RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 SSPOA2VEC9 5147 aa5.46□□□□□ -1.54
MDC1-202ENST00000416571 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
MDC1-202ENST00000416571 KRTAP10-6P60371 365 aaPredicted RBP5.45□□□□□ -1.54
MDC1-202ENST00000416571 IFI27L1Q96BM0 104 aa5.45□□□□□ -1.54
MDC1-202ENST00000416571 RPS10P5Q9NQ39 176 aa5.45□□□□□ -1.54
MDC1-202ENST00000416571 SPANXB1Q9NS25 103 aaPredicted RBP5.45□□□□□ -1.54
MDC1-202ENST00000416571 TRAV23DV6A0A075B6W5 121 aa5.44□□□□□ -1.54
MDC1-202ENST00000416571 H3BS24 57 aa5.44□□□□□ -1.54
MDC1-202ENST00000416571 HRCT1Q6UXD1 115 aa5.44□□□□□ -1.54
MDC1-202ENST00000416571 COMMD7Q86VX2 200 aa5.44□□□□□ -1.54
MDC1-202ENST00000416571 LOC107984156A0A0G2JMH3 177 aa5.43□□□□□ -1.54
MDC1-202ENST00000416571 IGLV6-57P01721 117 aa5.43□□□□□ -1.54
MDC1-202ENST00000416571 HINT1P49773 126 aaPredicted RBP5.43□□□□□ -1.54
MDC1-202ENST00000416571 RHEBQ15382 184 aa5.43□□□□□ -1.54
MDC1-202ENST00000416571 SLC25A34Q6PIV7 304 aa5.43□□□□□ -1.54
MDC1-202ENST00000416571 COX6B2Q6YFQ2 88 aa5.43□□□□□ -1.54
MDC1-202ENST00000416571 ARL17AQ8IVW1 177 aa5.43□□□□□ -1.54
MDC1-202ENST00000416571 ST20-AS1Q8NBB2 130 aa5.43□□□□□ -1.54
MDC1-202ENST00000416571 C5orf52A6NGY3 159 aa5.42□□□□□ -1.54
MDC1-202ENST00000416571 ZNF73O43830 326 aaPredicted RBP5.42□□□□□ -1.54
MDC1-202ENST00000416571 IFITM2Q01629 132 aa5.42□□□□□ -1.54
MDC1-202ENST00000416571 H0Y8G0 127 aa5.41□□□□□ -1.54
MDC1-202ENST00000416571 NDUFC2O95298 119 aa5.41□□□□□ -1.54
MDC1-202ENST00000416571 CHCHD1Q96BP2 118 aaKnown RBP5.41□□□□□ -1.54
MDC1-202ENST00000416571 CBY1Q9Y3M2 126 aa5.41□□□□□ -1.54
MDC1-202ENST00000416571 LOC105371267A0A1B0GV96 52 aa5.4□□□□□ -1.54
MDC1-202ENST00000416571 LEPROTO15243 131 aa5.4□□□□□ -1.54
MDC1-202ENST00000416571 LAMTOR3Q9UHA4 124 aa5.4□□□□□ -1.54
MDC1-202ENST00000416571 TSPEAR-AS2P59090 65 aa5.39□□□□□ -1.55
MDC1-202ENST00000416571 J3QQQ9 107 aa5.38□□□□□ -1.55
MDC1-202ENST00000416571 HSBP1O75506 76 aa5.38□□□□□ -1.55
MDC1-202ENST00000416571 LGALS3P17931 250 aaKnown RBP5.38□□□□□ -1.55
MDC1-202ENST00000416571 SPRR1BP22528 89 aa5.38□□□□□ -1.55
MDC1-202ENST00000416571 NMUP48645 174 aa5.38□□□□□ -1.55
MDC1-202ENST00000416571 HERVK_113P61574 105 aa5.38□□□□□ -1.55
MDC1-202ENST00000416571 NPC2P61916 151 aa5.38□□□□□ -1.55
MDC1-202ENST00000416571 DHRS4-AS1Q9P1J3 65 aa5.37□□□□□ -1.55
MDC1-202ENST00000416571 USH2AO75445 5202 aa5.37□□□□□ -1.55
MDC1-202ENST00000416571 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
MDC1-202ENST00000416571 H7C2G1 150 aa5.36□□□□□ -1.55
MDC1-202ENST00000416571 PLNP26678 52 aa5.36□□□□□ -1.55
MDC1-202ENST00000416571 CD164Q04900 197 aa5.36□□□□□ -1.55
MDC1-202ENST00000416571 NDUFA5Q16718 116 aa5.36□□□□□ -1.55
MDC1-202ENST00000416571 OR13C6PQ8NH95 151 aa5.36□□□□□ -1.55
MDC1-202ENST00000416571 PRO1933Q9H354 126 aa5.36□□□□□ -1.55
MDC1-202ENST00000416571 RPL37P61927 97 aaKnown RBP5.35□□□□□ -1.55
MDC1-202ENST00000416571 Q1RN00 199 aa5.35□□□□□ -1.55
MDC1-202ENST00000416571 C10orf91Q5T1B1 145 aa5.35□□□□□ -1.55
MDC1-202ENST00000416571 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
MDC1-202ENST00000416571 LEPROTL1O95214 131 aa5.34□□□□□ -1.55
MDC1-202ENST00000416571 TAL2Q16559 108 aa5.34□□□□□ -1.55
MDC1-202ENST00000416571 SOSTDC1Q6X4U4 206 aa5.34□□□□□ -1.55
MDC1-202ENST00000416571 DPM2O94777 84 aa5.33□□□□□ -1.56
MDC1-202ENST00000416571 DEFB105AQ8NG35 78 aa5.33□□□□□ -1.56
MDC1-202ENST00000416571 A0A0J9YXY3 114 aa5.32□□□□□ -1.56
MDC1-202ENST00000416571 IGKCP01834 107 aa5.32□□□□□ -1.56
MDC1-202ENST00000416571 COX7BP24311 80 aa5.32□□□□□ -1.56
MDC1-202ENST00000416571 AKR1D1P51857 326 aa5.32□□□□□ -1.56
MDC1-202ENST00000416571 ADAMTSL4-AS1Q5T5F5 129 aa5.32□□□□□ -1.56
MDC1-202ENST00000416571 SPANXCQ9NY87 97 aa5.32□□□□□ -1.56
MDC1-202ENST00000416571 SNAPINO95295 136 aa5.31□□□□□ -1.56
MDC1-202ENST00000416571 APOC3P02656 99 aa5.31□□□□□ -1.56
MDC1-202ENST00000416571 C1orf195Q5TG92 126 aa5.31□□□□□ -1.56
MDC1-202ENST00000416571 Q5XG85 94 aa5.31□□□□□ -1.56
MDC1-202ENST00000416571 PMCHL2Q9BQD1 86 aa5.31□□□□□ -1.56
MDC1-202ENST00000416571 TEX49A0A1B0GTD5 131 aa5.3□□□□□ -1.56
MDC1-202ENST00000416571 ELOF1P60002 83 aaKnown RBP5.3□□□□□ -1.56
MDC1-202ENST00000416571 Q6Q795 121 aa5.3□□□□□ -1.56
MDC1-202ENST00000416571 SPANXDQ9BXN6 97 aa5.3□□□□□ -1.56
MDC1-202ENST00000416571 HSPB8Q9UJY1 196 aa5.3□□□□□ -1.56
MDC1-202ENST00000416571 SMIM29Q86T20 159 aa5.29□□□□□ -1.56
MDC1-202ENST00000416571 SVBPQ8N300 66 aa5.29□□□□□ -1.56
MDC1-202ENST00000416571 LINC00308Q8TCZ7 52 aa5.29□□□□□ -1.56
MDC1-202ENST00000416571 TCL1BO95988 128 aa5.28□□□□□ -1.56
MDC1-202ENST00000416571 FABP4P15090 132 aa5.28□□□□□ -1.56
MDC1-202ENST00000416571 C6orf99Q4VX62 202 aa5.28□□□□□ -1.56
MDC1-202ENST00000416571 FLGP20930 4061 aaPredicted RBP5.28□□□□□ -1.56
MDC1-202ENST00000416571 E9PLD3 99 aa5.27□□□□□ -1.57
MDC1-202ENST00000416571 LINC00518Q8N0U6 118 aa5.27□□□□□ -1.57
MDC1-202ENST00000416571 SERF1AO75920 110 aa5.26□□□□□ -1.57
MDC1-202ENST00000416571 A0A0G2JQZ4 141 aa5.25□□□□□ -1.57
MDC1-202ENST00000416571 TIMM17BO60830 172 aa5.25□□□□□ -1.57
MDC1-202ENST00000416571 CFC1P0CG37 223 aa5.25□□□□□ -1.57
MDC1-202ENST00000416571 YPEL4Q96NS1 127 aa5.25□□□□□ -1.57
MDC1-202ENST00000416571 TRGC2P03986 189 aa5.24□□□□□ -1.57
MDC1-202ENST00000416571 ATP11AUNQ6ZP68 121 aa5.24□□□□□ -1.57
MDC1-202ENST00000416571 PCP2Q8IVA1 136 aa5.24□□□□□ -1.57
MDC1-202ENST00000416571 LITAFQ99732 161 aa5.24□□□□□ -1.57
MDC1-202ENST00000416571 IGLV5-48A0A075B6I7 105 aa5.23□□□□□ -1.57
MDC1-202ENST00000416571 TRBV7-6A0A0J9YX20 115 aa5.23□□□□□ -1.57
MDC1-202ENST00000416571 A0A1B0GWB2 263 aa5.23□□□□□ -1.57
MDC1-202ENST00000416571 PCP4L1A6NKN8 68 aa5.23□□□□□ -1.57
MDC1-202ENST00000416571 LINC00310P59036 64 aa5.23□□□□□ -1.57
MDC1-202ENST00000416571 NEBP20929 6669 aa5.22□□□□□ -1.57
MDC1-202ENST00000416571 ZNF815PA8K554 130 aa5.21□□□□□ -1.58
MDC1-202ENST00000416571 F8WEM9 126 aa5.21□□□□□ -1.58
MDC1-202ENST00000416571 NHP2Q9NX24 153 aaKnown RBP5.21□□□□□ -1.58
MDC1-202ENST00000416571 A6NDN8 102 aa5.2□□□□□ -1.58
MDC1-202ENST00000416571 PCP4P48539 62 aa5.2□□□□□ -1.58
MDC1-202ENST00000416571 KRTAP20-1Q3LI63 56 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms