQ9BQ08 111 aa6.36□□□□□ -1.39
CMSS1-201ENST00000421999 PRO0461Q9UI25 63 aa6.36□□□□□ -1.39
CMSS1-201ENST00000421999 ZNF469Q96JG9 3925 aaPredicted RBP6.35□□□□□ -1.39
CMSS1-201ENST00000421999 LINC01547P58512 204 aaPredicted RBP6.34□□□□□ -1.39
CMSS1-201ENST00000421999 AKAP9Q99996 3911 aa6.34□□□□□ -1.4
CMSS1-201ENST00000421999 BRK1Q8WUW1 75 aa6.33□□□□□ -1.4
CMSS1-201ENST00000421999 FAM218AQ96MZ4 157 aa6.33□□□□□ -1.4
CMSS1-201ENST00000421999 PRR4Q16378 134 aa6.32□□□□□ -1.4
CMSS1-201ENST00000421999 C9orf129Q5T035 196 aaKnown RBP6.32□□□□□ -1.4
CMSS1-201ENST00000421999 IGLV1-50A0A075B6I6 118 aa6.32□□□□□ -1.4
CMSS1-201ENST00000421999 SMCPP49901 116 aaPredicted RBP6.31□□□□□ -1.4
CMSS1-201ENST00000421999 TENM3Q9P273 2699 aa6.31□□□□□ -1.4
CMSS1-201ENST00000421999 TRBV7-6A0A0J9YX20 115 aa6.31□□□□□ -1.4
CMSS1-201ENST00000421999 FAM240AA0A1B0GVK7 77 aa6.31□□□□□ -1.4
CMSS1-201ENST00000421999 A0A1W2PNN7 141 aa6.31□□□□□ -1.4
CMSS1-201ENST00000421999 Q8NBF4 154 aa6.31□□□□□ -1.4
CMSS1-201ENST00000421999 ZNF861PO60384 105 aa6.3□□□□□ -1.4
CMSS1-201ENST00000421999 C1orf195Q5TG92 126 aa6.3□□□□□ -1.4
CMSS1-201ENST00000421999 IGLV6-57P01721 117 aa6.3□□□□□ -1.4
CMSS1-201ENST00000421999 CNBPP62633 177 aaKnown RBP6.3□□□□□ -1.4
CMSS1-201ENST00000421999 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
CMSS1-201ENST00000421999 A0A0U1RQV1 116 aa6.3□□□□□ -1.4
CMSS1-201ENST00000421999 Q6ZVQ6 151 aa6.29□□□□□ -1.4
CMSS1-201ENST00000421999 LINC00528Q8N1L1 170 aa6.29□□□□□ -1.4
CMSS1-201ENST00000421999 PSORS1C2Q9UIG4 136 aa6.29□□□□□ -1.4
CMSS1-201ENST00000421999 A0A087WVE0 104 aa6.29□□□□□ -1.4
CMSS1-201ENST00000421999 SEC61GP60059 68 aa6.29□□□□□ -1.4
CMSS1-201ENST00000421999 KCNQ1DNQ9H478 68 aa6.29□□□□□ -1.4
CMSS1-201ENST00000421999 FAM236DA0A1B0GTK5 79 aa6.28□□□□□ -1.4
CMSS1-201ENST00000421999 FAM236CP0DP71 79 aa6.28□□□□□ -1.4
CMSS1-201ENST00000421999 SERP2Q8N6R1 65 aa6.28□□□□□ -1.4
CMSS1-201ENST00000421999 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
CMSS1-201ENST00000421999 KRTAP1-5Q9BYS1 174 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms