RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 KRTAP10-11P60412 298 aa7.55□□□□□ -1.2
PRPF40A-202ENST00000410080 FAM218AQ96MZ4 157 aa7.54□□□□□ -1.2
PRPF40A-202ENST00000410080 TRBV7-4A0A0J9YYF1 115 aa7.54□□□□□ -1.2
PRPF40A-202ENST00000410080 LOC101927531A0A1B0GV80 90 aa7.54□□□□□ -1.2
PRPF40A-202ENST00000410080 REV3LO60673 3130 aa7.52□□□□□ -1.21
PRPF40A-202ENST00000410080 K7EIL1 84 aa7.52□□□□□ -1.21
PRPF40A-202ENST00000410080 COA5Q86WW8 74 aa7.51□□□□□ -1.21
PRPF40A-202ENST00000410080 USP9YO00507 2555 aaPredicted RBP7.51□□□□□ -1.21
PRPF40A-202ENST00000410080 A0A1B0GW54 56 aa7.51□□□□□ -1.21
PRPF40A-202ENST00000410080 UQCR11O14957 56 aa7.49□□□□□ -1.21
PRPF40A-202ENST00000410080 MIR22HGQ0VDD5 57 aa7.49□□□□□ -1.21
PRPF40A-202ENST00000410080 ZNF861PO60384 105 aa7.49□□□□□ -1.21
PRPF40A-202ENST00000410080 LINC00336Q6ZUF6 198 aa7.49□□□□□ -1.21
PRPF40A-202ENST00000410080 LUZP6Q538Z0 58 aa7.48□□□□□ -1.21
PRPF40A-202ENST00000410080 C15orf56Q8N910 161 aa7.48□□□□□ -1.21
PRPF40A-202ENST00000410080 LINC00528Q8N1L1 170 aa7.47□□□□□ -1.21
PRPF40A-202ENST00000410080 LOC110117498A0A087WWA1 95 aa7.47□□□□□ -1.21
PRPF40A-202ENST00000410080 IGLV1-50A0A075B6I6 118 aa7.47□□□□□ -1.21
PRPF40A-202ENST00000410080 Q6ZSA8 131 aa7.46□□□□□ -1.22
PRPF40A-202ENST00000410080 A0A087WTM6 91 aa7.46□□□□□ -1.22
PRPF40A-202ENST00000410080 Q8N1X5 172 aa7.46□□□□□ -1.22
PRPF40A-202ENST00000410080 IGLV5-48A0A075B6I7 105 aa7.45□□□□□ -1.22
PRPF40A-202ENST00000410080 A0A0G2JQZ4 141 aa7.45□□□□□ -1.22
PRPF40A-202ENST00000410080 A0A1W2PNN7 141 aa7.45□□□□□ -1.22
PRPF40A-202ENST00000410080 LINC01546A6NGU7 62 aa7.44□□□□□ -1.22
PRPF40A-202ENST00000410080 IGLV5-45A0A087WSX0 123 aa7.43□□□□□ -1.22
PRPF40A-202ENST00000410080 IGFL1Q6UW32 110 aa7.43□□□□□ -1.22
PRPF40A-202ENST00000410080 LINC00483Q53H64 154 aa7.43□□□□□ -1.22
PRPF40A-202ENST00000410080 A0A1B0GVX0 72 aa7.42□□□□□ -1.22
PRPF40A-202ENST00000410080 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
PRPF40A-202ENST00000410080 C8orf17Q9NRJ1 99 aa7.41□□□□□ -1.22
PRPF40A-202ENST00000410080 CDC42SE1Q9NRR8 79 aa7.4□□□□□ -1.22
PRPF40A-202ENST00000410080 IGLV7-43P04211 117 aa7.4□□□□□ -1.22
PRPF40A-202ENST00000410080 CFAP54Q96N23 3096 aa7.4□□□□□ -1.23
PRPF40A-202ENST00000410080 PRR15Q8IV56 129 aa7.39□□□□□ -1.23
PRPF40A-202ENST00000410080 PSORS1C2Q9UIG4 136 aa7.39□□□□□ -1.23
PRPF40A-202ENST00000410080 CFAP46Q8IYW2 2715 aa7.38□□□□□ -1.23
PRPF40A-202ENST00000410080 KRTAP10-3P60369 221 aa7.37□□□□□ -1.23
PRPF40A-202ENST00000410080 WIPF1O43516 503 aa7.37□□□□□ -1.23
PRPF40A-202ENST00000410080 MKI67P46013 3256 aaKnown RBP7.37□□□□□ -1.23
PRPF40A-202ENST00000410080 A8MUN3 132 aa7.36□□□□□ -1.23
PRPF40A-202ENST00000410080 LAMA2P24043 3122 aaKnown RBP7.35□□□□□ -1.23
PRPF40A-202ENST00000410080 CELSR3Q9NYQ7 3312 aa7.35□□□□□ -1.23
PRPF40A-202ENST00000410080 IGLV7-46A0A075B6I9 117 aa7.34□□□□□ -1.24
PRPF40A-202ENST00000410080 C9orf163Q8N9P6 203 aa7.33□□□□□ -1.24
PRPF40A-202ENST00000410080 KCNQ1DNQ9H478 68 aa7.33□□□□□ -1.24
PRPF40A-202ENST00000410080 EPG5Q9HCE0 2579 aa7.33□□□□□ -1.24
PRPF40A-202ENST00000410080 AKAP13Q12802 2813 aa7.32□□□□□ -1.24
PRPF40A-202ENST00000410080 CEP295Q9C0D2 2601 aa7.32□□□□□ -1.24
PRPF40A-202ENST00000410080 SMCPP49901 116 aaPredicted RBP7.32□□□□□ -1.24
PRPF40A-202ENST00000410080 Q8N377 158 aa7.3□□□□□ -1.24
PRPF40A-202ENST00000410080 FAM104AQ969W3 186 aa7.3□□□□□ -1.24
PRPF40A-202ENST00000410080 PRR26Q8N8Z3 221 aa7.29□□□□□ -1.24
PRPF40A-202ENST00000410080 CYP4F30PQ9H0H9 118 aa7.28□□□□□ -1.24
PRPF40A-202ENST00000410080 HRES1P13985 223 aa7.28□□□□□ -1.24
PRPF40A-202ENST00000410080 CD164Q04900 197 aa7.28□□□□□ -1.24
PRPF40A-202ENST00000410080 RPS28P62857 69 aaKnown RBP7.28□□□□□ -1.24
PRPF40A-202ENST00000410080 H3BS24 57 aa7.27□□□□□ -1.25
PRPF40A-202ENST00000410080 C19orf73Q9NVV2 129 aa7.27□□□□□ -1.25
PRPF40A-202ENST00000410080 DNAH14Q0VDD8 3507 aa7.26□□□□□ -1.25
PRPF40A-202ENST00000410080 CASC10Q5T4H9 136 aa7.25□□□□□ -1.25
PRPF40A-202ENST00000410080 KTN1-AS1Q86SY8 53 aa7.25□□□□□ -1.25
PRPF40A-202ENST00000410080 HECTD1Q9ULT8 2610 aa7.25□□□□□ -1.25
PRPF40A-202ENST00000410080 BRCA2P51587 3418 aa7.25□□□□□ -1.25
PRPF40A-202ENST00000410080 ERC2-IT1O76042 136 aa7.25□□□□□ -1.25
PRPF40A-202ENST00000410080 SPRR4Q96PI1 79 aa7.25□□□□□ -1.25
PRPF40A-202ENST00000410080 TNP2Q05952 138 aa7.24□□□□□ -1.25
PRPF40A-202ENST00000410080 LINC00612Q8N6U2 182 aa7.24□□□□□ -1.25
PRPF40A-202ENST00000410080 PLA2G2DQ9UNK4 145 aa7.24□□□□□ -1.25
PRPF40A-202ENST00000410080 MGAM2Q2M2H8 2515 aa7.23□□□□□ -1.25
PRPF40A-202ENST00000410080 S4R3F8 94 aa7.23□□□□□ -1.25
PRPF40A-202ENST00000410080 FREM2Q5SZK8 3169 aa7.22□□□□□ -1.25
PRPF40A-202ENST00000410080 LITAFQ99732 161 aa7.22□□□□□ -1.25
PRPF40A-202ENST00000410080 TLX1NBP0CAT3 122 aa7.21□□□□□ -1.25
PRPF40A-202ENST00000410080 LCA10Q71F78 164 aa7.2□□□□□ -1.26
PRPF40A-202ENST00000410080 PRO0461Q9UI25 63 aa7.19□□□□□ -1.26
PRPF40A-202ENST00000410080 ITPR3Q14573 2671 aa7.18□□□□□ -1.26
PRPF40A-202ENST00000410080 GIG44P09565 113 aaPredicted RBP7.17□□□□□ -1.26
PRPF40A-202ENST00000410080 PRR34Q9NV39 138 aa7.17□□□□□ -1.26
PRPF40A-202ENST00000410080 A0A096LNT2 108 aa7.17□□□□□ -1.26
PRPF40A-202ENST00000410080 FLNAP21333 2647 aaKnown RBP7.17□□□□□ -1.26
PRPF40A-202ENST00000410080 A0A0C4DFX4 3053 aa7.16□□□□□ -1.26
PRPF40A-202ENST00000410080 Q5VSD8 79 aa7.16□□□□□ -1.26
PRPF40A-202ENST00000410080 EIF4EBP3O60516 100 aaPredicted RBP7.15□□□□□ -1.26
PRPF40A-202ENST00000410080 RANBP2P49792 3224 aaKnown RBP7.14□□□□□ -1.27
PRPF40A-202ENST00000410080 Q1T7F1 81 aa7.14□□□□□ -1.27
PRPF40A-202ENST00000410080 CNBPP62633 177 aaKnown RBP7.13□□□□□ -1.27
PRPF40A-202ENST00000410080 LAMA3Q16787 3333 aa7.12□□□□□ -1.27
PRPF40A-202ENST00000410080 KRTAP1-3Q8IUG1 177 aa7.12□□□□□ -1.27
PRPF40A-202ENST00000410080 TRIOO75962 3097 aa7.12□□□□□ -1.27
PRPF40A-202ENST00000410080 CSAG1Q6PB30 78 aa7.12□□□□□ -1.27
PRPF40A-202ENST00000410080 A0A1B0GU33 70 aa7.11□□□□□ -1.27
PRPF40A-202ENST00000410080 PRUNE2Q8WUY3 3088 aa7.11□□□□□ -1.27
PRPF40A-202ENST00000410080 PLAC4Q8WY50 150 aa7.11□□□□□ -1.27
PRPF40A-202ENST00000410080 MAST4O15021 2626 aa7.1□□□□□ -1.27
PRPF40A-202ENST00000410080 R4GN34 69 aa7.1□□□□□ -1.27
PRPF40A-202ENST00000410080 ATRQ13535 2644 aa7.1□□□□□ -1.27
PRPF40A-202ENST00000410080 KLK9Q2XQG4 91 aa7.1□□□□□ -1.27
PRPF40A-202ENST00000410080 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
PRPF40A-202ENST00000410080 TEX15Q9BXT5 2789 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms