RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 C11orf68Q9H3H3 251 aaKnown RBP1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 NHP2Q9NX24 153 aaKnown RBP1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 ZNF706Q9Y5V0 76 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 V9GYY9 64 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 TRGV2A0A075B6R0 118 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 TRGV4A0A0C4DH28 118 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 LINC00959A0A1B0GUT2 108 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 K7EIL1 84 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 ZNF73O43830 326 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 DEFB130BP0DP73 79 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 DEFB130AP0DP74 79 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 MIFP14174 115 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 CLPSL2Q6UWE3 100 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 RAB37Q96AX2 223 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 LINC01600Q96MT4 127 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 RBM12B-AS1Q9P1G2 102 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 NDUFA12Q9UI09 145 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 PRO0255Q9UI72 69 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 CMYA5Q8N3K9 4069 aa1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 SETD2Q9BYW2 2564 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P11-201ENST00000413899 ATRQ13535 2644 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 TRAV13-1A0A0B4J241 112 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 TMEM238C9JI98 176 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 TCL1BO95988 128 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 HERVK_113P63121 156 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 WFDC10BQ8IUB3 73 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 MUSTN1Q8IVN3 82 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 DAND5Q8N907 189 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 ATP6V0E2Q8NHE4 81 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 UBE2WQ96B02 151 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 C20orf166-AS1Q96NR2 134 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 C22orf24Q9Y442 160 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 SPCS1Q9Y6A9 102 aa1.47□□□□□ -2.17
HMGB1P11-201ENST00000413899 TRRAPQ9Y4A5 3859 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 ANK2Q01484 3957 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 STAB1Q9NY15 2570 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 LOC107984156A0A0G2JMH3 177 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 H3BNG1 76 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 APOMO95445 188 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 ATP5G1P05496 136 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 SMIM13P0DJ93 91 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 SCGB1C2P0DMR2 95 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 DAD1P61803 113 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 NPC2P61916 151 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 WFDC2Q14508 124 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 VAMP3Q15836 100 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 OCIAD2Q56VL3 154 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 LELP1Q5T871 98 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 ENHOQ6UWT2 76 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 C2orf82Q6UX34 121 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 SCGB1D4Q6XE38 83 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 FAM19A1Q7Z5A9 133 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 C5orf38Q86SI9 138 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 ARL17AQ8IVW1 177 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 LINC00308Q8TCZ7 52 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 COX7B2Q8TF08 81 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 CARD19Q96LW7 228 aa1.46□□□□□ -2.18
HMGB1P11-201ENST00000413899 IGKV3OR2-268A0A0C4DH90 116 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 TRBV30A0A0K0K1B3 111 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 H3BMG7 143 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 LST1O00453 97 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 UBE2L6O14933 153 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 SPART-AS1P0CW21 52 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 FABP2P12104 132 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 IFITM1P13164 125 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 HTN3P15516 51 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 XCL1P47992 114 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 CCL18P55774 89 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 SS18Q15532 418 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 ESRGQ1W209 222 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 SFTA2Q6UW10 78 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 LYPD5Q6UWN5 251 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 Q8IZM0 81 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 LINC00269Q8N2A0 174 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 ANKRD29Q8N6D5 301 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 C6orf48Q9UBA6 75 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 PRO1854Q9UHT4 67 aa1.45□□□□□ -2.18
HMGB1P11-201ENST00000413899 FLNBO75369 2602 aaKnown RBP1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 GVQW2A0A096LPI5 108 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 IBA57-AS1B1ANH7 110 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 M0QXV9 152 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 SPAG11BQ08648 103 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 SMAGPQ0VAQ4 97 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 ETDBQ3ZM63 59 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 C9orf116Q5BN46 136 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 LINC01556Q5JQF7 62 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 GTF2H5Q6ZYL4 71 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 C3orf56Q8N813 242 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 CLEC2BQ92478 149 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 LINC00526Q96FQ7 95 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 ERG28Q9UKR5 140 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 LINC00588Q9Y4M8 146 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 PKD1L1Q8TDX9 2849 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 COL7A1Q02388 2944 aa1.44□□□□□ -2.18
HMGB1P11-201ENST00000413899 HUWE1Q7Z6Z7 4374 aaKnown RBP1.43□□□□□ -2.18
HMGB1P11-201ENST00000413899 DEFB131BA0A096LNP1 70 aa1.43□□□□□ -2.18
HMGB1P11-201ENST00000413899 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P11-201ENST00000413899 C9JAW5 83 aa1.43□□□□□ -2.18
HMGB1P11-201ENST00000413899 H7C2G1 150 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms