RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
SSB-202ENST00000409333 PRYO14603 147 aa10.49□□□□□ -0.73
SSB-202ENST00000409333 ZNF73O43830 326 aaPredicted RBP10.49□□□□□ -0.73
SSB-202ENST00000409333 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
SSB-202ENST00000409333 A0A1W2PPM0 123 aa10.47□□□□□ -0.73
SSB-202ENST00000409333 REG3GQ6UW15 175 aa10.47□□□□□ -0.73
SSB-202ENST00000409333 CBY1Q9Y3M2 126 aa10.47□□□□□ -0.73
SSB-202ENST00000409333 SPRR1AP35321 89 aa10.45□□□□□ -0.74
SSB-202ENST00000409333 KRTAP4-16G5E9R7 235 aaPredicted RBP10.44□□□□□ -0.74
SSB-202ENST00000409333 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
SSB-202ENST00000409333 XGP55808 180 aa10.44□□□□□ -0.74
SSB-202ENST00000409333 COX6CP09669 75 aa10.44□□□□□ -0.74
SSB-202ENST00000409333 CLEC2BQ92478 149 aa10.44□□□□□ -0.74
SSB-202ENST00000409333 FABP2P12104 132 aa10.42□□□□□ -0.74
SSB-202ENST00000409333 ELOF1P60002 83 aaKnown RBP10.42□□□□□ -0.74
SSB-202ENST00000409333 FAM218AQ96MZ4 157 aa10.42□□□□□ -0.74
SSB-202ENST00000409333 PSORS1C2Q9UIG4 136 aa10.42□□□□□ -0.74
SSB-202ENST00000409333 VPS13BQ7Z7G8 4022 aa10.41□□□□□ -0.74
SSB-202ENST00000409333 A0A1B0GV90 55 aa10.41□□□□□ -0.74
SSB-202ENST00000409333 ETDCA0A1B0GVM5 59 aa10.41□□□□□ -0.74
SSB-202ENST00000409333 TRBV7-6A0A0J9YX20 115 aa10.4□□□□□ -0.74
SSB-202ENST00000409333 B5MCH6 92 aa10.4□□□□□ -0.74
SSB-202ENST00000409333 TCL1BO95988 128 aa10.4□□□□□ -0.74
SSB-202ENST00000409333 COX7BP24311 80 aa10.4□□□□□ -0.74
SSB-202ENST00000409333 VAMP3Q15836 100 aa10.4□□□□□ -0.74
SSB-202ENST00000409333 LYRM7Q5U5X0 104 aa10.39□□□□□ -0.75
SSB-202ENST00000409333 FAM19A1Q7Z5A9 133 aa10.39□□□□□ -0.75
SSB-202ENST00000409333 H0YGX0 51 aa10.39□□□□□ -0.75
SSB-202ENST00000409333 Q6ZRX8 168 aa10.39□□□□□ -0.75
SSB-202ENST00000409333 PRLHP81277 87 aa10.38□□□□□ -0.75
SSB-202ENST00000409333 LINC00528Q8N1L1 170 aa10.38□□□□□ -0.75
SSB-202ENST00000409333 SPCS1Q9Y6A9 102 aa10.38□□□□□ -0.75
SSB-202ENST00000409333 HSPG2P98160 4391 aa10.38□□□□□ -0.75
SSB-202ENST00000409333 BCE1O60756 84 aa10.37□□□□□ -0.75
SSB-202ENST00000409333 C1orf137Q5JT78 98 aa10.37□□□□□ -0.75
SSB-202ENST00000409333 FAT1Q14517 4588 aa10.37□□□□□ -0.75
SSB-202ENST00000409333 LST1O00453 97 aa10.36□□□□□ -0.75
SSB-202ENST00000409333 LINC00575Q6W349 94 aa10.36□□□□□ -0.75
SSB-202ENST00000409333 Q9BRP9 147 aa10.36□□□□□ -0.75
SSB-202ENST00000409333 SMR3BP02814 79 aaPredicted RBP10.35□□□□□ -0.75
SSB-202ENST00000409333 K7EP34 96 aa10.34□□□□□ -0.75
SSB-202ENST00000409333 TRBV20-1A0A075B6N2 111 aa10.34□□□□□ -0.75
SSB-202ENST00000409333 ATXN8Q156A1 80 aa10.34□□□□□ -0.75
SSB-202ENST00000409333 UBE2AP49459 152 aa10.33□□□□□ -0.76
SSB-202ENST00000409333 KRTAP13-1Q8IUC0 172 aa10.33□□□□□ -0.76
SSB-202ENST00000409333 H3BMG7 143 aa10.32□□□□□ -0.76
SSB-202ENST00000409333 SMCR5Q8TEV8 140 aa10.32□□□□□ -0.76
SSB-202ENST00000409333 RYR1P21817 5038 aa10.32□□□□□ -0.76
SSB-202ENST00000409333 hADV29S1A0JD25 119 aa10.31□□□□□ -0.76
SSB-202ENST00000409333 H0Y9J4 135 aa10.31□□□□□ -0.76
SSB-202ENST00000409333 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
SSB-202ENST00000409333 SRRM2Q9UQ35 2752 aaKnown RBP10.3□□□□□ -0.76
SSB-202ENST00000409333 SLC25A20O43772 301 aa10.3□□□□□ -0.76
SSB-202ENST00000409333 HIGD2AQ9BW72 106 aa10.3□□□□□ -0.76
SSB-202ENST00000409333 DHRS4-AS1Q9P1J3 65 aa10.3□□□□□ -0.76
SSB-202ENST00000409333 ERC2-IT1O76042 136 aa10.29□□□□□ -0.76
SSB-202ENST00000409333 TRACP01848 142 aa10.29□□□□□ -0.76
SSB-202ENST00000409333 IGLV7-43P04211 117 aa10.29□□□□□ -0.76
SSB-202ENST00000409333 KIAA1109Q2LD37 5005 aa10.29□□□□□ -0.76
SSB-202ENST00000409333 A0A1B0GX51 115 aa10.29□□□□□ -0.76
SSB-202ENST00000409333 INAFM2P0DMQ5 153 aa10.29□□□□□ -0.76
SSB-202ENST00000409333 GTF2H5Q6ZYL4 71 aa10.29□□□□□ -0.76
SSB-202ENST00000409333 RPL37AP61513 92 aaKnown RBP10.27□□□□□ -0.77
SSB-202ENST00000409333 MTURNQ8N3F0 131 aa10.27□□□□□ -0.77
SSB-202ENST00000409333 ZNF861PO60384 105 aa10.26□□□□□ -0.77
SSB-202ENST00000409333 DNAL4O96015 105 aa10.26□□□□□ -0.77
SSB-202ENST00000409333 Q6ZQY7 126 aa10.26□□□□□ -0.77
SSB-202ENST00000409333 SNCGO76070 127 aa10.26□□□□□ -0.77
SSB-202ENST00000409333 C9JAW5 83 aa10.24□□□□□ -0.77
SSB-202ENST00000409333 ST20-AS1Q8NBB2 130 aa10.24□□□□□ -0.77
SSB-202ENST00000409333 UBE2V1Q13404 147 aa10.24□□□□□ -0.77
SSB-202ENST00000409333 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.23□□□□□ -0.77
SSB-202ENST00000409333 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
SSB-202ENST00000409333 ORMDL1Q9P0S3 153 aa10.21□□□□□ -0.78
SSB-202ENST00000409333 PRO0461Q9UI25 63 aa10.21□□□□□ -0.78
SSB-202ENST00000409333 LINC01547P58512 204 aaPredicted RBP10.19□□□□□ -0.78
SSB-202ENST00000409333 DEFB105AQ8NG35 78 aa10.19□□□□□ -0.78
SSB-202ENST00000409333 PKHD1L1Q86WI1 4243 aa10.19□□□□□ -0.78
SSB-202ENST00000409333 KRTAP17-1Q9BYP8 105 aa10.19□□□□□ -0.78
SSB-202ENST00000409333 BAALC-AS2P0C853 105 aa10.18□□□□□ -0.78
SSB-202ENST00000409333 SMCPP49901 116 aaPredicted RBP10.18□□□□□ -0.78
SSB-202ENST00000409333 IGLV5-48A0A075B6I7 105 aa10.16□□□□□ -0.78
SSB-202ENST00000409333 FAM229AH3BQW9 127 aa10.16□□□□□ -0.78
SSB-202ENST00000409333 OCIAD2Q56VL3 154 aa10.16□□□□□ -0.78
SSB-202ENST00000409333 Q5VSD8 79 aa10.16□□□□□ -0.78
SSB-202ENST00000409333 Q8N377 158 aa10.16□□□□□ -0.78
SSB-202ENST00000409333 BIRC6Q9NR09 4857 aa10.15□□□□□ -0.78
SSB-202ENST00000409333 H3BT86 120 aa10.15□□□□□ -0.78
SSB-202ENST00000409333 ANKRD29Q8N6D5 301 aa10.15□□□□□ -0.78
SSB-202ENST00000409333 GAGE2AQ6NT46 116 aa10.14□□□□□ -0.79
SSB-202ENST00000409333 SPRR4Q96PI1 79 aa10.14□□□□□ -0.79
SSB-202ENST00000409333 F8W1H4 67 aa10.14□□□□□ -0.79
SSB-202ENST00000409333 PLA2G1BP04054 148 aaKnown RBP10.14□□□□□ -0.79
SSB-202ENST00000409333 TMEM256-PLSCR3K7ERE1 68 aa10.13□□□□□ -0.79
SSB-202ENST00000409333 TEX49A0A1B0GTD5 131 aa10.12□□□□□ -0.79
SSB-202ENST00000409333 C3orf22Q8N5N4 141 aa10.12□□□□□ -0.79
SSB-202ENST00000409333 ZNF706Q9Y5V0 76 aaPredicted RBP10.11□□□□□ -0.79
SSB-202ENST00000409333 GHRHP01286 108 aa10.11□□□□□ -0.79
SSB-202ENST00000409333 SPINK6Q6UWN8 80 aa10.11□□□□□ -0.79
SSB-202ENST00000409333 SPRR1BP22528 89 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms