RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 SYS1-DBNDD2H3BUS1 97 aa5.66□□□□□ -1.5
LINC01090-201ENST00000415357 SMIM6P0DI80 62 aa5.66□□□□□ -1.5
LINC01090-201ENST00000415357 LGALS3P17931 250 aaKnown RBP5.66□□□□□ -1.5
LINC01090-201ENST00000415357 LINC00587B1AMM8 73 aa5.65□□□□□ -1.5
LINC01090-201ENST00000415357 KRTAP13-2Q52LG2 175 aa5.65□□□□□ -1.5
LINC01090-201ENST00000415357 HIGD2AQ9BW72 106 aa5.65□□□□□ -1.5
LINC01090-201ENST00000415357 TRBV10-3A0A0K0K1G6 114 aa5.64□□□□□ -1.51
LINC01090-201ENST00000415357 E9PLD3 99 aa5.64□□□□□ -1.51
LINC01090-201ENST00000415357 PRYO14603 147 aa5.64□□□□□ -1.51
LINC01090-201ENST00000415357 TSPAN13O95857 204 aa5.64□□□□□ -1.51
LINC01090-201ENST00000415357 CRYGAP11844 174 aa5.64□□□□□ -1.51
LINC01090-201ENST00000415357 NMUP48645 174 aa5.64□□□□□ -1.51
LINC01090-201ENST00000415357 AKR1D1P51857 326 aa5.64□□□□□ -1.51
LINC01090-201ENST00000415357 TYMSOSQ8TAI1 123 aa5.64□□□□□ -1.51
LINC01090-201ENST00000415357 A0A0J9YXY3 114 aa5.63□□□□□ -1.51
LINC01090-201ENST00000415357 C3orf79P0CE67 100 aa5.63□□□□□ -1.51
LINC01090-201ENST00000415357 NPC2P61916 151 aa5.63□□□□□ -1.51
LINC01090-201ENST00000415357 LINC01545Q5VT33 79 aa5.63□□□□□ -1.51
LINC01090-201ENST00000415357 IGKV2D-26A0A0A0MRZ7 120 aa5.62□□□□□ -1.51
LINC01090-201ENST00000415357 ADAMTSL4-AS1Q5T5F5 129 aa5.62□□□□□ -1.51
LINC01090-201ENST00000415357 SOSTDC1Q6X4U4 206 aa5.62□□□□□ -1.51
LINC01090-201ENST00000415357 LOC107984156A0A0G2JMH3 177 aa5.61□□□□□ -1.51
LINC01090-201ENST00000415357 KRTAP4-16G5E9R7 235 aaPredicted RBP5.61□□□□□ -1.51
LINC01090-201ENST00000415357 SPRR1AP35321 89 aa5.61□□□□□ -1.51
LINC01090-201ENST00000415357 KRTDAPP60985 99 aa5.61□□□□□ -1.51
LINC01090-201ENST00000415357 PRR4Q16378 134 aa5.61□□□□□ -1.51
LINC01090-201ENST00000415357 FAM229BQ4G0N7 80 aa5.61□□□□□ -1.51
LINC01090-201ENST00000415357 COA6Q5JTJ3 125 aaKnown RBP5.61□□□□□ -1.51
LINC01090-201ENST00000415357 PET117Q6UWS5 81 aa5.61□□□□□ -1.51
LINC01090-201ENST00000415357 ARL17AQ8IVW1 177 aa5.61□□□□□ -1.51
LINC01090-201ENST00000415357 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
LINC01090-201ENST00000415357 MIEN1Q9BRT3 115 aa5.61□□□□□ -1.51
LINC01090-201ENST00000415357 TTTY13Q9BZ97 58 aa5.61□□□□□ -1.51
LINC01090-201ENST00000415357 KCNQ1DNQ9H478 68 aa5.61□□□□□ -1.51
LINC01090-201ENST00000415357 ETDCA0A1B0GVM5 59 aa5.6□□□□□ -1.51
LINC01090-201ENST00000415357 DDTP30046 118 aa5.6□□□□□ -1.51
LINC01090-201ENST00000415357 C3orf22Q8N5N4 141 aa5.6□□□□□ -1.51
LINC01090-201ENST00000415357 LINC00337Q8N6G1 96 aa5.6□□□□□ -1.51
LINC01090-201ENST00000415357 SPRR4Q96PI1 79 aa5.6□□□□□ -1.51
LINC01090-201ENST00000415357 TRBV10-2A0A0K0K1G8 114 aa5.59□□□□□ -1.51
LINC01090-201ENST00000415357 LITAFQ99732 161 aa5.59□□□□□ -1.51
LINC01090-201ENST00000415357 SPANXB1Q9NS25 103 aaPredicted RBP5.59□□□□□ -1.51
LINC01090-201ENST00000415357 RNF213Q63HN8 5207 aa5.59□□□□□ -1.51
LINC01090-201ENST00000415357 ZNF815PA8K554 130 aa5.58□□□□□ -1.52
LINC01090-201ENST00000415357 NDUFC2O95298 119 aa5.58□□□□□ -1.52
LINC01090-201ENST00000415357 LINC00304Q8N9R0 145 aa5.58□□□□□ -1.52
LINC01090-201ENST00000415357 SMCR5Q8TEV8 140 aa5.58□□□□□ -1.52
LINC01090-201ENST00000415357 PPDPFQ9H3Y8 114 aa5.58□□□□□ -1.52
LINC01090-201ENST00000415357 ERC2-IT1O76042 136 aa5.57□□□□□ -1.52
LINC01090-201ENST00000415357 IGLV6-57P01721 117 aa5.57□□□□□ -1.52
LINC01090-201ENST00000415357 S100A7L2Q5SY68 101 aa5.57□□□□□ -1.52
LINC01090-201ENST00000415357 ATOH7Q8N100 152 aa5.57□□□□□ -1.52
LINC01090-201ENST00000415357 LINC00308Q8TCZ7 52 aa5.56□□□□□ -1.52
LINC01090-201ENST00000415357 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
LINC01090-201ENST00000415357 Q9BRP9 147 aa5.56□□□□□ -1.52
LINC01090-201ENST00000415357 ZNF706Q9Y5V0 76 aaPredicted RBP5.56□□□□□ -1.52
LINC01090-201ENST00000415357 TRAV23DV6A0A075B6W5 121 aa5.55□□□□□ -1.52
LINC01090-201ENST00000415357 C20orf202A1L168 122 aa5.55□□□□□ -1.52
LINC01090-201ENST00000415357 TIMM17BO60830 172 aa5.55□□□□□ -1.52
LINC01090-201ENST00000415357 GAGE2AQ6NT46 116 aa5.54□□□□□ -1.52
LINC01090-201ENST00000415357 Q6ZRX8 168 aa5.54□□□□□ -1.52
LINC01090-201ENST00000415357 SPANXCQ9NY87 97 aa5.54□□□□□ -1.52
LINC01090-201ENST00000415357 ZNF73O43830 326 aaPredicted RBP5.53□□□□□ -1.52
LINC01090-201ENST00000415357 HIST3H2BBQ8N257 126 aa5.53□□□□□ -1.52
LINC01090-201ENST00000415357 OR13C6PQ8NH95 151 aa5.53□□□□□ -1.52
LINC01090-201ENST00000415357 CBY1Q9Y3M2 126 aa5.53□□□□□ -1.52
LINC01090-201ENST00000415357 LINC00483Q53H64 154 aa5.52□□□□□ -1.53
LINC01090-201ENST00000415357 SCGB1D4Q6XE38 83 aa5.52□□□□□ -1.53
LINC01090-201ENST00000415357 PCP2Q8IVA1 136 aa5.52□□□□□ -1.53
LINC01090-201ENST00000415357 IGLV9-49A0A0B4J1Y8 123 aa5.51□□□□□ -1.53
LINC01090-201ENST00000415357 Q8NBF4 154 aa5.51□□□□□ -1.53
LINC01090-201ENST00000415357 HIST1H2BLQ99880 126 aa5.51□□□□□ -1.53
LINC01090-201ENST00000415357 SPANXDQ9BXN6 97 aa5.51□□□□□ -1.53
LINC01090-201ENST00000415357 MOBPQ13875 183 aa5.5□□□□□ -1.53
LINC01090-201ENST00000415357 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
LINC01090-201ENST00000415357 C5orf52A6NGY3 159 aa5.49□□□□□ -1.53
LINC01090-201ENST00000415357 S100A2P29034 98 aa5.49□□□□□ -1.53
LINC01090-201ENST00000415357 JOSD1Q15040 202 aaPredicted RBP5.49□□□□□ -1.53
LINC01090-201ENST00000415357 IGLV7-46A0A075B6I9 117 aa5.47□□□□□ -1.53
LINC01090-201ENST00000415357 HINT1P49773 126 aaPredicted RBP5.47□□□□□ -1.53
LINC01090-201ENST00000415357 C6orf99Q4VX62 202 aa5.47□□□□□ -1.53
LINC01090-201ENST00000415357 SPAG11AQ6PDA7 123 aa5.47□□□□□ -1.53
LINC01090-201ENST00000415357 MUSTN1Q8IVN3 82 aa5.47□□□□□ -1.53
LINC01090-201ENST00000415357 TSTD3H0UI37 97 aa5.46□□□□□ -1.54
LINC01090-201ENST00000415357 SNRPEP62304 92 aaKnown RBP5.46□□□□□ -1.54
LINC01090-201ENST00000415357 C9orf153Q5TBE3 101 aa5.46□□□□□ -1.54
LINC01090-201ENST00000415357 IFITM1P13164 125 aa5.45□□□□□ -1.54
LINC01090-201ENST00000415357 COX7BP24311 80 aa5.45□□□□□ -1.54
LINC01090-201ENST00000415357 ELOF1P60002 83 aaKnown RBP5.45□□□□□ -1.54
LINC01090-201ENST00000415357 A6NDN8 102 aa5.44□□□□□ -1.54
LINC01090-201ENST00000415357 Q6ZVH6 145 aa5.44□□□□□ -1.54
LINC01090-201ENST00000415357 SSBP3-AS1Q7Z2R9 100 aa5.44□□□□□ -1.54
LINC01090-201ENST00000415357 COPS9Q8WXC6 57 aa5.44□□□□□ -1.54
LINC01090-201ENST00000415357 MUC2Q02817 5179 aa5.43□□□□□ -1.54
LINC01090-201ENST00000415357 A0A1B0GV90 55 aa5.43□□□□□ -1.54
LINC01090-201ENST00000415357 HSBP1L1C9JCN9 74 aa5.43□□□□□ -1.54
LINC01090-201ENST00000415357 SPINK1P00995 79 aa5.43□□□□□ -1.54
LINC01090-201ENST00000415357 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
LINC01090-201ENST00000415357 DHRS4-AS1Q9P1J3 65 aa5.43□□□□□ -1.54
LINC01090-201ENST00000415357 SCGB1D1O95968 90 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms