RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 LINC01600Q96MT4 127 aa7.45□□□□□ -1.22
PTCH1-205ENST00000418258 IGLV1-50A0A075B6I6 118 aa7.45□□□□□ -1.22
PTCH1-205ENST00000418258 CSNK1G2-AS1Q8NCQ2 148 aa7.45□□□□□ -1.22
PTCH1-205ENST00000418258 RBM12B-AS1Q9P1G2 102 aa7.45□□□□□ -1.22
PTCH1-205ENST00000418258 FLNBO75369 2602 aaKnown RBP7.44□□□□□ -1.22
PTCH1-205ENST00000418258 A0A087WTM6 91 aa7.44□□□□□ -1.22
PTCH1-205ENST00000418258 IGLV5-37A0A075B6J1 123 aa7.43□□□□□ -1.22
PTCH1-205ENST00000418258 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
PTCH1-205ENST00000418258 KCNQ1DNQ9H478 68 aa7.41□□□□□ -1.22
PTCH1-205ENST00000418258 C4orf26Q17RF5 130 aa7.41□□□□□ -1.22
PTCH1-205ENST00000418258 IGFL1Q6UW32 110 aa7.41□□□□□ -1.22
PTCH1-205ENST00000418258 LINC00336Q6ZUF6 198 aa7.41□□□□□ -1.22
PTCH1-205ENST00000418258 ANAPC11Q9NYG5 84 aa7.4□□□□□ -1.22
PTCH1-205ENST00000418258 C15orf56Q8N910 161 aa7.4□□□□□ -1.23
PTCH1-205ENST00000418258 C19orf73Q9NVV2 129 aa7.4□□□□□ -1.23
PTCH1-205ENST00000418258 CRIPTQ9P021 101 aa7.4□□□□□ -1.23
PTCH1-205ENST00000418258 COA5Q86WW8 74 aa7.39□□□□□ -1.23
PTCH1-205ENST00000418258 LINC01554Q52M75 96 aa7.39□□□□□ -1.23
PTCH1-205ENST00000418258 PRO0628Q9UI54 55 aa7.39□□□□□ -1.23
PTCH1-205ENST00000418258 A0A1B0GVX0 72 aa7.37□□□□□ -1.23
PTCH1-205ENST00000418258 KRTAP10-3P60369 221 aa7.37□□□□□ -1.23
PTCH1-205ENST00000418258 UQCR11O14957 56 aa7.37□□□□□ -1.23
PTCH1-205ENST00000418258 C8orf17Q9NRJ1 99 aa7.37□□□□□ -1.23
PTCH1-205ENST00000418258 C9orf129Q5T035 196 aaKnown RBP7.36□□□□□ -1.23
PTCH1-205ENST00000418258 HECTD1Q9ULT8 2610 aa7.36□□□□□ -1.23
PTCH1-205ENST00000418258 IGLV7-43P04211 117 aa7.36□□□□□ -1.23
PTCH1-205ENST00000418258 PRR15Q8IV56 129 aa7.35□□□□□ -1.23
PTCH1-205ENST00000418258 MAST4O15021 2626 aa7.34□□□□□ -1.23
PTCH1-205ENST00000418258 PSORS1C2Q9UIG4 136 aa7.34□□□□□ -1.23
PTCH1-205ENST00000418258 LINC00528Q8N1L1 170 aa7.34□□□□□ -1.23
PTCH1-205ENST00000418258 FLNAP21333 2647 aaKnown RBP7.34□□□□□ -1.23
PTCH1-205ENST00000418258 AKAP13Q12802 2813 aa7.34□□□□□ -1.23
PTCH1-205ENST00000418258 ITPR3Q14573 2671 aa7.34□□□□□ -1.23
PTCH1-205ENST00000418258 CFAP46Q8IYW2 2715 aa7.34□□□□□ -1.24
PTCH1-205ENST00000418258 PRR34Q9NV39 138 aa7.34□□□□□ -1.24
PTCH1-205ENST00000418258 PRO0461Q9UI25 63 aa7.34□□□□□ -1.24
PTCH1-205ENST00000418258 A0A0G2JQZ4 141 aa7.33□□□□□ -1.24
PTCH1-205ENST00000418258 A0A1W2PNN7 141 aa7.33□□□□□ -1.24
PTCH1-205ENST00000418258 ATRQ13535 2644 aa7.33□□□□□ -1.24
PTCH1-205ENST00000418258 C9orf163Q8N9P6 203 aa7.33□□□□□ -1.24
PTCH1-205ENST00000418258 Q8N377 158 aa7.33□□□□□ -1.24
PTCH1-205ENST00000418258 LITAFQ99732 161 aa7.33□□□□□ -1.24
PTCH1-205ENST00000418258 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
PTCH1-205ENST00000418258 A0A0D9SG42 100 aa7.3□□□□□ -1.24
PTCH1-205ENST00000418258 RPS28P62857 69 aaKnown RBP7.3□□□□□ -1.24
PTCH1-205ENST00000418258 CFAP54Q96N23 3096 aa7.29□□□□□ -1.24
PTCH1-205ENST00000418258 HELZ2Q9BYK8 2649 aaKnown RBP7.29□□□□□ -1.24
PTCH1-205ENST00000418258 M0R2T5 61 aa7.29□□□□□ -1.24
PTCH1-205ENST00000418258 TLX1NBP0CAT3 122 aa7.29□□□□□ -1.24
PTCH1-205ENST00000418258 KLK9Q2XQG4 91 aa7.29□□□□□ -1.24
PTCH1-205ENST00000418258 PLA2G2DQ9UNK4 145 aa7.29□□□□□ -1.24
PTCH1-205ENST00000418258 GIG44P09565 113 aaPredicted RBP7.28□□□□□ -1.24
PTCH1-205ENST00000418258 ERC2-IT1O76042 136 aa7.27□□□□□ -1.25
PTCH1-205ENST00000418258 A8MUN3 132 aa7.27□□□□□ -1.25
PTCH1-205ENST00000418258 ZNF575Q86XF7 245 aa7.26□□□□□ -1.25
PTCH1-205ENST00000418258 A0A096LNT2 108 aa7.26□□□□□ -1.25
PTCH1-205ENST00000418258 Q6ZSA8 131 aa7.25□□□□□ -1.25
PTCH1-205ENST00000418258 Q8N1X5 172 aa7.25□□□□□ -1.25
PTCH1-205ENST00000418258 SPRR4Q96PI1 79 aa7.25□□□□□ -1.25
PTCH1-205ENST00000418258 CYP4F30PQ9H0H9 118 aa7.25□□□□□ -1.25
PTCH1-205ENST00000418258 CASC10Q5T4H9 136 aa7.24□□□□□ -1.25
PTCH1-205ENST00000418258 IGLV5-48A0A075B6I7 105 aa7.24□□□□□ -1.25
PTCH1-205ENST00000418258 CNBPP62633 177 aaKnown RBP7.23□□□□□ -1.25
PTCH1-205ENST00000418258 LAMA2P24043 3122 aaKnown RBP7.22□□□□□ -1.25
PTCH1-205ENST00000418258 EIF4EBP3O60516 100 aaPredicted RBP7.21□□□□□ -1.25
PTCH1-205ENST00000418258 XIRP2A4UGR9 3374 aa7.21□□□□□ -1.26
PTCH1-205ENST00000418258 TNP2Q05952 138 aa7.2□□□□□ -1.26
PTCH1-205ENST00000418258 LINC00612Q8N6U2 182 aa7.2□□□□□ -1.26
PTCH1-205ENST00000418258 MKI67P46013 3256 aaKnown RBP7.19□□□□□ -1.26
PTCH1-205ENST00000418258 CENPEQ02224 2701 aa7.19□□□□□ -1.26
PTCH1-205ENST00000418258 IGLV7-46A0A075B6I9 117 aa7.19□□□□□ -1.26
PTCH1-205ENST00000418258 FAM104AQ969W3 186 aa7.19□□□□□ -1.26
PTCH1-205ENST00000418258 CDC42SE1Q9NRR8 79 aa7.19□□□□□ -1.26
PTCH1-205ENST00000418258 KRTAP1-3Q8IUG1 177 aa7.17□□□□□ -1.26
PTCH1-205ENST00000418258 TEX15Q9BXT5 2789 aa7.16□□□□□ -1.26
PTCH1-205ENST00000418258 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
PTCH1-205ENST00000418258 CHD6Q8TD26 2715 aa7.14□□□□□ -1.27
PTCH1-205ENST00000418258 PRR26Q8N8Z3 221 aa7.13□□□□□ -1.27
PTCH1-205ENST00000418258 KLKP1Q107X0 134 aa7.12□□□□□ -1.27
PTCH1-205ENST00000418258 LUZP6Q538Z0 58 aa7.11□□□□□ -1.27
PTCH1-205ENST00000418258 KRTAP1-1Q07627 177 aa7.1□□□□□ -1.27
PTCH1-205ENST00000418258 STAB1Q9NY15 2570 aa7.1□□□□□ -1.27
PTCH1-205ENST00000418258 A0A0C4DFX4 3053 aa7.09□□□□□ -1.27
PTCH1-205ENST00000418258 A0A1W2PNM2 257 aa7.09□□□□□ -1.27
PTCH1-205ENST00000418258 CHD7Q9P2D1 2997 aa7.09□□□□□ -1.28
PTCH1-205ENST00000418258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.08□□□□□ -1.28
PTCH1-205ENST00000418258 CD164Q04900 197 aa7.07□□□□□ -1.28
PTCH1-205ENST00000418258 NBEAL1Q6ZS30 2694 aa7.07□□□□□ -1.28
PTCH1-205ENST00000418258 SPANXA2-OT1Q8N9U9 137 aa7.06□□□□□ -1.28
PTCH1-205ENST00000418258 LINC00483Q53H64 154 aa7.05□□□□□ -1.28
PTCH1-205ENST00000418258 PRUNE2Q8WUY3 3088 aa7.05□□□□□ -1.28
PTCH1-205ENST00000418258 H7BZZ5 65 aa7.05□□□□□ -1.28
PTCH1-205ENST00000418258 MGAQ8IWI9 3026 aa7.04□□□□□ -1.28
PTCH1-205ENST00000418258 LAMA3Q16787 3333 aa7.03□□□□□ -1.28
PTCH1-205ENST00000418258 CELSR3Q9NYQ7 3312 aa7.02□□□□□ -1.29
PTCH1-205ENST00000418258 S4R3F8 94 aa7.01□□□□□ -1.29
PTCH1-205ENST00000418258 TRIOO75962 3097 aa7.01□□□□□ -1.29
PTCH1-205ENST00000418258 BRCA2P51587 3418 aa7□□□□□ -1.29
PTCH1-205ENST00000418258 FAM229BQ4G0N7 80 aa7□□□□□ -1.29
PTCH1-205ENST00000418258 TEP1Q99973 2627 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms