RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 ANKRD36A6QL64 1941 aa-0.4□□□□□ -2.47
CLHC1-205ENST00000411884 NBEAL1Q6ZS30 2694 aa-0.41□□□□□ -2.47
CLHC1-205ENST00000411884 ANKRD26Q9UPS8 1709 aa-0.41□□□□□ -2.47
CLHC1-205ENST00000411884 C3orf79P0CE67 100 aa-0.41□□□□□ -2.48
CLHC1-205ENST00000411884 PDZD2O15018 2839 aa-0.41□□□□□ -2.48
CLHC1-205ENST00000411884 MYO3AQ8NEV4 1616 aa-0.42□□□□□ -2.48
CLHC1-205ENST00000411884 CICQ96RK0 1608 aaPredicted RBP-0.42□□□□□ -2.48
CLHC1-205ENST00000411884 ALKQ9UM73 1620 aa-0.42□□□□□ -2.48
CLHC1-205ENST00000411884 KANTRA0A1W2PQU2 76 aa-0.42□□□□□ -2.48
CLHC1-205ENST00000411884 REV3LO60673 3130 aa-0.42□□□□□ -2.48
CLHC1-205ENST00000411884 UBR3Q6ZT12 1888 aa-0.42□□□□□ -2.48
CLHC1-205ENST00000411884 PTPN23Q9H3S7 1636 aa-0.42□□□□□ -2.48
CLHC1-205ENST00000411884 BCORQ6W2J9 1755 aa-0.42□□□□□ -2.48
CLHC1-205ENST00000411884 KIF20BQ96Q89 1820 aa-0.43□□□□□ -2.48
CLHC1-205ENST00000411884 MUC12Q9UKN1 5478 aa-0.43□□□□□ -2.48
CLHC1-205ENST00000411884 ADAMTS12P58397 1594 aa-0.43□□□□□ -2.48
CLHC1-205ENST00000411884 SPRR2EP22531 72 aa-0.43□□□□□ -2.48
CLHC1-205ENST00000411884 PRO3102Q9H379 93 aa-0.43□□□□□ -2.48
CLHC1-205ENST00000411884 COL14A1Q05707 1796 aaKnown RBP-0.43□□□□□ -2.48
CLHC1-205ENST00000411884 PREX1Q8TCU6 1659 aa-0.43□□□□□ -2.48
CLHC1-205ENST00000411884 ABCC3O15438 1527 aa-0.43□□□□□ -2.48
CLHC1-205ENST00000411884 TTC37Q6PGP7 1564 aa-0.44□□□□□ -2.48
CLHC1-205ENST00000411884 AKAP12Q02952 1782 aa-0.44□□□□□ -2.48
CLHC1-205ENST00000411884 PKD1L3Q7Z443 1732 aa-0.44□□□□□ -2.48
CLHC1-205ENST00000411884 MYH4Q9Y623 1939 aa-0.44□□□□□ -2.48
CLHC1-205ENST00000411884 RGPD8O14715 1765 aaPredicted RBP-0.45□□□□□ -2.48
CLHC1-205ENST00000411884 RGPD5Q99666 1765 aa-0.45□□□□□ -2.48
CLHC1-205ENST00000411884 SETD2Q9BYW2 2564 aaPredicted RBP-0.45□□□□□ -2.48
CLHC1-205ENST00000411884 SVEP1Q4LDE5 3571 aa-0.45□□□□□ -2.48
CLHC1-205ENST00000411884 PDE4DIPQ5VU43 2346 aa-0.45□□□□□ -2.48
CLHC1-205ENST00000411884 IFI27P40305 119 aaPredicted RBP-0.45□□□□□ -2.48
CLHC1-205ENST00000411884 GNG2P59768 71 aa-0.45□□□□□ -2.48
CLHC1-205ENST00000411884 TDRG1Q3Y452 100 aa-0.45□□□□□ -2.48
CLHC1-205ENST00000411884 RGPD2P0DJD1 1756 aa-0.45□□□□□ -2.48
CLHC1-205ENST00000411884 MAP1AP78559 2803 aaPredicted RBP-0.46□□□□□ -2.48
CLHC1-205ENST00000411884 UACAQ9BZF9 1416 aa-0.46□□□□□ -2.48
CLHC1-205ENST00000411884 NCOA2Q15596 1464 aa-0.46□□□□□ -2.48
CLHC1-205ENST00000411884 QSER1Q2KHR3 1735 aa-0.46□□□□□ -2.48
CLHC1-205ENST00000411884 URB2Q14146 1524 aaKnown RBP-0.46□□□□□ -2.48
CLHC1-205ENST00000411884 UMAD1C9J7I0 102 aa-0.46□□□□□ -2.48
CLHC1-205ENST00000411884 HECTD1Q9ULT8 2610 aa-0.46□□□□□ -2.48
CLHC1-205ENST00000411884 CREBBPQ92793 2442 aa-0.46□□□□□ -2.48
CLHC1-205ENST00000411884 FLGP20930 4061 aaPredicted RBP-0.46□□□□□ -2.48
CLHC1-205ENST00000411884 LINC00158P58513 81 aa-0.47□□□□□ -2.48
CLHC1-205ENST00000411884 USP32Q8NFA0 1604 aa-0.47□□□□□ -2.48
CLHC1-205ENST00000411884 NBASA2RRP1 2371 aa-0.48□□□□□ -2.49
CLHC1-205ENST00000411884 SONP18583 2426 aaKnown RBP-0.48□□□□□ -2.49
CLHC1-205ENST00000411884 KRTAP19-8Q3LI54 63 aa-0.48□□□□□ -2.49
CLHC1-205ENST00000411884 RGPD1P0DJD0 1748 aa-0.48□□□□□ -2.49
CLHC1-205ENST00000411884 ADIRFQ15847 76 aa-0.49□□□□□ -2.49
CLHC1-205ENST00000411884 SPTBN4Q9H254 2564 aa-0.49□□□□□ -2.49
CLHC1-205ENST00000411884 TRANK1O15050 2925 aa-0.49□□□□□ -2.49
CLHC1-205ENST00000411884 AKAP13Q12802 2813 aa-0.5□□□□□ -2.49
CLHC1-205ENST00000411884 IFI6P09912 130 aa-0.5□□□□□ -2.49
CLHC1-205ENST00000411884 ATP5EP2Q5VTU8 51 aa-0.5□□□□□ -2.49
CLHC1-205ENST00000411884 S100A13Q99584 98 aa-0.5□□□□□ -2.49
CLHC1-205ENST00000411884 ST20Q9HBF5 79 aa-0.5□□□□□ -2.49
CLHC1-205ENST00000411884 SPG11Q96JI7 2443 aa-0.5□□□□□ -2.49
CLHC1-205ENST00000411884 KMT2CQ8NEZ4 4911 aaKnown RBP-0.51□□□□□ -2.49
CLHC1-205ENST00000411884 C9orf92A6NGG3 77 aa-0.51□□□□□ -2.49
CLHC1-205ENST00000411884 H3BNG1 76 aa-0.51□□□□□ -2.49
CLHC1-205ENST00000411884 HMGA1P17096 107 aaKnown RBP-0.51□□□□□ -2.49
CLHC1-205ENST00000411884 KIF14Q15058 1648 aa-0.51□□□□□ -2.49
CLHC1-205ENST00000411884 EPG5Q9HCE0 2579 aa-0.51□□□□□ -2.49
CLHC1-205ENST00000411884 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.51□□□□□ -2.49
CLHC1-205ENST00000411884 TGP01266 2768 aa-0.51□□□□□ -2.49
CLHC1-205ENST00000411884 PKD1P98161 4303 aa-0.52□□□□□ -2.49
CLHC1-205ENST00000411884 UBR1Q8IWV7 1749 aa-0.52□□□□□ -2.49
CLHC1-205ENST00000411884 A0A087WXM4 84 aa-0.52□□□□□ -2.49
CLHC1-205ENST00000411884 LCE6AA0A183 80 aa-0.52□□□□□ -2.49
CLHC1-205ENST00000411884 NDUFA4O00483 81 aa-0.52□□□□□ -2.49
CLHC1-205ENST00000411884 NF1P21359 2839 aa-0.52□□□□□ -2.49
CLHC1-205ENST00000411884 DNAH9Q9NYC9 4486 aa-0.52□□□□□ -2.49
CLHC1-205ENST00000411884 RGPD4Q7Z3J3 1758 aa-0.52□□□□□ -2.49
CLHC1-205ENST00000411884 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.53□□□□□ -2.49
CLHC1-205ENST00000411884 NWD1Q149M9 1564 aa-0.53□□□□□ -2.49
CLHC1-205ENST00000411884 CCDC88BA6NC98 1476 aa-0.53□□□□□ -2.49
CLHC1-205ENST00000411884 NREPQ16612 68 aa-0.53□□□□□ -2.49
CLHC1-205ENST00000411884 DEFB121Q5J5C9 76 aa-0.53□□□□□ -2.49
CLHC1-205ENST00000411884 HERC1Q15751 4861 aa-0.54□□□□□ -2.5
CLHC1-205ENST00000411884 MT1AP04731 61 aa-0.54□□□□□ -2.5
CLHC1-205ENST00000411884 DEFA5Q01523 94 aa-0.54□□□□□ -2.5
CLHC1-205ENST00000411884 TMEM131LA2VDJ0 1609 aa-0.54□□□□□ -2.5
CLHC1-205ENST00000411884 MAP3K4Q9Y6R4 1608 aa-0.54□□□□□ -2.5
CLHC1-205ENST00000411884 MXRA5Q9NR99 2828 aa-0.54□□□□□ -2.5
CLHC1-205ENST00000411884 MAGI3Q5TCQ9 1506 aa-0.54□□□□□ -2.5
CLHC1-205ENST00000411884 LAMA5O15230 3695 aa-0.54□□□□□ -2.5
CLHC1-205ENST00000411884 RGPD3A6NKT7 1758 aaPredicted RBP-0.55□□□□□ -2.5
CLHC1-205ENST00000411884 SUPT6HQ7KZ85 1726 aaKnown RBP-0.55□□□□□ -2.5
CLHC1-205ENST00000411884 PCLOQ9Y6V0 5065 aa-0.55□□□□□ -2.5
CLHC1-205ENST00000411884 LYNX1G3V0Z9 82 aa-0.55□□□□□ -2.5
CLHC1-205ENST00000411884 H0YAA0 97 aa-0.55□□□□□ -2.5
CLHC1-205ENST00000411884 SPRR2FQ96RM1 72 aa-0.55□□□□□ -2.5
CLHC1-205ENST00000411884 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.55□□□□□ -2.5
CLHC1-205ENST00000411884 FAT1Q14517 4588 aa-0.55□□□□□ -2.5
CLHC1-205ENST00000411884 PLXNC1O60486 1568 aa-0.56□□□□□ -2.5
CLHC1-205ENST00000411884 PRRC2CQ9Y520 2896 aaKnown RBP-0.56□□□□□ -2.5
CLHC1-205ENST00000411884 H3BUT2 72 aa-0.56□□□□□ -2.5
CLHC1-205ENST00000411884 SMIM13P0DJ93 91 aa-0.56□□□□□ -2.5
CLHC1-205ENST00000411884 TNRC18O15417 2968 aaPredicted RBP-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms