RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 UTP20O75691 2785 aaKnown RBP8.88□□□□□ -0.99
SCN1B-202ENST00000415950 C1orf64Q8NEQ6 169 aa8.88□□□□□ -0.99
SCN1B-202ENST00000415950 LINC00474Q9P2X8 69 aa8.88□□□□□ -0.99
SCN1B-202ENST00000415950 PRO0628Q9UI54 55 aa8.87□□□□□ -0.99
SCN1B-202ENST00000415950 C22orf24Q9Y442 160 aa8.87□□□□□ -0.99
SCN1B-202ENST00000415950 ZFHX4Q86UP3 3567 aa8.87□□□□□ -0.99
SCN1B-202ENST00000415950 STAB1Q9NY15 2570 aa8.87□□□□□ -0.99
SCN1B-202ENST00000415950 CELSR2Q9HCU4 2923 aa8.87□□□□□ -0.99
SCN1B-202ENST00000415950 CXCL6P80162 114 aa8.86□□□□□ -0.99
SCN1B-202ENST00000415950 C2orf48Q96LS8 159 aa8.86□□□□□ -0.99
SCN1B-202ENST00000415950 MUC3AQ02505 3323 aa8.85□□□□□ -0.99
SCN1B-202ENST00000415950 LINC01561Q8N1V8 128 aa8.85□□□□□ -0.99
SCN1B-202ENST00000415950 TM2D3Q9BRN9 247 aa8.84□□□□□ -0.99
SCN1B-202ENST00000415950 C6orf48Q9UBA6 75 aa8.84□□□□□ -0.99
SCN1B-202ENST00000415950 SETXQ7Z333 2677 aaKnown RBP8.83□□□□□ -1
SCN1B-202ENST00000415950 IGKV2D-30A0A075B6S6 120 aa8.82□□□□□ -1
SCN1B-202ENST00000415950 IGKV2-30P06310 120 aa8.82□□□□□ -1
SCN1B-202ENST00000415950 LINC00167Q96N53 147 aa8.82□□□□□ -1
SCN1B-202ENST00000415950 hDV103S1A0JD37 113 aa8.81□□□□□ -1
SCN1B-202ENST00000415950 NF1P21359 2839 aa8.81□□□□□ -1
SCN1B-202ENST00000415950 BAHCC1Q9P281 2608 aa8.8□□□□□ -1
SCN1B-202ENST00000415950 SPAG11AQ6PDA7 123 aa8.8□□□□□ -1
SCN1B-202ENST00000415950 RELNP78509 3460 aa8.8□□□□□ -1
SCN1B-202ENST00000415950 CR1P17927 2039 aa8.79□□□□□ -1
SCN1B-202ENST00000415950 KLK9Q2XQG4 91 aa8.79□□□□□ -1
SCN1B-202ENST00000415950 LAMA5O15230 3695 aa8.79□□□□□ -1
SCN1B-202ENST00000415950 IGLV5-52A0A0A0MRZ9 124 aa8.78□□□□□ -1
SCN1B-202ENST00000415950 NSD1Q96L73 2696 aaPredicted RBP8.78□□□□□ -1
SCN1B-202ENST00000415950 Q6ZQT0 140 aa8.78□□□□□ -1
SCN1B-202ENST00000415950 IGSF10Q6WRI0 2623 aa8.78□□□□□ -1
SCN1B-202ENST00000415950 FSHBP01225 129 aa8.77□□□□□ -1.01
SCN1B-202ENST00000415950 ST20-AS1Q8NBB2 130 aa8.77□□□□□ -1.01
SCN1B-202ENST00000415950 RPS28P62857 69 aaKnown RBP8.76□□□□□ -1.01
SCN1B-202ENST00000415950 FBN2P35556 2912 aa8.76□□□□□ -1.01
SCN1B-202ENST00000415950 C16orf95Q9H693 158 aa8.75□□□□□ -1.01
SCN1B-202ENST00000415950 RPL37AP61513 92 aaKnown RBP8.74□□□□□ -1.01
SCN1B-202ENST00000415950 LIMD2Q9BT23 127 aa8.74□□□□□ -1.01
SCN1B-202ENST00000415950 FLG2Q5D862 2391 aaPredicted RBP8.74□□□□□ -1.01
SCN1B-202ENST00000415950 CUBNO60494 3623 aa8.73□□□□□ -1.01
SCN1B-202ENST00000415950 IGLV8-61A0A075B6I0 122 aa8.73□□□□□ -1.01
SCN1B-202ENST00000415950 MOBPQ13875 183 aa8.72□□□□□ -1.01
SCN1B-202ENST00000415950 Q8NBF4 154 aa8.72□□□□□ -1.01
SCN1B-202ENST00000415950 CRYBG3Q68DQ2 2970 aa8.72□□□□□ -1.01
SCN1B-202ENST00000415950 ELOF1P60002 83 aaKnown RBP8.72□□□□□ -1.01
SCN1B-202ENST00000415950 LINC00476Q8WZB0 136 aa8.72□□□□□ -1.01
SCN1B-202ENST00000415950 NUPR2A6NF83 97 aa8.72□□□□□ -1.01
SCN1B-202ENST00000415950 FAM104AQ969W3 186 aa8.71□□□□□ -1.01
SCN1B-202ENST00000415950 HIVEP1P15822 2718 aa8.71□□□□□ -1.02
SCN1B-202ENST00000415950 SPACA4Q8TDM5 124 aa8.7□□□□□ -1.02
SCN1B-202ENST00000415950 A0A1B0GU69 56 aa8.7□□□□□ -1.02
SCN1B-202ENST00000415950 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
SCN1B-202ENST00000415950 F8WDY8 70 aa8.68□□□□□ -1.02
SCN1B-202ENST00000415950 PHF5AQ7RTV0 110 aaKnown RBP8.68□□□□□ -1.02
SCN1B-202ENST00000415950 A0A0G2JQZ4 141 aa8.68□□□□□ -1.02
SCN1B-202ENST00000415950 A0A1W2PNN7 141 aa8.68□□□□□ -1.02
SCN1B-202ENST00000415950 TRBV7-4A0A0J9YYF1 115 aa8.67□□□□□ -1.02
SCN1B-202ENST00000415950 LOC110117498A0A087WWA1 95 aa8.67□□□□□ -1.02
SCN1B-202ENST00000415950 Q6ZRX8 168 aa8.67□□□□□ -1.02
SCN1B-202ENST00000415950 A8MUN3 132 aa8.66□□□□□ -1.02
SCN1B-202ENST00000415950 DMDP11532 3685 aa8.66□□□□□ -1.02
SCN1B-202ENST00000415950 BCE1O60756 84 aa8.66□□□□□ -1.02
SCN1B-202ENST00000415950 LINC00336Q6ZUF6 198 aa8.66□□□□□ -1.02
SCN1B-202ENST00000415950 CHTF8P0CG12 524 aa8.65□□□□□ -1.02
SCN1B-202ENST00000415950 CYSTM1Q9H1C7 97 aa8.65□□□□□ -1.02
SCN1B-202ENST00000415950 DCHS2Q6V1P9 2916 aa8.65□□□□□ -1.02
SCN1B-202ENST00000415950 C1orf134Q5TEV5 83 aa8.65□□□□□ -1.02
SCN1B-202ENST00000415950 ATP11AUNQ6ZP68 121 aa8.65□□□□□ -1.02
SCN1B-202ENST00000415950 TRAV22A0A0B4J277 110 aa8.65□□□□□ -1.03
SCN1B-202ENST00000415950 ITPR2Q14571 2701 aa8.65□□□□□ -1.03
SCN1B-202ENST00000415950 C7orf65Q6ZTY9 151 aa8.64□□□□□ -1.03
SCN1B-202ENST00000415950 Q6ZRP5 223 aa8.64□□□□□ -1.03
SCN1B-202ENST00000415950 CSMD1Q96PZ7 3565 aa8.63□□□□□ -1.03
SCN1B-202ENST00000415950 K7EQZ3 153 aa8.63□□□□□ -1.03
SCN1B-202ENST00000415950 CSNK1G2-AS1Q8NCQ2 148 aa8.63□□□□□ -1.03
SCN1B-202ENST00000415950 FAM168BA1KXE4 195 aa8.62□□□□□ -1.03
SCN1B-202ENST00000415950 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
SCN1B-202ENST00000415950 CELSR1Q9NYQ6 3014 aa8.61□□□□□ -1.03
SCN1B-202ENST00000415950 VPREB1P12018 145 aa8.61□□□□□ -1.03
SCN1B-202ENST00000415950 ACYP2P14621 99 aa8.61□□□□□ -1.03
SCN1B-202ENST00000415950 SERTAD4-AS1Q5TG53 156 aa8.6□□□□□ -1.03
SCN1B-202ENST00000415950 H7BZZ5 65 aa8.6□□□□□ -1.03
SCN1B-202ENST00000415950 TP53AIP1Q9HCN2 124 aa8.6□□□□□ -1.03
SCN1B-202ENST00000415950 MDFIQ99750 246 aa8.59□□□□□ -1.03
SCN1B-202ENST00000415950 STAB2Q8WWQ8 2551 aa8.59□□□□□ -1.03
SCN1B-202ENST00000415950 IGLV6-57P01721 117 aa8.59□□□□□ -1.03
SCN1B-202ENST00000415950 Q8NAQ8 132 aa8.57□□□□□ -1.04
SCN1B-202ENST00000415950 C19orf73Q9NVV2 129 aa8.57□□□□□ -1.04
SCN1B-202ENST00000415950 APCP25054 2843 aa8.57□□□□□ -1.04
SCN1B-202ENST00000415950 LINC00588Q9Y4M8 146 aa8.55□□□□□ -1.04
SCN1B-202ENST00000415950 SMG1Q96Q15 3661 aaKnown RBP8.55□□□□□ -1.04
SCN1B-202ENST00000415950 A0A096LNT2 108 aa8.55□□□□□ -1.04
SCN1B-202ENST00000415950 A0A1B0GW54 56 aa8.53□□□□□ -1.04
SCN1B-202ENST00000415950 HRNRQ86YZ3 2850 aaPredicted RBP8.53□□□□□ -1.04
SCN1B-202ENST00000415950 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
SCN1B-202ENST00000415950 KLKP1Q107X0 134 aa8.51□□□□□ -1.05
SCN1B-202ENST00000415950 COA5Q86WW8 74 aa8.51□□□□□ -1.05
SCN1B-202ENST00000415950 H3BPC8 53 aa8.5□□□□□ -1.05
SCN1B-202ENST00000415950 SVEP1Q4LDE5 3571 aa8.5□□□□□ -1.05
SCN1B-202ENST00000415950 GVQW2A0A096LPI5 108 aaPredicted RBP8.5□□□□□ -1.05
SCN1B-202ENST00000415950 LINC00313P59037 77 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms