RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 SPAG11AQ6PDA7 123 aa9.12□□□□□ -0.95
MCF2L-211ENST00000413354 LINC00308Q8TCZ7 52 aa9.12□□□□□ -0.95
MCF2L-211ENST00000413354 LITAFQ99732 161 aa9.12□□□□□ -0.95
MCF2L-211ENST00000413354 SPANXCQ9NY87 97 aa9.12□□□□□ -0.95
MCF2L-211ENST00000413354 ZNF73O43830 326 aaPredicted RBP9.1□□□□□ -0.95
MCF2L-211ENST00000413354 EIF4EBP3O60516 100 aaPredicted RBP9.1□□□□□ -0.95
MCF2L-211ENST00000413354 LINC00483Q53H64 154 aa9.1□□□□□ -0.95
MCF2L-211ENST00000413354 S100A1P23297 94 aa9.09□□□□□ -0.95
MCF2L-211ENST00000413354 HINT1P49773 126 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-211ENST00000413354 C4orf48Q5BLP8 95 aa9.09□□□□□ -0.95
MCF2L-211ENST00000413354 PPDPFQ9H3Y8 114 aa9.09□□□□□ -0.95
MCF2L-211ENST00000413354 GAGE2AQ6NT46 116 aa9.08□□□□□ -0.96
MCF2L-211ENST00000413354 SCGB1D4Q6XE38 83 aa9.08□□□□□ -0.96
MCF2L-211ENST00000413354 COPS9Q8WXC6 57 aa9.08□□□□□ -0.96
MCF2L-211ENST00000413354 Q9BRP9 147 aa9.08□□□□□ -0.96
MCF2L-211ENST00000413354 OR13C6PQ8NH95 151 aa9.07□□□□□ -0.96
MCF2L-211ENST00000413354 SPANXDQ9BXN6 97 aa9.07□□□□□ -0.96
MCF2L-211ENST00000413354 TTTY13Q9BZ97 58 aa9.07□□□□□ -0.96
MCF2L-211ENST00000413354 ERC2-IT1O76042 136 aa9.06□□□□□ -0.96
MCF2L-211ENST00000413354 LINC00518Q8N0U6 118 aa9.06□□□□□ -0.96
MCF2L-211ENST00000413354 Q8NBF4 154 aa9.05□□□□□ -0.96
MCF2L-211ENST00000413354 RETNLBQ9BQ08 111 aa9.05□□□□□ -0.96
MCF2L-211ENST00000413354 RNF213Q63HN8 5207 aa9.05□□□□□ -0.96
MCF2L-211ENST00000413354 S100A2P29034 98 aa9.04□□□□□ -0.96
MCF2L-211ENST00000413354 SNRPEP62304 92 aaKnown RBP9.04□□□□□ -0.96
MCF2L-211ENST00000413354 ANKRD39Q53RE8 183 aa9.04□□□□□ -0.96
MCF2L-211ENST00000413354 ATOH7Q8N100 152 aa9.04□□□□□ -0.96
MCF2L-211ENST00000413354 C5orf52A6NGY3 159 aa9.03□□□□□ -0.96
MCF2L-211ENST00000413354 IFITM1P13164 125 aa9.03□□□□□ -0.96
MCF2L-211ENST00000413354 Q6ZVH6 145 aa9.03□□□□□ -0.96
MCF2L-211ENST00000413354 IGLV9-49A0A0B4J1Y8 123 aa9.01□□□□□ -0.97
MCF2L-211ENST00000413354 SPINK1P00995 79 aa9.01□□□□□ -0.97
MCF2L-211ENST00000413354 MOBPQ13875 183 aa9.01□□□□□ -0.97
MCF2L-211ENST00000413354 SSBP3-AS1Q7Z2R9 100 aa9.01□□□□□ -0.97
MCF2L-211ENST00000413354 HIST3H2BBQ8N257 126 aa9.01□□□□□ -0.97
MCF2L-211ENST00000413354 IGLV7-46A0A075B6I9 117 aa9□□□□□ -0.97
MCF2L-211ENST00000413354 DHRS4-AS1Q9P1J3 65 aa9□□□□□ -0.97
MCF2L-211ENST00000413354 S100A6P06703 90 aa8.99□□□□□ -0.97
MCF2L-211ENST00000413354 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
MCF2L-211ENST00000413354 FP248Q71RG6 208 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-211ENST00000413354 HIST1H2BLQ99880 126 aa8.99□□□□□ -0.97
MCF2L-211ENST00000413354 HSBP1L1C9JCN9 74 aa8.98□□□□□ -0.97
MCF2L-211ENST00000413354 PCP2Q8IVA1 136 aa8.98□□□□□ -0.97
MCF2L-211ENST00000413354 COX7BP24311 80 aa8.97□□□□□ -0.97
MCF2L-211ENST00000413354 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
MCF2L-211ENST00000413354 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
MCF2L-211ENST00000413354 C9orf153Q5TBE3 101 aa8.97□□□□□ -0.97
MCF2L-211ENST00000413354 SLC25A34Q6PIV7 304 aa8.97□□□□□ -0.97
MCF2L-211ENST00000413354 C6orf99Q4VX62 202 aa8.96□□□□□ -0.98
MCF2L-211ENST00000413354 ST20-AS1Q8NBB2 130 aa8.96□□□□□ -0.98
MCF2L-211ENST00000413354 CDIP1Q9H305 208 aa8.95□□□□□ -0.98
MCF2L-211ENST00000413354 TRBV7-6A0A0J9YX20 115 aa8.94□□□□□ -0.98
MCF2L-211ENST00000413354 MUSTN1Q8IVN3 82 aa8.94□□□□□ -0.98
MCF2L-211ENST00000413354 A6NDN8 102 aa8.93□□□□□ -0.98
MCF2L-211ENST00000413354 SPRR1BP22528 89 aa8.93□□□□□ -0.98
MCF2L-211ENST00000413354 TRAV13-2A0A0B4J235 113 aa8.92□□□□□ -0.98
MCF2L-211ENST00000413354 A0A1B0GWB2 263 aa8.92□□□□□ -0.98
MCF2L-211ENST00000413354 LAMTOR3Q9UHA4 124 aa8.91□□□□□ -0.98
MCF2L-211ENST00000413354 A4D1N5 150 aa8.89□□□□□ -0.99
MCF2L-211ENST00000413354 SLC25A20O43772 301 aa8.89□□□□□ -0.99
MCF2L-211ENST00000413354 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
MCF2L-211ENST00000413354 TAL2Q16559 108 aa8.88□□□□□ -0.99
MCF2L-211ENST00000413354 Q8N377 158 aa8.88□□□□□ -0.99
MCF2L-211ENST00000413354 SCGB1D1O95968 90 aa8.87□□□□□ -0.99
MCF2L-211ENST00000413354 NHP2Q9NX24 153 aaKnown RBP8.87□□□□□ -0.99
MCF2L-211ENST00000413354 TEX49A0A1B0GTD5 131 aa8.86□□□□□ -0.99
MCF2L-211ENST00000413354 DEFB105AQ8NG35 78 aa8.84□□□□□ -0.99
MCF2L-211ENST00000413354 SMIM11BQ8TCY0 68 aa8.84□□□□□ -0.99
MCF2L-211ENST00000413354 LIMD2Q9BT23 127 aa8.84□□□□□ -0.99
MCF2L-211ENST00000413354 VAMP3Q15836 100 aa8.83□□□□□ -1
MCF2L-211ENST00000413354 KRTAP13-3Q3SY46 172 aa8.83□□□□□ -1
MCF2L-211ENST00000413354 Q1RN00 199 aa8.82□□□□□ -1
MCF2L-211ENST00000413354 IGLV5-48A0A075B6I7 105 aa8.81□□□□□ -1
MCF2L-211ENST00000413354 COX8AP10176 69 aa8.8□□□□□ -1
MCF2L-211ENST00000413354 CD164Q04900 197 aa8.8□□□□□ -1
MCF2L-211ENST00000413354 PRO1933Q9H354 126 aa8.8□□□□□ -1
MCF2L-211ENST00000413354 MUC17Q685J3 4493 aa8.8□□□□□ -1
MCF2L-211ENST00000413354 HIST1H4GQ99525 98 aa8.79□□□□□ -1
MCF2L-211ENST00000413354 DLEU1O43261 78 aa8.78□□□□□ -1
MCF2L-211ENST00000413354 LINC01547P58512 204 aaPredicted RBP8.78□□□□□ -1
MCF2L-211ENST00000413354 HRCT1Q6UXD1 115 aa8.78□□□□□ -1
MCF2L-211ENST00000413354 MUC2Q02817 5179 aa8.78□□□□□ -1
MCF2L-211ENST00000413354 H7C2G1 150 aa8.76□□□□□ -1.01
MCF2L-211ENST00000413354 SMIM29Q86T20 159 aa8.76□□□□□ -1.01
MCF2L-211ENST00000413354 LINC00575Q6W349 94 aa8.75□□□□□ -1.01
MCF2L-211ENST00000413354 hADV29S1A0JD25 119 aa8.73□□□□□ -1.01
MCF2L-211ENST00000413354 F8WEM9 126 aa8.73□□□□□ -1.01
MCF2L-211ENST00000413354 SEC61BP60468 96 aaKnown RBP8.73□□□□□ -1.01
MCF2L-211ENST00000413354 BVES-AS1Q5T3Y7 98 aa8.73□□□□□ -1.01
MCF2L-211ENST00000413354 C12orf57Q99622 126 aa8.73□□□□□ -1.01
MCF2L-211ENST00000413354 ASB16-AS1Q495Z4 193 aa8.72□□□□□ -1.01
MCF2L-211ENST00000413354 SPATA45Q537H7 98 aa8.72□□□□□ -1.01
MCF2L-211ENST00000413354 VAMP8Q9BV40 100 aa8.72□□□□□ -1.01
MCF2L-211ENST00000413354 PAM16Q9Y3D7 125 aa8.72□□□□□ -1.01
MCF2L-211ENST00000413354 Q5XG85 94 aa8.71□□□□□ -1.02
MCF2L-211ENST00000413354 Q6ZQY7 126 aa8.71□□□□□ -1.02
MCF2L-211ENST00000413354 C14orf144Q96I85 54 aa8.71□□□□□ -1.02
MCF2L-211ENST00000413354 HIGD1BQ9P298 99 aa8.71□□□□□ -1.02
MCF2L-211ENST00000413354 XP32Q5T750 250 aa8.68□□□□□ -1.02
MCF2L-211ENST00000413354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms