RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 PLA2G1BP04054 148 aaKnown RBP9.66□□□□□ -0.86
DDX55-203ENST00000421670 RPL13AP40429 203 aaKnown RBP9.65□□□□□ -0.86
DDX55-203ENST00000421670 HINT1P49773 126 aaPredicted RBP9.65□□□□□ -0.86
DDX55-203ENST00000421670 NHP2Q9NX24 153 aaKnown RBP9.65□□□□□ -0.86
DDX55-203ENST00000421670 BCE1O60756 84 aa9.64□□□□□ -0.87
DDX55-203ENST00000421670 BVES-AS1Q5T3Y7 98 aa9.64□□□□□ -0.87
DDX55-203ENST00000421670 RAB37Q96AX2 223 aa9.64□□□□□ -0.87
DDX55-203ENST00000421670 A0A0B4J2C4 111 aa9.63□□□□□ -0.87
DDX55-203ENST00000421670 PKHD1L1Q86WI1 4243 aa9.63□□□□□ -0.87
DDX55-203ENST00000421670 K7ERJ3 54 aa9.63□□□□□ -0.87
DDX55-203ENST00000421670 SPRR1AP35321 89 aa9.63□□□□□ -0.87
DDX55-203ENST00000421670 ZNF73O43830 326 aaPredicted RBP9.62□□□□□ -0.87
DDX55-203ENST00000421670 IGLV7-43P04211 117 aa9.62□□□□□ -0.87
DDX55-203ENST00000421670 PRLHP81277 87 aa9.62□□□□□ -0.87
DDX55-203ENST00000421670 FAM19A1Q7Z5A9 133 aa9.62□□□□□ -0.87
DDX55-203ENST00000421670 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
DDX55-203ENST00000421670 KRTAP4-16G5E9R7 235 aaPredicted RBP9.61□□□□□ -0.87
DDX55-203ENST00000421670 H7C2G1 150 aa9.61□□□□□ -0.87
DDX55-203ENST00000421670 SMIM11BQ8TCY0 68 aa9.61□□□□□ -0.87
DDX55-203ENST00000421670 ETDCA0A1B0GVM5 59 aa9.6□□□□□ -0.87
DDX55-203ENST00000421670 M0R143 59 aa9.6□□□□□ -0.87
DDX55-203ENST00000421670 UBE2AP49459 152 aa9.59□□□□□ -0.87
DDX55-203ENST00000421670 C6orf99Q4VX62 202 aa9.59□□□□□ -0.87
DDX55-203ENST00000421670 DIRC1Q969H9 104 aa9.59□□□□□ -0.87
DDX55-203ENST00000421670 CBY1Q9Y3M2 126 aa9.59□□□□□ -0.87
DDX55-203ENST00000421670 KRTAP13-1Q8IUC0 172 aa9.58□□□□□ -0.88
DDX55-203ENST00000421670 PRO1854Q9UHT4 67 aa9.58□□□□□ -0.88
DDX55-203ENST00000421670 A0A1B0GWB2 263 aa9.58□□□□□ -0.88
DDX55-203ENST00000421670 BATFQ16520 125 aa9.58□□□□□ -0.88
DDX55-203ENST00000421670 PCP4L1A6NKN8 68 aa9.57□□□□□ -0.88
DDX55-203ENST00000421670 B5MCH6 92 aa9.57□□□□□ -0.88
DDX55-203ENST00000421670 ABCA13Q86UQ4 5058 aa9.57□□□□□ -0.88
DDX55-203ENST00000421670 ZNF861PO60384 105 aa9.56□□□□□ -0.88
DDX55-203ENST00000421670 RPL28P46779 137 aaKnown RBP9.56□□□□□ -0.88
DDX55-203ENST00000421670 Q1RN00 199 aa9.56□□□□□ -0.88
DDX55-203ENST00000421670 Q6ZRX8 168 aa9.56□□□□□ -0.88
DDX55-203ENST00000421670 HIGD2AQ9BW72 106 aa9.54□□□□□ -0.88
DDX55-203ENST00000421670 MYCBP2O75592 4640 aa9.54□□□□□ -0.88
DDX55-203ENST00000421670 Q9BRP9 147 aa9.54□□□□□ -0.88
DDX55-203ENST00000421670 H0Y9J4 135 aa9.53□□□□□ -0.88
DDX55-203ENST00000421670 COX7BP24311 80 aa9.53□□□□□ -0.88
DDX55-203ENST00000421670 ELOF1P60002 83 aaKnown RBP9.53□□□□□ -0.88
DDX55-203ENST00000421670 TSPAN13O95857 204 aa9.52□□□□□ -0.89
DDX55-203ENST00000421670 SPINK6Q6UWN8 80 aa9.52□□□□□ -0.89
DDX55-203ENST00000421670 SMCR5Q8TEV8 140 aa9.52□□□□□ -0.89
DDX55-203ENST00000421670 FLG2Q5D862 2391 aaPredicted RBP9.52□□□□□ -0.89
DDX55-203ENST00000421670 TRBV7-6A0A0J9YX20 115 aa9.5□□□□□ -0.89
DDX55-203ENST00000421670 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
DDX55-203ENST00000421670 LRP1Q07954 4544 aaKnown RBP9.5□□□□□ -0.89
DDX55-203ENST00000421670 TRIAP1O43715 76 aa9.49□□□□□ -0.89
DDX55-203ENST00000421670 ERC2-IT1O76042 136 aa9.49□□□□□ -0.89
DDX55-203ENST00000421670 SNHG12Q9BXW3 62 aa9.49□□□□□ -0.89
DDX55-203ENST00000421670 INAFM2P0DMQ5 153 aa9.48□□□□□ -0.89
DDX55-203ENST00000421670 VAMP3Q15836 100 aa9.48□□□□□ -0.89
DDX55-203ENST00000421670 FAT3Q8TDW7 4589 aa9.46□□□□□ -0.89
DDX55-203ENST00000421670 PSMB2P49721 201 aa9.46□□□□□ -0.89
DDX55-203ENST00000421670 NAA38Q9BRA0 125 aaKnown RBP9.46□□□□□ -0.9
DDX55-203ENST00000421670 DHRS4-AS1Q9P1J3 65 aa9.46□□□□□ -0.9
DDX55-203ENST00000421670 PCLOQ9Y6V0 5065 aa9.44□□□□□ -0.9
DDX55-203ENST00000421670 LINC00575Q6W349 94 aa9.43□□□□□ -0.9
DDX55-203ENST00000421670 ST20-AS1Q8NBB2 130 aa9.42□□□□□ -0.9
DDX55-203ENST00000421670 FAM218AQ96MZ4 157 aa9.42□□□□□ -0.9
DDX55-203ENST00000421670 KRTAP1-4P0C5Y4 121 aa9.41□□□□□ -0.9
DDX55-203ENST00000421670 CLEC2BQ92478 149 aa9.41□□□□□ -0.9
DDX55-203ENST00000421670 H0YGX0 51 aa9.41□□□□□ -0.9
DDX55-203ENST00000421670 SLC25A20O43772 301 aa9.41□□□□□ -0.9
DDX55-203ENST00000421670 SPRR4Q96PI1 79 aa9.41□□□□□ -0.9
DDX55-203ENST00000421670 ANAPC11Q9NYG5 84 aa9.41□□□□□ -0.9
DDX55-203ENST00000421670 TAX1BP3O14907 124 aa9.4□□□□□ -0.9
DDX55-203ENST00000421670 COX6CP09669 75 aa9.4□□□□□ -0.9
DDX55-203ENST00000421670 hADV29S1A0JD25 119 aa9.39□□□□□ -0.91
DDX55-203ENST00000421670 ZNF706Q9Y5V0 76 aaPredicted RBP9.39□□□□□ -0.91
DDX55-203ENST00000421670 GAGE2AQ6NT46 116 aa9.38□□□□□ -0.91
DDX55-203ENST00000421670 H3BUT2 72 aa9.37□□□□□ -0.91
DDX55-203ENST00000421670 SCGB1C2P0DMR2 95 aa9.37□□□□□ -0.91
DDX55-203ENST00000421670 COL5A1-AS1Q5SY13 56 aa9.37□□□□□ -0.91
DDX55-203ENST00000421670 Q6ZQY7 126 aa9.37□□□□□ -0.91
DDX55-203ENST00000421670 TNXBP22105 4242 aa9.36□□□□□ -0.91
DDX55-203ENST00000421670 DEFB105AQ8NG35 78 aa9.36□□□□□ -0.91
DDX55-203ENST00000421670 A0A087X002 238 aa9.35□□□□□ -0.91
DDX55-203ENST00000421670 C9orf118A6NHY6 69 aa9.35□□□□□ -0.91
DDX55-203ENST00000421670 LINC00483Q53H64 154 aa9.34□□□□□ -0.91
DDX55-203ENST00000421670 LINC01547P58512 204 aaPredicted RBP9.33□□□□□ -0.92
DDX55-203ENST00000421670 PRR26Q8N8Z3 221 aa9.33□□□□□ -0.92
DDX55-203ENST00000421670 LINC01600Q96MT4 127 aa9.33□□□□□ -0.92
DDX55-203ENST00000421670 IGLV5-48A0A075B6I7 105 aa9.32□□□□□ -0.92
DDX55-203ENST00000421670 A0A1B0GX51 115 aa9.32□□□□□ -0.92
DDX55-203ENST00000421670 LST1O00453 97 aa9.32□□□□□ -0.92
DDX55-203ENST00000421670 SNCGO76070 127 aa9.32□□□□□ -0.92
DDX55-203ENST00000421670 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.32□□□□□ -0.92
DDX55-203ENST00000421670 TCL1BO95988 128 aa9.31□□□□□ -0.92
DDX55-203ENST00000421670 FAM229BQ4G0N7 80 aa9.31□□□□□ -0.92
DDX55-203ENST00000421670 TEX49A0A1B0GTD5 131 aa9.3□□□□□ -0.92
DDX55-203ENST00000421670 A0A1W2PPM0 123 aa9.3□□□□□ -0.92
DDX55-203ENST00000421670 J3QL48 77 aa9.3□□□□□ -0.92
DDX55-203ENST00000421670 CRYGAP11844 174 aa9.3□□□□□ -0.92
DDX55-203ENST00000421670 KRTAP13-2Q52LG2 175 aa9.3□□□□□ -0.92
DDX55-203ENST00000421670 DNAL4O96015 105 aa9.29□□□□□ -0.92
DDX55-203ENST00000421670 OXTP01178 125 aa9.29□□□□□ -0.92
DDX55-203ENST00000421670 SPRR1BP22528 89 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms