RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 COPS9Q8WXC6 57 aa12.01□□□□□ -0.49
LMBR1-203ENST00000414218 LINC00304Q8N9R0 145 aa12□□□□□ -0.49
LMBR1-203ENST00000414218 LINC00308Q8TCZ7 52 aa12□□□□□ -0.49
LMBR1-203ENST00000414218 PAM16Q9Y3D7 125 aa12□□□□□ -0.49
LMBR1-203ENST00000414218 TRBV10-2A0A0K0K1G8 114 aa11.99□□□□□ -0.49
LMBR1-203ENST00000414218 SPANXB1Q9NS25 103 aaPredicted RBP11.99□□□□□ -0.49
LMBR1-203ENST00000414218 SOSTDC1Q6X4U4 206 aa11.98□□□□□ -0.49
LMBR1-203ENST00000414218 HIGD2AQ9BW72 106 aa11.98□□□□□ -0.49
LMBR1-203ENST00000414218 RETNLBQ9BQ08 111 aa11.97□□□□□ -0.49
LMBR1-203ENST00000414218 EIF4EBP3O60516 100 aaPredicted RBP11.95□□□□□ -0.5
LMBR1-203ENST00000414218 SLC25A34Q6PIV7 304 aa11.95□□□□□ -0.5
LMBR1-203ENST00000414218 C3orf22Q8N5N4 141 aa11.95□□□□□ -0.5
LMBR1-203ENST00000414218 C14orf144Q96I85 54 aa11.95□□□□□ -0.5
LMBR1-203ENST00000414218 HIGD1BQ9P298 99 aa11.95□□□□□ -0.5
LMBR1-203ENST00000414218 S100A12P80511 92 aa11.94□□□□□ -0.5
LMBR1-203ENST00000414218 NCR3O14931 201 aa11.93□□□□□ -0.5
LMBR1-203ENST00000414218 LINC00518Q8N0U6 118 aa11.93□□□□□ -0.5
LMBR1-203ENST00000414218 LOC105371267A0A1B0GV96 52 aa11.92□□□□□ -0.5
LMBR1-203ENST00000414218 SMIM6P0DI80 62 aa11.91□□□□□ -0.5
LMBR1-203ENST00000414218 SPRR4Q96PI1 79 aa11.91□□□□□ -0.5
LMBR1-203ENST00000414218 PRYO14603 147 aa11.9□□□□□ -0.5
LMBR1-203ENST00000414218 NPC2P61916 151 aa11.9□□□□□ -0.5
LMBR1-203ENST00000414218 MUSTN1Q8IVN3 82 aa11.9□□□□□ -0.5
LMBR1-203ENST00000414218 KCNQ1DNQ9H478 68 aa11.89□□□□□ -0.51
LMBR1-203ENST00000414218 IGLV6-57P01721 117 aa11.88□□□□□ -0.51
LMBR1-203ENST00000414218 CBY1Q9Y3M2 126 aa11.88□□□□□ -0.51
LMBR1-203ENST00000414218 SPRR1AP35321 89 aa11.87□□□□□ -0.51
LMBR1-203ENST00000414218 CTAG1AP78358 180 aa11.87□□□□□ -0.51
LMBR1-203ENST00000414218 LINC00337Q8N6G1 96 aa11.87□□□□□ -0.51
LMBR1-203ENST00000414218 TRBV10-3A0A0K0K1G6 114 aa11.86□□□□□ -0.51
LMBR1-203ENST00000414218 ZNF706Q9Y5V0 76 aaPredicted RBP11.86□□□□□ -0.51
LMBR1-203ENST00000414218 ETDCA0A1B0GVM5 59 aa11.85□□□□□ -0.51
LMBR1-203ENST00000414218 DDTP30046 118 aa11.85□□□□□ -0.51
LMBR1-203ENST00000414218 TAL2Q16559 108 aa11.85□□□□□ -0.51
LMBR1-203ENST00000414218 C2orf91Q6ZV80 131 aa11.85□□□□□ -0.51
LMBR1-203ENST00000414218 SMCR5Q8TEV8 140 aa11.85□□□□□ -0.51
LMBR1-203ENST00000414218 IGLV7-46A0A075B6I9 117 aa11.84□□□□□ -0.51
LMBR1-203ENST00000414218 KRTAP4-16G5E9R7 235 aaPredicted RBP11.84□□□□□ -0.51
LMBR1-203ENST00000414218 S100A7L2Q5SY68 101 aa11.84□□□□□ -0.51
LMBR1-203ENST00000414218 HIST1H4GQ99525 98 aa11.84□□□□□ -0.51
LMBR1-203ENST00000414218 UQCR10Q9UDW1 63 aa11.83□□□□□ -0.52
LMBR1-203ENST00000414218 MUC2Q02817 5179 aa11.82□□□□□ -0.52
LMBR1-203ENST00000414218 SPAG11AQ6PDA7 123 aa11.82□□□□□ -0.52
LMBR1-203ENST00000414218 TPRXLQ17RH7 258 aa11.8□□□□□ -0.52
LMBR1-203ENST00000414218 CDIP1Q9H305 208 aa11.8□□□□□ -0.52
LMBR1-203ENST00000414218 TRAV13-2A0A0B4J235 113 aa11.79□□□□□ -0.52
LMBR1-203ENST00000414218 C4orf48Q5BLP8 95 aa11.79□□□□□ -0.52
LMBR1-203ENST00000414218 A0A0U1RQV1 116 aa11.78□□□□□ -0.52
LMBR1-203ENST00000414218 A4D1N5 150 aa11.78□□□□□ -0.52
LMBR1-203ENST00000414218 B5MCH6 92 aa11.78□□□□□ -0.52
LMBR1-203ENST00000414218 Q8NBF4 154 aa11.78□□□□□ -0.52
LMBR1-203ENST00000414218 OR13C6PQ8NH95 151 aa11.77□□□□□ -0.53
LMBR1-203ENST00000414218 TRAV23DV6A0A075B6W5 121 aa11.76□□□□□ -0.53
LMBR1-203ENST00000414218 ERC2-IT1O76042 136 aa11.75□□□□□ -0.53
LMBR1-203ENST00000414218 LINC00483Q53H64 154 aa11.75□□□□□ -0.53
LMBR1-203ENST00000414218 GAGE2AQ6NT46 116 aa11.75□□□□□ -0.53
LMBR1-203ENST00000414218 CEND1Q8N111 149 aa11.75□□□□□ -0.53
LMBR1-203ENST00000414218 ZNF73O43830 326 aaPredicted RBP11.73□□□□□ -0.53
LMBR1-203ENST00000414218 TRBV7-6A0A0J9YX20 115 aa11.72□□□□□ -0.53
LMBR1-203ENST00000414218 A6NDN8 102 aa11.72□□□□□ -0.53
LMBR1-203ENST00000414218 HSD52Q0P140 79 aa11.72□□□□□ -0.53
LMBR1-203ENST00000414218 C12orf57Q99622 126 aa11.72□□□□□ -0.53
LMBR1-203ENST00000414218 Q9BRP9 147 aa11.72□□□□□ -0.53
LMBR1-203ENST00000414218 TMEM238LA0A1B0GVL6 79 aa11.71□□□□□ -0.53
LMBR1-203ENST00000414218 A6NJY4 79 aa11.71□□□□□ -0.53
LMBR1-203ENST00000414218 HINT1P49773 126 aaPredicted RBP11.71□□□□□ -0.53
LMBR1-203ENST00000414218 Q6ZRX8 168 aa11.7□□□□□ -0.54
LMBR1-203ENST00000414218 IGLV9-49A0A0B4J1Y8 123 aa11.69□□□□□ -0.54
LMBR1-203ENST00000414218 FP248Q71RG6 208 aaPredicted RBP11.69□□□□□ -0.54
LMBR1-203ENST00000414218 A0A0B4J2C4 111 aa11.68□□□□□ -0.54
LMBR1-203ENST00000414218 SPINK1P00995 79 aa11.68□□□□□ -0.54
LMBR1-203ENST00000414218 CFC1BP0CG36 223 aa11.68□□□□□ -0.54
LMBR1-203ENST00000414218 CFC1P0CG37 223 aa11.68□□□□□ -0.54
LMBR1-203ENST00000414218 MOBPQ13875 183 aa11.68□□□□□ -0.54
LMBR1-203ENST00000414218 PRO1933Q9H354 126 aa11.68□□□□□ -0.54
LMBR1-203ENST00000414218 TSTD3H0UI37 97 aa11.65□□□□□ -0.54
LMBR1-203ENST00000414218 FXYD2P54710 66 aa11.64□□□□□ -0.55
LMBR1-203ENST00000414218 C6orf99Q4VX62 202 aa11.64□□□□□ -0.55
LMBR1-203ENST00000414218 SSBP3-AS1Q7Z2R9 100 aa11.64□□□□□ -0.55
LMBR1-203ENST00000414218 SMIM11BQ8TCY0 68 aa11.64□□□□□ -0.55
LMBR1-203ENST00000414218 ELOF1P60002 83 aaKnown RBP11.63□□□□□ -0.55
LMBR1-203ENST00000414218 MUC17Q685J3 4493 aa11.62□□□□□ -0.55
LMBR1-203ENST00000414218 A0A1B0GWB2 263 aa11.62□□□□□ -0.55
LMBR1-203ENST00000414218 KRTAP13-3Q3SY46 172 aa11.62□□□□□ -0.55
LMBR1-203ENST00000414218 RAB37Q96AX2 223 aa11.62□□□□□ -0.55
LMBR1-203ENST00000414218 DHRS4-AS1Q9P1J3 65 aa11.61□□□□□ -0.55
LMBR1-203ENST00000414218 PRO1854Q9UHT4 67 aa11.61□□□□□ -0.55
LMBR1-203ENST00000414218 COX7BP24311 80 aa11.6□□□□□ -0.55
LMBR1-203ENST00000414218 VAMP3Q15836 100 aa11.6□□□□□ -0.55
LMBR1-203ENST00000414218 LCE2AQ5TA79 106 aaPredicted RBP11.59□□□□□ -0.55
LMBR1-203ENST00000414218 ST20-AS1Q8NBB2 130 aa11.59□□□□□ -0.55
LMBR1-203ENST00000414218 BVES-AS1Q5T3Y7 98 aa11.58□□□□□ -0.56
LMBR1-203ENST00000414218 Q8N377 158 aa11.58□□□□□ -0.56
LMBR1-203ENST00000414218 RPS29P62273 56 aaKnown RBP11.57□□□□□ -0.56
LMBR1-203ENST00000414218 C9orf153Q5TBE3 101 aa11.57□□□□□ -0.56
LMBR1-203ENST00000414218 M0R143 59 aa11.56□□□□□ -0.56
LMBR1-203ENST00000414218 NHP2Q9NX24 153 aaKnown RBP11.55□□□□□ -0.56
LMBR1-203ENST00000414218 SLC25A20O43772 301 aa11.54□□□□□ -0.56
LMBR1-203ENST00000414218 FAT4Q6V0I7 4981 aa11.52□□□□□ -0.57
LMBR1-203ENST00000414218 H0YGX0 51 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms