RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 RPL37AP8A6NKH3 93 aa4.99□□□□□ -1.61
UPF3AP1-201ENST00000413731 LINC00587B1AMM8 73 aa4.99□□□□□ -1.61
UPF3AP1-201ENST00000413731 E9PLD3 99 aa4.99□□□□□ -1.61
UPF3AP1-201ENST00000413731 IGLV7-43P04211 117 aa4.99□□□□□ -1.61
UPF3AP1-201ENST00000413731 LINC01547P58512 204 aaPredicted RBP4.99□□□□□ -1.61
UPF3AP1-201ENST00000413731 MIR7-3HGQ8N6C7 128 aa4.99□□□□□ -1.61
UPF3AP1-201ENST00000413731 IGKV2-28A0A075B6P5 120 aa4.98□□□□□ -1.61
UPF3AP1-201ENST00000413731 IGKV2D-28P01615 120 aa4.98□□□□□ -1.61
UPF3AP1-201ENST00000413731 LINC00167Q96N53 147 aa4.98□□□□□ -1.61
UPF3AP1-201ENST00000413731 MIEN1Q9BRT3 115 aa4.98□□□□□ -1.61
UPF3AP1-201ENST00000413731 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
UPF3AP1-201ENST00000413731 IGKV2D-26A0A0A0MRZ7 120 aa4.97□□□□□ -1.61
UPF3AP1-201ENST00000413731 BOD1L2Q8IYS8 172 aa4.97□□□□□ -1.61
UPF3AP1-201ENST00000413731 DAND5Q8N907 189 aa4.97□□□□□ -1.61
UPF3AP1-201ENST00000413731 DIRC1Q969H9 104 aa4.97□□□□□ -1.61
UPF3AP1-201ENST00000413731 NCR3O14931 201 aa4.96□□□□□ -1.62
UPF3AP1-201ENST00000413731 BCE1O60756 84 aa4.96□□□□□ -1.62
UPF3AP1-201ENST00000413731 AKR1D1P51857 326 aa4.96□□□□□ -1.62
UPF3AP1-201ENST00000413731 SEC61GP60059 68 aa4.96□□□□□ -1.62
UPF3AP1-201ENST00000413731 TTTY13Q9BZ97 58 aa4.96□□□□□ -1.62
UPF3AP1-201ENST00000413731 A0A0J9YXY3 114 aa4.95□□□□□ -1.62
UPF3AP1-201ENST00000413731 ZNF815PA8K554 130 aa4.95□□□□□ -1.62
UPF3AP1-201ENST00000413731 H0Y9J4 135 aa4.95□□□□□ -1.62
UPF3AP1-201ENST00000413731 RPL28P46779 137 aaKnown RBP4.95□□□□□ -1.62
UPF3AP1-201ENST00000413731 UBE2AP49459 152 aa4.95□□□□□ -1.62
UPF3AP1-201ENST00000413731 Q8NDZ9 215 aa4.95□□□□□ -1.62
UPF3AP1-201ENST00000413731 NPC2P61916 151 aa4.94□□□□□ -1.62
UPF3AP1-201ENST00000413731 PRR4Q16378 134 aa4.94□□□□□ -1.62
UPF3AP1-201ENST00000413731 IGLV1-50A0A075B6I6 118 aa4.93□□□□□ -1.62
UPF3AP1-201ENST00000413731 A0A0U1RQV1 116 aa4.93□□□□□ -1.62
UPF3AP1-201ENST00000413731 TMEM238C9JI98 176 aa4.93□□□□□ -1.62
UPF3AP1-201ENST00000413731 M0R378 163 aa4.93□□□□□ -1.62
UPF3AP1-201ENST00000413731 ZNF861PO60384 105 aa4.93□□□□□ -1.62
UPF3AP1-201ENST00000413731 KRTAP1-4P0C5Y4 121 aa4.93□□□□□ -1.62
UPF3AP1-201ENST00000413731 SCGB1D4Q6XE38 83 aa4.93□□□□□ -1.62
UPF3AP1-201ENST00000413731 FAM19A1Q7Z5A9 133 aa4.93□□□□□ -1.62
UPF3AP1-201ENST00000413731 TMEM126AQ9H061 195 aa4.93□□□□□ -1.62
UPF3AP1-201ENST00000413731 HSBP1L1C9JCN9 74 aa4.92□□□□□ -1.62
UPF3AP1-201ENST00000413731 S100A12P80511 92 aa4.92□□□□□ -1.62
UPF3AP1-201ENST00000413731 PRLHP81277 87 aa4.92□□□□□ -1.62
UPF3AP1-201ENST00000413731 SMIM29Q86T20 159 aa4.92□□□□□ -1.62
UPF3AP1-201ENST00000413731 PCP2Q8IVA1 136 aa4.92□□□□□ -1.62
UPF3AP1-201ENST00000413731 SPANXB1Q9NS25 103 aaPredicted RBP4.92□□□□□ -1.62
UPF3AP1-201ENST00000413731 TIMM17BO60830 172 aa4.91□□□□□ -1.62
UPF3AP1-201ENST00000413731 ADAMTSL4-AS1Q5T5F5 129 aa4.91□□□□□ -1.62
UPF3AP1-201ENST00000413731 TRBV10-3A0A0K0K1G6 114 aa4.9□□□□□ -1.63
UPF3AP1-201ENST00000413731 JOSD1Q15040 202 aaPredicted RBP4.9□□□□□ -1.63
UPF3AP1-201ENST00000413731 S100A7L2Q5SY68 101 aa4.9□□□□□ -1.63
UPF3AP1-201ENST00000413731 LOC107984156A0A0G2JMH3 177 aa4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 TRBV10-2A0A0K0K1G8 114 aa4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 NDUFC2O95298 119 aa4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 DDTP30046 118 aa4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 RPL13AP40429 203 aaKnown RBP4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 PYY3Q5JQD4 70 aa4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 SOSTDC1Q6X4U4 206 aa4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 ARL17AQ8IVW1 177 aa4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 LINC00308Q8TCZ7 52 aa4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 LITAFQ99732 161 aa4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 HIGD2AQ9BW72 106 aa4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 SPANXCQ9NY87 97 aa4.89□□□□□ -1.63
UPF3AP1-201ENST00000413731 ETDCA0A1B0GVM5 59 aa4.88□□□□□ -1.63
UPF3AP1-201ENST00000413731 SPATA45Q537H7 98 aa4.88□□□□□ -1.63
UPF3AP1-201ENST00000413731 KRTAP13-1Q8IUC0 172 aa4.88□□□□□ -1.63
UPF3AP1-201ENST00000413731 MTURNQ8N3F0 131 aa4.88□□□□□ -1.63
UPF3AP1-201ENST00000413731 COPS9Q8WXC6 57 aa4.88□□□□□ -1.63
UPF3AP1-201ENST00000413731 VAMP8Q9BV40 100 aa4.88□□□□□ -1.63
UPF3AP1-201ENST00000413731 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
UPF3AP1-201ENST00000413731 TRAV23DV6A0A075B6W5 121 aa4.87□□□□□ -1.63
UPF3AP1-201ENST00000413731 KCNQ1DNQ9H478 68 aa4.87□□□□□ -1.63
UPF3AP1-201ENST00000413731 TSPAN13O95857 204 aa4.86□□□□□ -1.63
UPF3AP1-201ENST00000413731 NDUFV3P56181 108 aaKnown RBP4.86□□□□□ -1.63
UPF3AP1-201ENST00000413731 LINC00337Q8N6G1 96 aa4.86□□□□□ -1.63
UPF3AP1-201ENST00000413731 OR13C6PQ8NH95 151 aa4.86□□□□□ -1.63
UPF3AP1-201ENST00000413731 SPANXDQ9BXN6 97 aa4.86□□□□□ -1.63
UPF3AP1-201ENST00000413731 IGLV6-57P01721 117 aa4.85□□□□□ -1.63
UPF3AP1-201ENST00000413731 COX8AP10176 69 aa4.85□□□□□ -1.63
UPF3AP1-201ENST00000413731 CRYGAP11844 174 aa4.85□□□□□ -1.63
UPF3AP1-201ENST00000413731 IFITM1P13164 125 aa4.85□□□□□ -1.63
UPF3AP1-201ENST00000413731 SPRR1AP35321 89 aa4.85□□□□□ -1.63
UPF3AP1-201ENST00000413731 C14orf144Q96I85 54 aa4.85□□□□□ -1.63
UPF3AP1-201ENST00000413731 CBY1Q9Y3M2 126 aa4.85□□□□□ -1.63
UPF3AP1-201ENST00000413731 IGKV2D-30A0A075B6S6 120 aa4.84□□□□□ -1.63
UPF3AP1-201ENST00000413731 ZNF73O43830 326 aaPredicted RBP4.84□□□□□ -1.63
UPF3AP1-201ENST00000413731 Q6ZVH6 145 aa4.84□□□□□ -1.63
UPF3AP1-201ENST00000413731 ZNF706Q9Y5V0 76 aaPredicted RBP4.84□□□□□ -1.63
UPF3AP1-201ENST00000413731 A0A087X002 238 aa4.83□□□□□ -1.64
UPF3AP1-201ENST00000413731 FAM229BQ4G0N7 80 aa4.83□□□□□ -1.64
UPF3AP1-201ENST00000413731 Q6ZRX8 168 aa4.83□□□□□ -1.64
UPF3AP1-201ENST00000413731 MUSTN1Q8IVN3 82 aa4.83□□□□□ -1.64
UPF3AP1-201ENST00000413731 ANAPC11Q9NYG5 84 aa4.83□□□□□ -1.64
UPF3AP1-201ENST00000413731 MUC17Q685J3 4493 aa4.83□□□□□ -1.64
UPF3AP1-201ENST00000413731 LOC105371267A0A1B0GV96 52 aa4.82□□□□□ -1.64
UPF3AP1-201ENST00000413731 KRTAP4-16G5E9R7 235 aaPredicted RBP4.82□□□□□ -1.64
UPF3AP1-201ENST00000413731 HINT1P49773 126 aaPredicted RBP4.82□□□□□ -1.64
UPF3AP1-201ENST00000413731 SLC25A34Q6PIV7 304 aa4.82□□□□□ -1.64
UPF3AP1-201ENST00000413731 TYMSOSQ8TAI1 123 aa4.82□□□□□ -1.64
UPF3AP1-201ENST00000413731 SPRR4Q96PI1 79 aa4.82□□□□□ -1.64
UPF3AP1-201ENST00000413731 A6NDN8 102 aa4.81□□□□□ -1.64
UPF3AP1-201ENST00000413731 DLEU1O43261 78 aa4.81□□□□□ -1.64
UPF3AP1-201ENST00000413731 SMCR5Q8TEV8 140 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms