RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 RPL28P46779 137 aaKnown RBP7.55□□□□□ -1.2
SKA1-203ENST00000417656 UBE2AP49459 152 aa7.55□□□□□ -1.2
SKA1-203ENST00000417656 PRLHP81277 87 aa7.55□□□□□ -1.2
SKA1-203ENST00000417656 TRBV10-2A0A0K0K1G8 114 aa7.54□□□□□ -1.2
SKA1-203ENST00000417656 PRYO14603 147 aa7.54□□□□□ -1.2
SKA1-203ENST00000417656 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
SKA1-203ENST00000417656 FAM19A1Q7Z5A9 133 aa7.54□□□□□ -1.2
SKA1-203ENST00000417656 KRTAP13-1Q8IUC0 172 aa7.54□□□□□ -1.2
SKA1-203ENST00000417656 SPANXDQ9BXN6 97 aa7.54□□□□□ -1.2
SKA1-203ENST00000417656 SPANXCQ9NY87 97 aa7.54□□□□□ -1.2
SKA1-203ENST00000417656 HERC1Q15751 4861 aa7.53□□□□□ -1.2
SKA1-203ENST00000417656 DDTP30046 118 aa7.53□□□□□ -1.2
SKA1-203ENST00000417656 LINC01600Q96MT4 127 aa7.53□□□□□ -1.2
SKA1-203ENST00000417656 KRTAP1-4P0C5Y4 121 aa7.51□□□□□ -1.21
SKA1-203ENST00000417656 JOSD1Q15040 202 aaPredicted RBP7.51□□□□□ -1.21
SKA1-203ENST00000417656 S100A7L2Q5SY68 101 aa7.51□□□□□ -1.21
SKA1-203ENST00000417656 KCNQ1DNQ9H478 68 aa7.51□□□□□ -1.21
SKA1-203ENST00000417656 SPRR1AP35321 89 aa7.5□□□□□ -1.21
SKA1-203ENST00000417656 PAM16Q9Y3D7 125 aa7.5□□□□□ -1.21
SKA1-203ENST00000417656 IGLV6-57P01721 117 aa7.49□□□□□ -1.21
SKA1-203ENST00000417656 CBY1Q9Y3M2 126 aa7.49□□□□□ -1.21
SKA1-203ENST00000417656 TRAV23DV6A0A075B6W5 121 aa7.48□□□□□ -1.21
SKA1-203ENST00000417656 ETDCA0A1B0GVM5 59 aa7.48□□□□□ -1.21
SKA1-203ENST00000417656 KRTAP4-16G5E9R7 235 aaPredicted RBP7.48□□□□□ -1.21
SKA1-203ENST00000417656 COX8AP10176 69 aa7.48□□□□□ -1.21
SKA1-203ENST00000417656 IFITM1P13164 125 aa7.48□□□□□ -1.21
SKA1-203ENST00000417656 SPATA45Q537H7 98 aa7.48□□□□□ -1.21
SKA1-203ENST00000417656 Q6ZVH6 145 aa7.48□□□□□ -1.21
SKA1-203ENST00000417656 LINC00337Q8N6G1 96 aa7.48□□□□□ -1.21
SKA1-203ENST00000417656 VAMP8Q9BV40 100 aa7.48□□□□□ -1.21
SKA1-203ENST00000417656 MUSTN1Q8IVN3 82 aa7.47□□□□□ -1.21
SKA1-203ENST00000417656 PRR26Q8N8Z3 221 aa7.47□□□□□ -1.21
SKA1-203ENST00000417656 OR13C6PQ8NH95 151 aa7.47□□□□□ -1.21
SKA1-203ENST00000417656 COPS9Q8WXC6 57 aa7.47□□□□□ -1.21
SKA1-203ENST00000417656 HIGD2AQ9BW72 106 aa7.47□□□□□ -1.21
SKA1-203ENST00000417656 PPDPFQ9H3Y8 114 aa7.47□□□□□ -1.21
SKA1-203ENST00000417656 TNXBP22105 4242 aa7.47□□□□□ -1.21
SKA1-203ENST00000417656 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
SKA1-203ENST00000417656 PYY3Q5JQD4 70 aa7.46□□□□□ -1.22
SKA1-203ENST00000417656 C14orf144Q96I85 54 aa7.45□□□□□ -1.22
SKA1-203ENST00000417656 B5MCH6 92 aa7.44□□□□□ -1.22
SKA1-203ENST00000417656 ZNF73O43830 326 aaPredicted RBP7.44□□□□□ -1.22
SKA1-203ENST00000417656 LINC00518Q8N0U6 118 aa7.44□□□□□ -1.22
SKA1-203ENST00000417656 DLEU1O43261 78 aa7.43□□□□□ -1.22
SKA1-203ENST00000417656 SMCR5Q8TEV8 140 aa7.43□□□□□ -1.22
SKA1-203ENST00000417656 ANAPC11Q9NYG5 84 aa7.43□□□□□ -1.22
SKA1-203ENST00000417656 A0A087X002 238 aa7.42□□□□□ -1.22
SKA1-203ENST00000417656 Q6ZRX8 168 aa7.42□□□□□ -1.22
SKA1-203ENST00000417656 SLC25A34Q6PIV7 304 aa7.41□□□□□ -1.22
SKA1-203ENST00000417656 HIST1H4GQ99525 98 aa7.41□□□□□ -1.22
SKA1-203ENST00000417656 Q9BRP9 147 aa7.41□□□□□ -1.22
SKA1-203ENST00000417656 KRTAP4-9Q9BYQ8 210 aa7.41□□□□□ -1.22
SKA1-203ENST00000417656 A4D1N5 150 aa7.4□□□□□ -1.22
SKA1-203ENST00000417656 A6NDN8 102 aa7.4□□□□□ -1.22
SKA1-203ENST00000417656 RPL13AP40429 203 aaKnown RBP7.4□□□□□ -1.22
SKA1-203ENST00000417656 C2orf91Q6ZV80 131 aa7.4□□□□□ -1.22
SKA1-203ENST00000417656 SPRR4Q96PI1 79 aa7.4□□□□□ -1.22
SKA1-203ENST00000417656 ERC2-IT1O76042 136 aa7.39□□□□□ -1.23
SKA1-203ENST00000417656 ZNF706Q9Y5V0 76 aaPredicted RBP7.39□□□□□ -1.23
SKA1-203ENST00000417656 CRYGAP11844 174 aa7.38□□□□□ -1.23
SKA1-203ENST00000417656 FAM229BQ4G0N7 80 aa7.38□□□□□ -1.23
SKA1-203ENST00000417656 C6orf99Q4VX62 202 aa7.38□□□□□ -1.23
SKA1-203ENST00000417656 C12orf57Q99622 126 aa7.38□□□□□ -1.23
SKA1-203ENST00000417656 HIGD1BQ9P298 99 aa7.38□□□□□ -1.23
SKA1-203ENST00000417656 TRAV13-2A0A0B4J235 113 aa7.37□□□□□ -1.23
SKA1-203ENST00000417656 HINT1P49773 126 aaPredicted RBP7.37□□□□□ -1.23
SKA1-203ENST00000417656 KRTAP13-2Q52LG2 175 aa7.37□□□□□ -1.23
SKA1-203ENST00000417656 HMCN2Q8NDA2 5059 aa7.37□□□□□ -1.23
SKA1-203ENST00000417656 COX7BP24311 80 aa7.35□□□□□ -1.23
SKA1-203ENST00000417656 ELOF1P60002 83 aaKnown RBP7.35□□□□□ -1.23
SKA1-203ENST00000417656 TYMSOSQ8TAI1 123 aa7.35□□□□□ -1.23
SKA1-203ENST00000417656 GAGE2AQ6NT46 116 aa7.34□□□□□ -1.23
SKA1-203ENST00000417656 SMIM11BQ8TCY0 68 aa7.34□□□□□ -1.23
SKA1-203ENST00000417656 PCP4L1A6NKN8 68 aa7.33□□□□□ -1.24
SKA1-203ENST00000417656 LINC00483Q53H64 154 aa7.33□□□□□ -1.24
SKA1-203ENST00000417656 C3orf22Q8N5N4 141 aa7.33□□□□□ -1.24
SKA1-203ENST00000417656 ST20-AS1Q8NBB2 130 aa7.33□□□□□ -1.24
SKA1-203ENST00000417656 A0A1B0GWB2 263 aa7.32□□□□□ -1.24
SKA1-203ENST00000417656 DHRS4-AS1Q9P1J3 65 aa7.32□□□□□ -1.24
SKA1-203ENST00000417656 TRBV7-6A0A0J9YX20 115 aa7.31□□□□□ -1.24
SKA1-203ENST00000417656 PCP4P48539 62 aa7.31□□□□□ -1.24
SKA1-203ENST00000417656 TAL2Q16559 108 aa7.31□□□□□ -1.24
SKA1-203ENST00000417656 CEND1Q8N111 149 aa7.31□□□□□ -1.24
SKA1-203ENST00000417656 UQCR10Q9UDW1 63 aa7.3□□□□□ -1.24
SKA1-203ENST00000417656 CFC1BP0CG36 223 aa7.29□□□□□ -1.24
SKA1-203ENST00000417656 CFC1P0CG37 223 aa7.29□□□□□ -1.24
SKA1-203ENST00000417656 FXYD2P54710 66 aa7.29□□□□□ -1.24
SKA1-203ENST00000417656 RAB37Q96AX2 223 aa7.29□□□□□ -1.24
SKA1-203ENST00000417656 A0A0B4J2C4 111 aa7.28□□□□□ -1.24
SKA1-203ENST00000417656 H7C2G1 150 aa7.28□□□□□ -1.24
SKA1-203ENST00000417656 SMIM6P0DI80 62 aa7.28□□□□□ -1.24
SKA1-203ENST00000417656 HSD52Q0P140 79 aa7.28□□□□□ -1.24
SKA1-203ENST00000417656 LINC00304Q8N9R0 145 aa7.28□□□□□ -1.24
SKA1-203ENST00000417656 KRTAP4-2Q9BYR5 136 aa7.28□□□□□ -1.24
SKA1-203ENST00000417656 IGLV9-49A0A0B4J1Y8 123 aa7.27□□□□□ -1.25
SKA1-203ENST00000417656 TSPAN13O95857 204 aa7.27□□□□□ -1.25
SKA1-203ENST00000417656 MOBPQ13875 183 aa7.26□□□□□ -1.25
SKA1-203ENST00000417656 PRO1933Q9H354 126 aa7.26□□□□□ -1.25
SKA1-203ENST00000417656 SPRR1BP22528 89 aa7.25□□□□□ -1.25
SKA1-203ENST00000417656 VAMP3Q15836 100 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms