RNA–Protein interactions for RNA: ENST00000416098.1

NXF4-202, Transcript of nuclear RNA export factor 4 pseudogene, humanhuman

BASIC

Gene NXF4, Length 1,465 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF4-202ENST00000416098 HIST3H2BBQ8N257 126 aa3.37□□□□□ -1.87
NXF4-202ENST00000416098 TMEM242Q9NWH2 141 aa3.37□□□□□ -1.87
NXF4-202ENST00000416098 RYR1P21817 5038 aa3.37□□□□□ -1.87
NXF4-202ENST00000416098 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.36□□□□□ -1.87
NXF4-202ENST00000416098 TRAV13-1A0A0B4J241 112 aa3.36□□□□□ -1.87
NXF4-202ENST00000416098 C20orf202A1L168 122 aa3.36□□□□□ -1.87
NXF4-202ENST00000416098 IGKV2-29A2NJV5 120 aaPredicted RBP3.36□□□□□ -1.87
NXF4-202ENST00000416098 D6R8Y8 96 aa3.36□□□□□ -1.87
NXF4-202ENST00000416098 WFDC2Q14508 124 aa3.36□□□□□ -1.87
NXF4-202ENST00000416098 CLPSL2Q6UWE3 100 aa3.36□□□□□ -1.87
NXF4-202ENST00000416098 PHF5AQ7RTV0 110 aaKnown RBP3.36□□□□□ -1.87
NXF4-202ENST00000416098 DEFB104AQ8WTQ1 72 aa3.36□□□□□ -1.87
NXF4-202ENST00000416098 SCGB3A1Q96QR1 104 aa3.36□□□□□ -1.87
NXF4-202ENST00000416098 HIST1H2BLQ99880 126 aa3.36□□□□□ -1.87
NXF4-202ENST00000416098 SMIM2Q9BVW6 85 aa3.36□□□□□ -1.87
NXF4-202ENST00000416098 HERC2O95714 4834 aa3.36□□□□□ -1.87
NXF4-202ENST00000416098 H3BMG7 143 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 CCL25O15444 150 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 KRTAP26-1Q6PEX3 210 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 TMEM136Q6ZRR5 245 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 PRELID3AQ96N28 172 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 TIMM21Q9BVV7 248 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 HSPG2P98160 4391 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 APOBP04114 4563 aaKnown RBP3.35□□□□□ -1.87
NXF4-202ENST00000416098 IGLV10-54A0A075B6I4 117 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 A0A0B4J2C4 111 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 K7EMI3 77 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 HIST1H2BKO60814 126 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 HIST1H2BJP06899 126 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 KRTAP10-1P60331 282 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 Q5W150 140 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 SDIM1Q6ZPB5 146 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 ADM2Q7Z4H4 148 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 CDC42SE2Q9NRR3 84 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 UBE2D4Q9Y2X8 147 aa3.35□□□□□ -1.87
NXF4-202ENST00000416098 IGKV3OR2-268A0A0C4DH90 116 aa3.34□□□□□ -1.88
NXF4-202ENST00000416098 LINC00959A0A1B0GUT2 108 aa3.34□□□□□ -1.88
NXF4-202ENST00000416098 MT-ND6P03923 174 aa3.34□□□□□ -1.88
NXF4-202ENST00000416098 IGLV7-43P04211 117 aa3.34□□□□□ -1.88
NXF4-202ENST00000416098 FUSP35637 526 aaKnown RBP eCLIP3.34□□□□□ -1.88
NXF4-202ENST00000416098 SS18Q15532 418 aa3.34□□□□□ -1.88
NXF4-202ENST00000416098 SVBPQ8N300 66 aa3.34□□□□□ -1.88
NXF4-202ENST00000416098 SMCR5Q8TEV8 140 aa3.34□□□□□ -1.88
NXF4-202ENST00000416098 MIEN1Q9BRT3 115 aa3.34□□□□□ -1.88
NXF4-202ENST00000416098 TTTY13Q9BZ97 58 aa3.34□□□□□ -1.88
NXF4-202ENST00000416098 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.33□□□□□ -1.88
NXF4-202ENST00000416098 TCL1BO95988 128 aa3.33□□□□□ -1.88
NXF4-202ENST00000416098 APOC3P02656 99 aa3.33□□□□□ -1.88
NXF4-202ENST00000416098 IFI27P40305 119 aaPredicted RBP3.33□□□□□ -1.88
NXF4-202ENST00000416098 CNBPP62633 177 aaKnown RBP3.33□□□□□ -1.88
NXF4-202ENST00000416098 MRPS36P82909 103 aaKnown RBP3.33□□□□□ -1.88
NXF4-202ENST00000416098 Q6ZSA8 131 aa3.33□□□□□ -1.88
NXF4-202ENST00000416098 Q8N8P6 123 aa3.33□□□□□ -1.88
NXF4-202ENST00000416098 C9orf163Q8N9P6 203 aa3.33□□□□□ -1.88
NXF4-202ENST00000416098 NXT2Q9NPJ8 142 aaKnown RBP3.33□□□□□ -1.88
NXF4-202ENST00000416098 LINC01549A6NIU2 74 aa3.32□□□□□ -1.88
NXF4-202ENST00000416098 KRTAP1-4P0C5Y4 121 aa3.32□□□□□ -1.88
NXF4-202ENST00000416098 DNAH8Q96JB1 4490 aa3.32□□□□□ -1.88
NXF4-202ENST00000416098 PCLOQ9Y6V0 5065 aa3.31□□□□□ -1.88
NXF4-202ENST00000416098 IGLV4-69A0A075B6H9 119 aa3.31□□□□□ -1.88
NXF4-202ENST00000416098 GVQW2A0A096LPI5 108 aaPredicted RBP3.31□□□□□ -1.88
NXF4-202ENST00000416098 A8MUU9 505 aa3.31□□□□□ -1.88
NXF4-202ENST00000416098 ZNF861PO60384 105 aa3.31□□□□□ -1.88
NXF4-202ENST00000416098 XCL1P47992 114 aa3.31□□□□□ -1.88
NXF4-202ENST00000416098 RPL39P62891 51 aaKnown RBP3.31□□□□□ -1.88
NXF4-202ENST00000416098 Q6ZUT4 128 aa3.31□□□□□ -1.88
NXF4-202ENST00000416098 H3BQ85 93 aa3.3□□□□□ -1.88
NXF4-202ENST00000416098 TMEM141Q96I45 108 aa3.3□□□□□ -1.88
NXF4-202ENST00000416098 IGHV3-64A0A075B6Q5 118 aa3.29□□□□□ -1.88
NXF4-202ENST00000416098 LINC01546A6NGU7 62 aa3.29□□□□□ -1.88
NXF4-202ENST00000416098 IGIPA6NJ69 53 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 UQCRQO14949 82 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 AKR1D1P51857 326 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 SEC11AP67812 179 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 CIRBPQ14011 172 aaKnown RBP3.28□□□□□ -1.88
NXF4-202ENST00000416098 Q5VSD8 79 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 ST20-AS1Q8NBB2 130 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 AMELXQ99217 191 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 CST9LQ9H4G1 147 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 SMCO4Q9NRQ5 59 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 ABCA13Q86UQ4 5058 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 H3BPC8 53 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 UBE2D1P51668 147 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 C2orf91Q6ZV80 131 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 C5orf38Q86SI9 138 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 NHP2Q9NX24 153 aaKnown RBP3.28□□□□□ -1.88
NXF4-202ENST00000416098 LINC00474Q9P2X8 69 aa3.28□□□□□ -1.88
NXF4-202ENST00000416098 FAT1Q14517 4588 aa3.27□□□□□ -1.89
NXF4-202ENST00000416098 H3BT86 120 aa3.27□□□□□ -1.89
NXF4-202ENST00000416098 SMR3BP02814 79 aaPredicted RBP3.27□□□□□ -1.89
NXF4-202ENST00000416098 HAMPP81172 84 aa3.27□□□□□ -1.89
NXF4-202ENST00000416098 COX6A2Q02221 97 aa3.27□□□□□ -1.89
NXF4-202ENST00000416098 C18orf32Q8TCD1 76 aa3.27□□□□□ -1.89
NXF4-202ENST00000416098 SPACA4Q8TDM5 124 aa3.27□□□□□ -1.89
NXF4-202ENST00000416098 VPS13BQ7Z7G8 4022 aa3.26□□□□□ -1.89
NXF4-202ENST00000416098 K7ERJ3 54 aa3.26□□□□□ -1.89
NXF4-202ENST00000416098 SPAG11BQ08648 103 aa3.26□□□□□ -1.89
NXF4-202ENST00000416098 SPANXDQ9BXN6 97 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms