RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 PKIAP61925 76 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 FAM74A4Q5TZK3 123 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 ARL17AQ8IVW1 177 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 TMEM70Q9BUB7 260 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 VAMP8Q9BV40 100 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 HBDP02042 147 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 ZNF56Q15929 161 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 Q8N8P6 123 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 HIGD2AQ9BW72 106 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 PRO1933Q9H354 126 aa1.47□□□□□ -2.17
MCF2-204ENST00000414978 IGLV4-60A0A075B6I1 120 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 H3BPC8 53 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 CCDC179H3BU77 68 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 SYS1-DBNDD2H3BUS1 97 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 M0R2P5 195 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 MIAQ16674 131 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 LCA10Q71F78 164 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 C20orf78Q9BR46 151 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 SMIM2Q9BVW6 85 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 FAT4Q6V0I7 4981 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 UBR4Q5T4S7 5183 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 A8MWV9 139 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 H7C2G1 150 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 J3KT08 172 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 ZNF25P17030 456 aaPredicted RBP1.46□□□□□ -2.18
MCF2-204ENST00000414978 FCER1GP30273 86 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 XCL1P47992 114 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 RPL39LQ96EH5 51 aaKnown RBP1.46□□□□□ -2.18
MCF2-204ENST00000414978 LINC00467Q9BRT7 94 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 KRTAP1-5Q9BYS1 174 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 WFDC10AQ9H1F0 79 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 ST20Q9HBF5 79 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 A0A1W2PNN7 141 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 K7EMI3 77 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 HIST1H4AP62805 103 aaKnown RBP1.46□□□□□ -2.18
MCF2-204ENST00000414978 Q5VSD8 79 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 ATOH7Q8N100 152 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 IFI27L1Q96BM0 104 aa1.46□□□□□ -2.18
MCF2-204ENST00000414978 LINC01546A6NGU7 62 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 SPATA45Q537H7 98 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 SMCR5Q8TEV8 140 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 TMEM263Q8WUH6 116 aaKnown RBP1.45□□□□□ -2.18
MCF2-204ENST00000414978 SNHG12Q9BXW3 62 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 TRGV1A0A0A0MS02 117 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 M0QY20 66 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 RRN3P1Q2M238 152 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 LINC01545Q5VT33 79 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 PMCHL2Q9BQD1 86 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 ANAPC11Q9NYG5 84 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 TRBV6-5A0A0K0K1A5 114 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 A0A1W2PNM2 257 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 LINC01549A6NIU2 74 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 IGLV6-57P01721 117 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 CFAP126Q5VTH2 177 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 Q8NAQ8 132 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 CST9LQ9H4G1 147 aa1.45□□□□□ -2.18
MCF2-204ENST00000414978 NOP10Q9NPE3 64 aaKnown RBP1.45□□□□□ -2.18
MCF2-204ENST00000414978 TRGV2A0A075B6R0 118 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 TRAV7A0A075B6U4 112 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 TRBV27A0A0K0K1C4 114 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 I3L3M4 83 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 KRTAP1-4P0C5Y4 121 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 POLR2KP53803 58 aaKnown RBP1.44□□□□□ -2.18
MCF2-204ENST00000414978 UBE2BP63146 152 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 DPH3Q96FX2 82 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 UQCR10Q9UDW1 63 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 K7ERU9 68 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 TIMM17BO60830 172 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 LGALS3P17931 250 aaKnown RBP1.44□□□□□ -2.18
MCF2-204ENST00000414978 RHOHQ15669 191 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 KRTAP26-1Q6PEX3 210 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 Q6ZTI0 123 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 DEFB104AQ8WTQ1 72 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 PRADC1Q9BSG0 188 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 MUC17Q685J3 4493 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 TRAV10A0A0B4J240 114 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 IGKV2-24A0A0C4DH68 120 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 FAM236AA0A1B0GUQ0 79 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 FAM236BA0A1B0GV22 79 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 DPM2O94777 84 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 IGKCP01834 107 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 IGLC3P0DOY3 106 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 PLNP26678 52 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 C1orf134Q5TEV5 83 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 TMEM141Q96I45 108 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 RETNLBQ9BQ08 111 aa1.44□□□□□ -2.18
MCF2-204ENST00000414978 TRAV12-1A0A0B4J245 112 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 TRGV4A0A0C4DH28 118 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 TRBV10-1A0A0K0K1A3 114 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 RPL39P62891 51 aaKnown RBP1.43□□□□□ -2.18
MCF2-204ENST00000414978 DEFB135Q30KP9 77 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 LCE3EQ5T5B0 92 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 HHLA3Q9XRX5 114 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 TRBV7-3A0A075B6L6 115 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 F8VRH5 84 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 M0R143 59 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 DEFB130BP0DP73 79 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 DEFB130AP0DP74 79 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 KRTAP20-1Q3LI63 56 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 IMUPQ9GZP8 106 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms