RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 WNK1Q9H4A3 2382 aa4.17□□□□□ -1.74
CCNT1-202ENST00000417344 EP300Q09472 2414 aaPredicted RBP4.16□□□□□ -1.74
CCNT1-202ENST00000417344 A0A096LPF7 62 aa4.16□□□□□ -1.74
CCNT1-202ENST00000417344 Q8N1X5 172 aa4.16□□□□□ -1.74
CCNT1-202ENST00000417344 C4orf3Q8WVX3 66 aa4.16□□□□□ -1.74
CCNT1-202ENST00000417344 WFDC10AQ9H1F0 79 aa4.16□□□□□ -1.74
CCNT1-202ENST00000417344 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.16□□□□□ -1.743e-7■■■■■ 32.6
CCNT1-202ENST00000417344 DEFB130BP0DP73 79 aa4.16□□□□□ -1.74
CCNT1-202ENST00000417344 DEFB130AP0DP74 79 aa4.16□□□□□ -1.74
CCNT1-202ENST00000417344 Q8NBF4 154 aa4.16□□□□□ -1.74
CCNT1-202ENST00000417344 CREBBPQ92793 2442 aa4.15□□□□□ -1.74
CCNT1-202ENST00000417344 CR1P17927 2039 aa4.15□□□□□ -1.74
CCNT1-202ENST00000417344 C1orf137Q5JT78 98 aa4.15□□□□□ -1.75
CCNT1-202ENST00000417344 ABCA2Q9BZC7 2435 aa4.15□□□□□ -1.75
CCNT1-202ENST00000417344 SPTAN1Q13813 2472 aaKnown RBP4.15□□□□□ -1.75
CCNT1-202ENST00000417344 H3BPC8 53 aa4.14□□□□□ -1.75
CCNT1-202ENST00000417344 COA5Q86WW8 74 aa4.14□□□□□ -1.75
CCNT1-202ENST00000417344 SPRR4Q96PI1 79 aa4.14□□□□□ -1.75
CCNT1-202ENST00000417344 KRTAP9-3Q9BYQ3 159 aa4.14□□□□□ -1.75
CCNT1-202ENST00000417344 AKAP9Q99996 3911 aa4.14□□□□□ -1.75
CCNT1-202ENST00000417344 MUC6Q6W4X9 2439 aa4.14□□□□□ -1.75
CCNT1-202ENST00000417344 CUBNO60494 3623 aa4.14□□□□□ -1.75
CCNT1-202ENST00000417344 DEFB116Q30KQ4 102 aa4.14□□□□□ -1.75
CCNT1-202ENST00000417344 SPTA1P02549 2419 aa4.13□□□□□ -1.75
CCNT1-202ENST00000417344 H0Y9P7 68 aa4.13□□□□□ -1.75
CCNT1-202ENST00000417344 WFDC13Q8IUB5 93 aa4.13□□□□□ -1.75
CCNT1-202ENST00000417344 PRO0255Q9UI72 69 aa4.13□□□□□ -1.75
CCNT1-202ENST00000417344 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
CCNT1-202ENST00000417344 ANKRD11Q6UB99 2663 aaPredicted RBP4.13□□□□□ -1.75
CCNT1-202ENST00000417344 IGKV2D-24A0A075B6R9 120 aa4.12□□□□□ -1.75
CCNT1-202ENST00000417344 DNAJC9-AS1A6NH13 148 aa4.12□□□□□ -1.75
CCNT1-202ENST00000417344 B4DSR2 109 aa4.12□□□□□ -1.75
CCNT1-202ENST00000417344 FSHBP01225 129 aa4.12□□□□□ -1.75
CCNT1-202ENST00000417344 LINC00313P59037 77 aa4.12□□□□□ -1.75
CCNT1-202ENST00000417344 C9orf163Q8N9P6 203 aa4.12□□□□□ -1.75
CCNT1-202ENST00000417344 CRYBG3Q68DQ2 2970 aa4.12□□□□□ -1.75
CCNT1-202ENST00000417344 WFDC10BQ8IUB3 73 aa4.12□□□□□ -1.75
CCNT1-202ENST00000417344 PLAC8Q9NZF1 115 aa4.12□□□□□ -1.75
CCNT1-202ENST00000417344 MAP1AP78559 2803 aaPredicted RBP4.11□□□□□ -1.75
CCNT1-202ENST00000417344 CMC4P56277 68 aaPredicted RBP4.11□□□□□ -1.75
CCNT1-202ENST00000417344 LINC01554Q52M75 96 aa4.11□□□□□ -1.75
CCNT1-202ENST00000417344 CASC2Q6XLA1 102 aa4.11□□□□□ -1.75
CCNT1-202ENST00000417344 SPINK7P58062 85 aa4.11□□□□□ -1.75
CCNT1-202ENST00000417344 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
CCNT1-202ENST00000417344 ACACAQ13085 2346 aa4.1□□□□□ -1.75
CCNT1-202ENST00000417344 IGLV7-46A0A075B6I9 117 aa4.1□□□□□ -1.75
CCNT1-202ENST00000417344 SPAG11AQ6PDA7 123 aa4.1□□□□□ -1.75
CCNT1-202ENST00000417344 C7orf33Q8WU49 177 aa4.1□□□□□ -1.75
CCNT1-202ENST00000417344 DHRS4-AS1Q9P1J3 65 aa4.1□□□□□ -1.75
CCNT1-202ENST00000417344 BDP1A6H8Y1 2624 aa4.1□□□□□ -1.75
CCNT1-202ENST00000417344 KRTAP29-1A8MX34 341 aaPredicted RBP4.09□□□□□ -1.75
CCNT1-202ENST00000417344 EGFEM1PQ0D2K5 195 aa4.09□□□□□ -1.75
CCNT1-202ENST00000417344 CAMK2N2Q96S95 79 aa4.09□□□□□ -1.75
CCNT1-202ENST00000417344 CCL19Q99731 98 aa4.09□□□□□ -1.76
CCNT1-202ENST00000417344 PRR34Q9NV39 138 aa4.09□□□□□ -1.76
CCNT1-202ENST00000417344 NOTCH3Q9UM47 2321 aa4.08□□□□□ -1.76
CCNT1-202ENST00000417344 CNBPP62633 177 aaKnown RBP4.08□□□□□ -1.76
CCNT1-202ENST00000417344 PRR26Q8N8Z3 221 aa4.08□□□□□ -1.76
CCNT1-202ENST00000417344 Q6ZRX8 168 aa4.07□□□□□ -1.76
CCNT1-202ENST00000417344 CHD6Q8TD26 2715 aa4.07□□□□□ -1.76
CCNT1-202ENST00000417344 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
CCNT1-202ENST00000417344 GVINP1Q7Z2Y8 2422 aa4.06□□□□□ -1.76
CCNT1-202ENST00000417344 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
CCNT1-202ENST00000417344 Q8NAQ8 132 aa4.05□□□□□ -1.76
CCNT1-202ENST00000417344 RPL37AP61513 92 aaKnown RBP4.05□□□□□ -1.76
CCNT1-202ENST00000417344 LELP1Q5T871 98 aa4.05□□□□□ -1.76
CCNT1-202ENST00000417344 IGLV1-50A0A075B6I6 118 aa4.04□□□□□ -1.76
CCNT1-202ENST00000417344 KRTAP4-16G5E9R7 235 aaPredicted RBP4.04□□□□□ -1.76
CCNT1-202ENST00000417344 ASB16-AS1Q495Z4 193 aa4.04□□□□□ -1.76
CCNT1-202ENST00000417344 TLN1Q9Y490 2541 aaKnown RBP4.04□□□□□ -1.76
CCNT1-202ENST00000417344 IGLV5-37A0A075B6J1 123 aa4.04□□□□□ -1.76
CCNT1-202ENST00000417344 A0A087WSZ3 146 aa4.04□□□□□ -1.76
CCNT1-202ENST00000417344 IGLV1-51P01701 117 aa4.04□□□□□ -1.76
CCNT1-202ENST00000417344 SERTAD4-AS1Q5TG53 156 aa4.04□□□□□ -1.76
CCNT1-202ENST00000417344 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
CCNT1-202ENST00000417344 ITPR1Q14643 2758 aa4.04□□□□□ -1.76
CCNT1-202ENST00000417344 PCOTHQ58A44 107 aa4.03□□□□□ -1.76
CCNT1-202ENST00000417344 IGFL1Q6UW32 110 aa4.03□□□□□ -1.76
CCNT1-202ENST00000417344 OTOGLQ3ZCN5 2332 aa4.03□□□□□ -1.76
CCNT1-202ENST00000417344 A0A0G2JQZ4 141 aa4.02□□□□□ -1.77
CCNT1-202ENST00000417344 A0A1W2PNN7 141 aa4.02□□□□□ -1.77
CCNT1-202ENST00000417344 SPRR1AP35321 89 aa4.02□□□□□ -1.77
CCNT1-202ENST00000417344 RPL37AP8A6NKH3 93 aa4.02□□□□□ -1.77
CCNT1-202ENST00000417344 C15orf56Q8N910 161 aa4.02□□□□□ -1.77
CCNT1-202ENST00000417344 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
CCNT1-202ENST00000417344 CSPG4Q6UVK1 2322 aa4.01□□□□□ -1.77
CCNT1-202ENST00000417344 PKD1L2Q7Z442 2459 aa4.01□□□□□ -1.77
CCNT1-202ENST00000417344 A0A087X002 238 aa4□□□□□ -1.77
CCNT1-202ENST00000417344 A8MWP4 228 aa4□□□□□ -1.77
CCNT1-202ENST00000417344 HRES1P13985 223 aa4□□□□□ -1.77
CCNT1-202ENST00000417344 MAPK1IP1LQ8NDC0 245 aa4□□□□□ -1.77
CCNT1-202ENST00000417344 RTL8CO15255 209 aa4□□□□□ -1.77
CCNT1-202ENST00000417344 KRTAP26-1Q6PEX3 210 aa4□□□□□ -1.77
CCNT1-202ENST00000417344 SPTBN4Q9H254 2564 aa3.99□□□□□ -1.77
CCNT1-202ENST00000417344 DEFB4AO15263 64 aa3.99□□□□□ -1.77
CCNT1-202ENST00000417344 SPG11Q96JI7 2443 aa3.98□□□□□ -1.77
CCNT1-202ENST00000417344 RETNLBQ9BQ08 111 aa3.98□□□□□ -1.77
CCNT1-202ENST00000417344 NBASA2RRP1 2371 aa3.98□□□□□ -1.77
CCNT1-202ENST00000417344 IGLV8-61A0A075B6I0 122 aa3.97□□□□□ -1.77
CCNT1-202ENST00000417344 MMP24-AS1A0A0U1RRL7 71 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms