RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 GAGE10A6NGK3 116 aa4.21□□□□□ -1.74
VPS41-204ENST00000413141 COX6CP09669 75 aa4.21□□□□□ -1.74
VPS41-204ENST00000413141 MRPL55Q7Z7F7 128 aaKnown RBP4.21□□□□□ -1.74
VPS41-204ENST00000413141 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
VPS41-204ENST00000413141 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.74
VPS41-204ENST00000413141 C22orf24Q9Y442 160 aa4.21□□□□□ -1.74
VPS41-204ENST00000413141 DNAH5Q8TE73 4624 aa4.21□□□□□ -1.74
VPS41-204ENST00000413141 TRBV20-1A0A075B6N2 111 aa4.2□□□□□ -1.74
VPS41-204ENST00000413141 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
VPS41-204ENST00000413141 TCL1BO95988 128 aa4.2□□□□□ -1.74
VPS41-204ENST00000413141 SCGB1C2P0DMR2 95 aa4.2□□□□□ -1.74
VPS41-204ENST00000413141 C6orf99Q4VX62 202 aa4.2□□□□□ -1.74
VPS41-204ENST00000413141 GTF2H5Q6ZYL4 71 aa4.2□□□□□ -1.74
VPS41-204ENST00000413141 CLEC2BQ92478 149 aa4.2□□□□□ -1.74
VPS41-204ENST00000413141 LINC00167Q96N53 147 aa4.2□□□□□ -1.74
VPS41-204ENST00000413141 CBY1Q9Y3M2 126 aa4.2□□□□□ -1.74
VPS41-204ENST00000413141 PKD1P98161 4303 aa4.19□□□□□ -1.74
VPS41-204ENST00000413141 IGLV1-50A0A075B6I6 118 aa4.19□□□□□ -1.74
VPS41-204ENST00000413141 RPL37AP8A6NKH3 93 aa4.19□□□□□ -1.74
VPS41-204ENST00000413141 EPM2AB3EWF7 344 aa4.19□□□□□ -1.74
VPS41-204ENST00000413141 LST1O00453 97 aa4.19□□□□□ -1.74
VPS41-204ENST00000413141 PRYO14603 147 aa4.19□□□□□ -1.74
VPS41-204ENST00000413141 ZNF73O43830 326 aaPredicted RBP4.19□□□□□ -1.74
VPS41-204ENST00000413141 DIRC1Q969H9 104 aa4.19□□□□□ -1.74
VPS41-204ENST00000413141 FAM218AQ96MZ4 157 aa4.19□□□□□ -1.74
VPS41-204ENST00000413141 KCNQ1DNQ9H478 68 aa4.19□□□□□ -1.74
VPS41-204ENST00000413141 A0A087WYN8 130 aa4.18□□□□□ -1.74
VPS41-204ENST00000413141 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
VPS41-204ENST00000413141 H0YGX0 51 aa4.18□□□□□ -1.74
VPS41-204ENST00000413141 H3BMG7 143 aa4.18□□□□□ -1.74
VPS41-204ENST00000413141 UBE2V1Q13404 147 aa4.18□□□□□ -1.74
VPS41-204ENST00000413141 ATXN8Q156A1 80 aa4.18□□□□□ -1.74
VPS41-204ENST00000413141 PHF5AQ7RTV0 110 aaKnown RBP4.18□□□□□ -1.74
VPS41-204ENST00000413141 RYR3Q15413 4870 aa4.17□□□□□ -1.74
VPS41-204ENST00000413141 TRBV7-6A0A0J9YX20 115 aa4.17□□□□□ -1.74
VPS41-204ENST00000413141 SPRR1AP35321 89 aa4.17□□□□□ -1.74
VPS41-204ENST00000413141 ELOF1P60002 83 aaKnown RBP4.17□□□□□ -1.74
VPS41-204ENST00000413141 KRTAP10-1P60331 282 aa4.17□□□□□ -1.74
VPS41-204ENST00000413141 Q6ZSA8 131 aa4.17□□□□□ -1.74
VPS41-204ENST00000413141 PLAC8Q9NZF1 115 aa4.17□□□□□ -1.74
VPS41-204ENST00000413141 KRTAP4-16G5E9R7 235 aaPredicted RBP4.16□□□□□ -1.74
VPS41-204ENST00000413141 TRACP01848 142 aa4.16□□□□□ -1.74
VPS41-204ENST00000413141 COX7BP24311 80 aa4.16□□□□□ -1.74
VPS41-204ENST00000413141 UBE2BP63146 152 aa4.16□□□□□ -1.74
VPS41-204ENST00000413141 REG3GQ6UW15 175 aa4.16□□□□□ -1.74
VPS41-204ENST00000413141 KRTAP11-1Q8IUC1 163 aa4.16□□□□□ -1.74
VPS41-204ENST00000413141 DPH3Q96FX2 82 aa4.16□□□□□ -1.74
VPS41-204ENST00000413141 FAM30AQ9NZY2 134 aa4.16□□□□□ -1.74
VPS41-204ENST00000413141 A0A1B0GX51 115 aa4.15□□□□□ -1.75
VPS41-204ENST00000413141 LINC00575Q6W349 94 aa4.15□□□□□ -1.75
VPS41-204ENST00000413141 MTURNQ8N3F0 131 aa4.15□□□□□ -1.75
VPS41-204ENST00000413141 PRO0461Q9UI25 63 aa4.15□□□□□ -1.75
VPS41-204ENST00000413141 DNAH8Q96JB1 4490 aa4.14□□□□□ -1.75
VPS41-204ENST00000413141 ETDCA0A1B0GVM5 59 aa4.14□□□□□ -1.75
VPS41-204ENST00000413141 B5MCH6 92 aa4.14□□□□□ -1.75
VPS41-204ENST00000413141 C9JAW5 83 aa4.14□□□□□ -1.75
VPS41-204ENST00000413141 DNAL4O96015 105 aa4.14□□□□□ -1.75
VPS41-204ENST00000413141 Q6ZRX8 168 aa4.14□□□□□ -1.75
VPS41-204ENST00000413141 SCXQ7RTU7 201 aa4.14□□□□□ -1.75
VPS41-204ENST00000413141 KRTAP19-1Q8IUB9 90 aa4.14□□□□□ -1.75
VPS41-204ENST00000413141 CIRBP-AS1Q8TBR5 109 aa4.14□□□□□ -1.75
VPS41-204ENST00000413141 hADV29S1A0JD25 119 aa4.13□□□□□ -1.75
VPS41-204ENST00000413141 F8W1H4 67 aa4.13□□□□□ -1.75
VPS41-204ENST00000413141 SLC25A20O43772 301 aa4.13□□□□□ -1.75
VPS41-204ENST00000413141 PKHD1P08F94 4074 aa4.13□□□□□ -1.75
VPS41-204ENST00000413141 H3BT86 120 aa4.12□□□□□ -1.75
VPS41-204ENST00000413141 BCE1O60756 84 aa4.12□□□□□ -1.75
VPS41-204ENST00000413141 HAMPP81172 84 aa4.12□□□□□ -1.75
VPS41-204ENST00000413141 PRLHP81277 87 aa4.12□□□□□ -1.75
VPS41-204ENST00000413141 FAM19A1Q7Z5A9 133 aa4.12□□□□□ -1.75
VPS41-204ENST00000413141 Q9BRP9 147 aa4.12□□□□□ -1.75
VPS41-204ENST00000413141 DHRS4-AS1Q9P1J3 65 aa4.12□□□□□ -1.75
VPS41-204ENST00000413141 DYNC1H1Q14204 4646 aaKnown RBP4.11□□□□□ -1.75
VPS41-204ENST00000413141 H0Y9J4 135 aa4.11□□□□□ -1.75
VPS41-204ENST00000413141 SNCGO76070 127 aa4.11□□□□□ -1.75
VPS41-204ENST00000413141 INAFM2P0DMQ5 153 aa4.11□□□□□ -1.75
VPS41-204ENST00000413141 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.11□□□□□ -1.75
VPS41-204ENST00000413141 Q6ZQY7 126 aa4.11□□□□□ -1.75
VPS41-204ENST00000413141 ANKRD29Q8N6D5 301 aa4.11□□□□□ -1.75
VPS41-204ENST00000413141 SMCR5Q8TEV8 140 aa4.11□□□□□ -1.75
VPS41-204ENST00000413141 LINC01600Q96MT4 127 aa4.11□□□□□ -1.75
VPS41-204ENST00000413141 ORMDL1Q9P0S3 153 aa4.11□□□□□ -1.75
VPS41-204ENST00000413141 PSORS1C2Q9UIG4 136 aa4.11□□□□□ -1.75
VPS41-204ENST00000413141 LRP1BQ9NZR2 4599 aa4.11□□□□□ -1.75
VPS41-204ENST00000413141 UBE2AP49459 152 aa4.1□□□□□ -1.75
VPS41-204ENST00000413141 KRTAP13-1Q8IUC0 172 aa4.1□□□□□ -1.75
VPS41-204ENST00000413141 H3BS24 57 aa4.09□□□□□ -1.75
VPS41-204ENST00000413141 ERC2-IT1O76042 136 aa4.09□□□□□ -1.75
VPS41-204ENST00000413141 BAALC-AS2P0C853 105 aa4.09□□□□□ -1.75
VPS41-204ENST00000413141 OCIAD2Q56VL3 154 aa4.09□□□□□ -1.75
VPS41-204ENST00000413141 C1orf137Q5JT78 98 aa4.09□□□□□ -1.75
VPS41-204ENST00000413141 ETDBQ3ZM63 59 aa4.08□□□□□ -1.76
VPS41-204ENST00000413141 TEN1Q86WV5 123 aa4.08□□□□□ -1.76
VPS41-204ENST00000413141 HIGD2AQ9BW72 106 aa4.08□□□□□ -1.76
VPS41-204ENST00000413141 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
VPS41-204ENST00000413141 IGLV5-48A0A075B6I7 105 aa4.07□□□□□ -1.76
VPS41-204ENST00000413141 H3BQ85 93 aa4.07□□□□□ -1.76
VPS41-204ENST00000413141 TMEM256-PLSCR3K7ERE1 68 aa4.07□□□□□ -1.76
VPS41-204ENST00000413141 XGP55808 180 aa4.07□□□□□ -1.76
VPS41-204ENST00000413141 LINC01547P58512 204 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms