RNA–Protein interactions for RNA: ENST00000411788.5

SEMA3C-202, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-202ENST00000411788 A0A1W2PPR1 153 aa2.54□□□□□ -2
SEMA3C-202ENST00000411788 RPL37AP61513 92 aaKnown RBP2.54□□□□□ -2
SEMA3C-202ENST00000411788 SSBP3-AS1Q7Z2R9 100 aa2.54□□□□□ -2
SEMA3C-202ENST00000411788 ASCC3Q8N3C0 2202 aaKnown RBP2.53□□□□□ -2
SEMA3C-202ENST00000411788 FAM168BA1KXE4 195 aa2.53□□□□□ -2
SEMA3C-202ENST00000411788 DEFB1P60022 68 aa2.53□□□□□ -2
SEMA3C-202ENST00000411788 C5orf56Q8N8D9 126 aa2.53□□□□□ -2
SEMA3C-202ENST00000411788 BRWD1Q9NSI6 2320 aa2.52□□□□□ -2.01
SEMA3C-202ENST00000411788 C14orf177Q52M58 125 aa2.52□□□□□ -2.01
SEMA3C-202ENST00000411788 A0A0G2JQZ4 141 aa2.51□□□□□ -2.01
SEMA3C-202ENST00000411788 A0A1W2PNN7 141 aa2.51□□□□□ -2.01
SEMA3C-202ENST00000411788 MAPK1IP1LQ8NDC0 245 aa2.51□□□□□ -2.01
SEMA3C-202ENST00000411788 DEFB105AQ8NG35 78 aa2.51□□□□□ -2.01
SEMA3C-202ENST00000411788 C16orf74Q96GX8 76 aa2.51□□□□□ -2.01
SEMA3C-202ENST00000411788 ALMS1Q8TCU4 4167 aa2.51□□□□□ -2.01
SEMA3C-202ENST00000411788 NOTCH3Q9UM47 2321 aa2.51□□□□□ -2.01
SEMA3C-202ENST00000411788 DEFB133Q30KQ1 61 aa2.5□□□□□ -2.01
SEMA3C-202ENST00000411788 Q6ZRX8 168 aa2.5□□□□□ -2.01
SEMA3C-202ENST00000411788 ASXL3Q9C0F0 2248 aa2.49□□□□□ -2.01
SEMA3C-202ENST00000411788 HTN1P15515 57 aa2.49□□□□□ -2.01
SEMA3C-202ENST00000411788 DEFB103AP81534 67 aa2.49□□□□□ -2.01
SEMA3C-202ENST00000411788 CLPSL2Q6UWE3 100 aa2.49□□□□□ -2.01
SEMA3C-202ENST00000411788 ABCA4P78363 2273 aa2.48□□□□□ -2.01
SEMA3C-202ENST00000411788 DEFB109BQ30KR1 87 aa2.48□□□□□ -2.01
SEMA3C-202ENST00000411788 IGFL1Q6UW32 110 aa2.48□□□□□ -2.01
SEMA3C-202ENST00000411788 UNQ6190/PRO20217Q6UXQ8 127 aa2.48□□□□□ -2.01
SEMA3C-202ENST00000411788 MRPL34Q9BQ48 92 aaKnown RBP2.48□□□□□ -2.01
SEMA3C-202ENST00000411788 PSORS1C2Q9UIG4 136 aa2.48□□□□□ -2.01
SEMA3C-202ENST00000411788 DOPEY2Q9Y3R5 2298 aa2.48□□□□□ -2.01
SEMA3C-202ENST00000411788 KNL1Q8NG31 2342 aa2.47□□□□□ -2.01
SEMA3C-202ENST00000411788 PLCE1Q9P212 2302 aa2.47□□□□□ -2.01
SEMA3C-202ENST00000411788 G3V318 75 aa2.47□□□□□ -2.01
SEMA3C-202ENST00000411788 SPRR1AP35321 89 aa2.47□□□□□ -2.01
SEMA3C-202ENST00000411788 KRTAP7-1Q8IUC3 87 aa2.47□□□□□ -2.01
SEMA3C-202ENST00000411788 COX6B2Q6YFQ2 88 aa2.46□□□□□ -2.02
SEMA3C-202ENST00000411788 PRO2289Q9P1D8 64 aa2.46□□□□□ -2.02
SEMA3C-202ENST00000411788 CRIPTQ9P021 101 aa2.45□□□□□ -2.02
SEMA3C-202ENST00000411788 ICE1Q9Y2F5 2266 aa2.45□□□□□ -2.02
SEMA3C-202ENST00000411788 H0YAA0 97 aa2.44□□□□□ -2.02
SEMA3C-202ENST00000411788 H3BUX3 64 aa2.44□□□□□ -2.02
SEMA3C-202ENST00000411788 KRTAP10-12P60413 245 aa2.44□□□□□ -2.02
SEMA3C-202ENST00000411788 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
SEMA3C-202ENST00000411788 TYMSOSQ8TAI1 123 aa2.42□□□□□ -2.02
SEMA3C-202ENST00000411788 ABCA1O95477 2261 aa2.42□□□□□ -2.02
SEMA3C-202ENST00000411788 TECTAO75443 2155 aa2.42□□□□□ -2.02
SEMA3C-202ENST00000411788 SPRR1BP22528 89 aa2.41□□□□□ -2.02
SEMA3C-202ENST00000411788 KRTAP13-3Q3SY46 172 aa2.41□□□□□ -2.02
SEMA3C-202ENST00000411788 Q6ZSA8 131 aa2.41□□□□□ -2.02
SEMA3C-202ENST00000411788 LY6EQ16553 131 aa2.4□□□□□ -2.03
SEMA3C-202ENST00000411788 TPRXLQ17RH7 258 aa2.4□□□□□ -2.03
SEMA3C-202ENST00000411788 H1FX-AS1Q4G0G2 97 aa2.4□□□□□ -2.03
SEMA3C-202ENST00000411788 GIG44P09565 113 aaPredicted RBP2.39□□□□□ -2.03
SEMA3C-202ENST00000411788 PLAC4Q8WY50 150 aa2.39□□□□□ -2.03
SEMA3C-202ENST00000411788 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
SEMA3C-202ENST00000411788 NOP10Q9NPE3 64 aaKnown RBP2.39□□□□□ -2.03
SEMA3C-202ENST00000411788 WDR87Q6ZQQ6 2873 aa2.38□□□□□ -2.03
SEMA3C-202ENST00000411788 COL6A3P12111 3177 aa2.38□□□□□ -2.03
SEMA3C-202ENST00000411788 EP400Q96L91 3159 aa2.38□□□□□ -2.03
SEMA3C-202ENST00000411788 PRO0255Q9UI72 69 aa2.38□□□□□ -2.03
SEMA3C-202ENST00000411788 PCNTO95613 3336 aa2.38□□□□□ -2.03
SEMA3C-202ENST00000411788 DEFB119Q8N690 84 aa2.37□□□□□ -2.03
SEMA3C-202ENST00000411788 SRCAPQ6ZRS2 3230 aa2.36□□□□□ -2.03
SEMA3C-202ENST00000411788 RPL37P61927 97 aaKnown RBP2.36□□□□□ -2.03
SEMA3C-202ENST00000411788 AHCTF1Q8WYP5 2266 aa2.36□□□□□ -2.03
SEMA3C-202ENST00000411788 WNK2Q9Y3S1 2297 aa2.36□□□□□ -2.03
SEMA3C-202ENST00000411788 CACNA1GO43497 2377 aa2.36□□□□□ -2.03
SEMA3C-202ENST00000411788 CUL9Q8IWT3 2517 aa2.35□□□□□ -2.03
SEMA3C-202ENST00000411788 INE1O15225 51 aa2.35□□□□□ -2.03
SEMA3C-202ENST00000411788 LELP1Q5T871 98 aa2.35□□□□□ -2.03
SEMA3C-202ENST00000411788 R4GN34 69 aa2.35□□□□□ -2.03
SEMA3C-202ENST00000411788 DNAH12Q6ZR08 3092 aa2.35□□□□□ -2.03
SEMA3C-202ENST00000411788 SPTBN1Q01082 2364 aaKnown RBP2.35□□□□□ -2.03
SEMA3C-202ENST00000411788 CEP350Q5VT06 3117 aa2.35□□□□□ -2.03
SEMA3C-202ENST00000411788 LYNX1P0DP58 116 aa2.34□□□□□ -2.03
SEMA3C-202ENST00000411788 DEFB130BP0DP73 79 aa2.34□□□□□ -2.03
SEMA3C-202ENST00000411788 DEFB130AP0DP74 79 aa2.34□□□□□ -2.03
SEMA3C-202ENST00000411788 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
SEMA3C-202ENST00000411788 U3KQA8 63 aa2.34□□□□□ -2.03
SEMA3C-202ENST00000411788 BRD3OSQ6XYD6 125 aa2.33□□□□□ -2.04
SEMA3C-202ENST00000411788 WNK1Q9H4A3 2382 aa2.33□□□□□ -2.04
SEMA3C-202ENST00000411788 SPACA4Q8TDM5 124 aa2.32□□□□□ -2.04
SEMA3C-202ENST00000411788 KRTAP10-3P60369 221 aa2.31□□□□□ -2.04
SEMA3C-202ENST00000411788 DEFB136Q30KP8 78 aa2.31□□□□□ -2.04
SEMA3C-202ENST00000411788 C10orf99Q6UWK7 81 aa2.31□□□□□ -2.04
SEMA3C-202ENST00000411788 MGAQ8IWI9 3026 aa2.3□□□□□ -2.04
SEMA3C-202ENST00000411788 A0A1B0GVY2 172 aa2.3□□□□□ -2.04
SEMA3C-202ENST00000411788 PRLHP81277 87 aa2.3□□□□□ -2.04
SEMA3C-202ENST00000411788 Q6ZRN7 208 aaPredicted RBP2.3□□□□□ -2.04
SEMA3C-202ENST00000411788 UBE2DNLQ8IWF7 75 aa2.3□□□□□ -2.04
SEMA3C-202ENST00000411788 CNOT1A5YKK6 2376 aaKnown RBP2.3□□□□□ -2.04
SEMA3C-202ENST00000411788 GOLGB1Q14789 3259 aaKnown RBP2.29□□□□□ -2.04
SEMA3C-202ENST00000411788 K7EIL1 84 aa2.29□□□□□ -2.04
SEMA3C-202ENST00000411788 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
SEMA3C-202ENST00000411788 CENPFP49454 3210 aa2.29□□□□□ -2.04
SEMA3C-202ENST00000411788 ATRXP46100 2492 aa2.28□□□□□ -2.04
SEMA3C-202ENST00000411788 COL6A6A6NMZ7 2263 aa2.28□□□□□ -2.04
SEMA3C-202ENST00000411788 C10orf95Q9H7T3 257 aa2.28□□□□□ -2.04
SEMA3C-202ENST00000411788 ANKRD17O75179 2603 aaKnown RBP2.28□□□□□ -2.04
SEMA3C-202ENST00000411788 TRIOBPQ9H2D6 2365 aa2.28□□□□□ -2.05
SEMA3C-202ENST00000411788 CACNA1BQ00975 2339 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms