RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 FAM19A1Q7Z5A9 133 aa6.45□□□□□ -1.38
LINC00494-201ENST00000416742 TLX1NBP0CAT3 122 aa6.45□□□□□ -1.38
LINC00494-201ENST00000416742 MDFIQ99750 246 aa6.45□□□□□ -1.38
LINC00494-201ENST00000416742 KCNQ1DNQ9H478 68 aa6.45□□□□□ -1.38
LINC00494-201ENST00000416742 PSCAO43653 123 aa6.44□□□□□ -1.38
LINC00494-201ENST00000416742 ATOX1O00244 68 aa6.44□□□□□ -1.38
LINC00494-201ENST00000416742 PDE6GP18545 87 aa6.44□□□□□ -1.38
LINC00494-201ENST00000416742 UPK3BQ9BT76 320 aa6.44□□□□□ -1.38
LINC00494-201ENST00000416742 C9orf153Q5TBE3 101 aa6.43□□□□□ -1.38
LINC00494-201ENST00000416742 ETDCA0A1B0GVM5 59 aa6.43□□□□□ -1.38
LINC00494-201ENST00000416742 KRTAP1-5Q9BYS1 174 aa6.43□□□□□ -1.38
LINC00494-201ENST00000416742 LOC107984640A0A0U1RRK4 108 aa6.42□□□□□ -1.38
LINC00494-201ENST00000416742 Q6ZVQ6 151 aa6.42□□□□□ -1.38
LINC00494-201ENST00000416742 C3orf22Q8N5N4 141 aa6.42□□□□□ -1.38
LINC00494-201ENST00000416742 IGKV2-24A0A0C4DH68 120 aa6.42□□□□□ -1.38
LINC00494-201ENST00000416742 TRBV7-4A0A0J9YYF1 115 aa6.42□□□□□ -1.38
LINC00494-201ENST00000416742 ATP5EP2Q5VTU8 51 aa6.42□□□□□ -1.38
LINC00494-201ENST00000416742 IGLV1-50A0A075B6I6 118 aa6.41□□□□□ -1.38
LINC00494-201ENST00000416742 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.41□□□□□ -1.38
LINC00494-201ENST00000416742 UQCRQO14949 82 aa6.41□□□□□ -1.38
LINC00494-201ENST00000416742 SCXQ7RTU7 201 aa6.41□□□□□ -1.38
LINC00494-201ENST00000416742 KRTAP7-1Q8IUC3 87 aa6.41□□□□□ -1.38
LINC00494-201ENST00000416742 PLA2G2DQ9UNK4 145 aa6.41□□□□□ -1.38
LINC00494-201ENST00000416742 COX7CP15954 63 aa6.41□□□□□ -1.38
LINC00494-201ENST00000416742 MRPL55Q7Z7F7 128 aaKnown RBP6.4□□□□□ -1.38
LINC00494-201ENST00000416742 LINC01547P58512 204 aaPredicted RBP6.4□□□□□ -1.39
LINC00494-201ENST00000416742 UBE2BP63146 152 aa6.39□□□□□ -1.39
LINC00494-201ENST00000416742 COL7A1Q02388 2944 aa6.39□□□□□ -1.39
LINC00494-201ENST00000416742 PRYO14603 147 aa6.39□□□□□ -1.39
LINC00494-201ENST00000416742 Q6ZRX8 168 aa6.39□□□□□ -1.39
LINC00494-201ENST00000416742 Q8N377 158 aa6.39□□□□□ -1.39
LINC00494-201ENST00000416742 APLNQ9ULZ1 77 aa6.39□□□□□ -1.39
LINC00494-201ENST00000416742 TENM2Q9NT68 2774 aa6.39□□□□□ -1.39
LINC00494-201ENST00000416742 DNAH1Q9P2D7 4330 aa6.38□□□□□ -1.39
LINC00494-201ENST00000416742 DNAH9Q9NYC9 4486 aa6.38□□□□□ -1.39
LINC00494-201ENST00000416742 ST20-AS1Q8NBB2 130 aa6.38□□□□□ -1.39
LINC00494-201ENST00000416742 Q9BRP9 147 aa6.38□□□□□ -1.39
LINC00494-201ENST00000416742 DHRS4-AS1Q9P1J3 65 aa6.38□□□□□ -1.39
LINC00494-201ENST00000416742 IGLV5-37A0A075B6J1 123 aa6.38□□□□□ -1.39
LINC00494-201ENST00000416742 A0A096LNI7 61 aa6.37□□□□□ -1.39
LINC00494-201ENST00000416742 DNAH10Q8IVF4 4471 aa6.37□□□□□ -1.39
LINC00494-201ENST00000416742 C3orf84H3BNL1 204 aa6.37□□□□□ -1.39
LINC00494-201ENST00000416742 SERP2Q8N6R1 65 aa6.37□□□□□ -1.39
LINC00494-201ENST00000416742 B9D2Q9BPU9 175 aa6.37□□□□□ -1.39
LINC00494-201ENST00000416742 ERC2-IT1O76042 136 aa6.36□□□□□ -1.39
LINC00494-201ENST00000416742 KRTAP4-16G5E9R7 235 aaPredicted RBP6.36□□□□□ -1.39
LINC00494-201ENST00000416742 REG3GQ6UW15 175 aa6.36□□□□□ -1.39
LINC00494-201ENST00000416742 SPRR1AP35321 89 aa6.35□□□□□ -1.39
LINC00494-201ENST00000416742 A0A1W2PNN7 141 aa6.35□□□□□ -1.39
LINC00494-201ENST00000416742 NREPQ16612 68 aa6.34□□□□□ -1.39
LINC00494-201ENST00000416742 LYSTQ99698 3801 aa6.34□□□□□ -1.39
LINC00494-201ENST00000416742 CHTF8P0CG12 524 aa6.34□□□□□ -1.39
LINC00494-201ENST00000416742 C16orf90A8MZG2 172 aa6.33□□□□□ -1.4
LINC00494-201ENST00000416742 CXCL6P80162 114 aa6.33□□□□□ -1.4
LINC00494-201ENST00000416742 PRLHP81277 87 aa6.33□□□□□ -1.4
LINC00494-201ENST00000416742 Q8N9L7 120 aa6.32□□□□□ -1.4
LINC00494-201ENST00000416742 CNBPP62633 177 aaKnown RBP6.32□□□□□ -1.4
LINC00494-201ENST00000416742 C1orf137Q5JT78 98 aa6.32□□□□□ -1.4
LINC00494-201ENST00000416742 CRYGAP11844 174 aa6.32□□□□□ -1.4
LINC00494-201ENST00000416742 HIGD2AQ9BW72 106 aa6.32□□□□□ -1.4
LINC00494-201ENST00000416742 CYSTM1Q9H1C7 97 aa6.32□□□□□ -1.4
LINC00494-201ENST00000416742 C14orf177Q52M58 125 aa6.31□□□□□ -1.4
LINC00494-201ENST00000416742 DPH3Q96FX2 82 aa6.31□□□□□ -1.4
LINC00494-201ENST00000416742 IGLV5-48A0A075B6I7 105 aa6.31□□□□□ -1.4
LINC00494-201ENST00000416742 FUSP35637 526 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC00494-201ENST00000416742 SMIM20Q8N5G0 67 aa6.31□□□□□ -1.4
LINC00494-201ENST00000416742 PHF5AQ7RTV0 110 aaKnown RBP6.3□□□□□ -1.4
LINC00494-201ENST00000416742 NBDYA0A0U1RRE5 68 aa6.3□□□□□ -1.4
LINC00494-201ENST00000416742 A0A1W2PNM2 257 aa6.29□□□□□ -1.4
LINC00494-201ENST00000416742 NUPR2A6NF83 97 aa6.29□□□□□ -1.4
LINC00494-201ENST00000416742 A0A0G2JQZ4 141 aa6.29□□□□□ -1.4
LINC00494-201ENST00000416742 BPY2O14599 106 aa6.29□□□□□ -1.4
LINC00494-201ENST00000416742 C20orf197Q8N268 126 aa6.29□□□□□ -1.4
LINC00494-201ENST00000416742 PLECQ15149 4684 aaKnown RBP6.28□□□□□ -1.4
LINC00494-201ENST00000416742 F8WEM9 126 aa6.28□□□□□ -1.4
LINC00494-201ENST00000416742 CSMD3Q7Z407 3707 aa6.27□□□□□ -1.41
LINC00494-201ENST00000416742 TNP2Q05952 138 aa6.27□□□□□ -1.41
LINC00494-201ENST00000416742 C9orf163Q8N9P6 203 aa6.26□□□□□ -1.41
LINC00494-201ENST00000416742 LRCOL1A6NCL2 159 aa6.26□□□□□ -1.41
LINC00494-201ENST00000416742 KRTAP11-1Q8IUC1 163 aa6.26□□□□□ -1.41
LINC00494-201ENST00000416742 Q8NBF4 154 aa6.26□□□□□ -1.41
LINC00494-201ENST00000416742 TRAV7A0A075B6U4 112 aa6.26□□□□□ -1.41
LINC00494-201ENST00000416742 SMIM29Q86T20 159 aa6.25□□□□□ -1.41
LINC00494-201ENST00000416742 LINC00476Q8WZB0 136 aa6.25□□□□□ -1.41
LINC00494-201ENST00000416742 DNAH7Q8WXX0 4024 aa6.25□□□□□ -1.41
LINC00494-201ENST00000416742 IGKV4-1P06312 121 aa6.24□□□□□ -1.41
LINC00494-201ENST00000416742 DYNC2H1Q8NCM8 4307 aaKnown RBP6.24□□□□□ -1.41
LINC00494-201ENST00000416742 UBE2AP49459 152 aa6.24□□□□□ -1.41
LINC00494-201ENST00000416742 EPM2AB3EWF7 344 aa6.23□□□□□ -1.41
LINC00494-201ENST00000416742 PANO1I0J062 215 aa6.23□□□□□ -1.41
LINC00494-201ENST00000416742 SNURFQ9Y675 71 aa6.23□□□□□ -1.41
LINC00494-201ENST00000416742 BCE1O60756 84 aa6.22□□□□□ -1.41
LINC00494-201ENST00000416742 Q6ZRN7 208 aaPredicted RBP6.22□□□□□ -1.41
LINC00494-201ENST00000416742 IGFL1Q6UW32 110 aa6.22□□□□□ -1.41
LINC00494-201ENST00000416742 SRRM2Q9UQ35 2752 aaKnown RBP6.22□□□□□ -1.41
LINC00494-201ENST00000416742 TMEM258P61165 79 aa6.21□□□□□ -1.42
LINC00494-201ENST00000416742 SPRR4Q96PI1 79 aa6.21□□□□□ -1.42
LINC00494-201ENST00000416742 DEFB116Q30KQ4 102 aa6.2□□□□□ -1.42
LINC00494-201ENST00000416742 A0A1B0GW54 56 aa6.2□□□□□ -1.42
LINC00494-201ENST00000416742 LINC00474Q9P2X8 69 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms