RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 CEND1Q8N111 149 aa12.7□□□□□ -0.38
C4orf48-201ENST00000409248 LINC00337Q8N6G1 96 aa12.7□□□□□ -0.38
C4orf48-201ENST00000409248 TMEM126AQ9H061 195 aa12.7□□□□□ -0.38
C4orf48-201ENST00000409248 KCNQ1DNQ9H478 68 aa12.7□□□□□ -0.38
C4orf48-201ENST00000409248 TRAV13-2A0A0B4J235 113 aa12.69□□□□□ -0.38
C4orf48-201ENST00000409248 A6NDN8 102 aa12.68□□□□□ -0.38
C4orf48-201ENST00000409248 DIRC1Q969H9 104 aa12.68□□□□□ -0.38
C4orf48-201ENST00000409248 LRP1Q07954 4544 aaKnown RBP12.68□□□□□ -0.38
C4orf48-201ENST00000409248 TRAV23DV6A0A075B6W5 121 aa12.67□□□□□ -0.38
C4orf48-201ENST00000409248 FAT3Q8TDW7 4589 aa12.67□□□□□ -0.38
C4orf48-201ENST00000409248 TMEM238LA0A1B0GVL6 79 aa12.66□□□□□ -0.38
C4orf48-201ENST00000409248 A6NJY4 79 aa12.66□□□□□ -0.38
C4orf48-201ENST00000409248 UBE2AP49459 152 aa12.65□□□□□ -0.38
C4orf48-201ENST00000409248 FAM19A1Q7Z5A9 133 aa12.64□□□□□ -0.39
C4orf48-201ENST00000409248 LINC01600Q96MT4 127 aa12.64□□□□□ -0.39
C4orf48-201ENST00000409248 SPRR1AP35321 89 aa12.63□□□□□ -0.39
C4orf48-201ENST00000409248 ETDCA0A1B0GVM5 59 aa12.62□□□□□ -0.39
C4orf48-201ENST00000409248 H0Y9J4 135 aa12.62□□□□□ -0.39
C4orf48-201ENST00000409248 MT1HL1P0DM35 61 aa12.62□□□□□ -0.39
C4orf48-201ENST00000409248 RPL28P46779 137 aaKnown RBP12.62□□□□□ -0.39
C4orf48-201ENST00000409248 FXYD2P54710 66 aa12.62□□□□□ -0.39
C4orf48-201ENST00000409248 ZNF73O43830 326 aaPredicted RBP12.61□□□□□ -0.39
C4orf48-201ENST00000409248 ZNF861PO60384 105 aa12.61□□□□□ -0.39
C4orf48-201ENST00000409248 RAB37Q96AX2 223 aa12.61□□□□□ -0.39
C4orf48-201ENST00000409248 A0A0B4J2C4 111 aa12.6□□□□□ -0.39
C4orf48-201ENST00000409248 HERC1Q15751 4861 aa12.6□□□□□ -0.39
C4orf48-201ENST00000409248 CFC1BP0CG36 223 aa12.59□□□□□ -0.39
C4orf48-201ENST00000409248 CFC1P0CG37 223 aa12.59□□□□□ -0.39
C4orf48-201ENST00000409248 RPL13AP40429 203 aaKnown RBP12.59□□□□□ -0.39
C4orf48-201ENST00000409248 PRLHP81277 87 aa12.59□□□□□ -0.39
C4orf48-201ENST00000409248 HINT1P49773 126 aaPredicted RBP12.58□□□□□ -0.4
C4orf48-201ENST00000409248 CTAG1AP78358 180 aa12.58□□□□□ -0.4
C4orf48-201ENST00000409248 KRTAP4-16G5E9R7 235 aaPredicted RBP12.57□□□□□ -0.4
C4orf48-201ENST00000409248 KRTAP13-1Q8IUC0 172 aa12.57□□□□□ -0.4
C4orf48-201ENST00000409248 M0R143 59 aa12.55□□□□□ -0.4
C4orf48-201ENST00000409248 C6orf99Q4VX62 202 aa12.55□□□□□ -0.4
C4orf48-201ENST00000409248 NHP2Q9NX24 153 aaKnown RBP12.55□□□□□ -0.4
C4orf48-201ENST00000409248 B5MCH6 92 aa12.54□□□□□ -0.4
C4orf48-201ENST00000409248 BVES-AS1Q5T3Y7 98 aa12.54□□□□□ -0.4
C4orf48-201ENST00000409248 SMIM11BQ8TCY0 68 aa12.54□□□□□ -0.4
C4orf48-201ENST00000409248 Q6ZRX8 168 aa12.53□□□□□ -0.4
C4orf48-201ENST00000409248 HIGD2AQ9BW72 106 aa12.52□□□□□ -0.41
C4orf48-201ENST00000409248 PRO1854Q9UHT4 67 aa12.52□□□□□ -0.41
C4orf48-201ENST00000409248 H7C2G1 150 aa12.51□□□□□ -0.41
C4orf48-201ENST00000409248 TRBV7-6A0A0J9YX20 115 aa12.5□□□□□ -0.41
C4orf48-201ENST00000409248 COX7BP24311 80 aa12.5□□□□□ -0.41
C4orf48-201ENST00000409248 A0A1B0GWB2 263 aa12.49□□□□□ -0.41
C4orf48-201ENST00000409248 KRTAP10-8P60410 259 aa12.49□□□□□ -0.41
C4orf48-201ENST00000409248 Q1RN00 199 aa12.49□□□□□ -0.41
C4orf48-201ENST00000409248 K7ERJ3 54 aa12.48□□□□□ -0.41
C4orf48-201ENST00000409248 ELOF1P60002 83 aaKnown RBP12.48□□□□□ -0.41
C4orf48-201ENST00000409248 KRTAP1-4P0C5Y4 121 aa12.47□□□□□ -0.41
C4orf48-201ENST00000409248 VAMP3Q15836 100 aa12.47□□□□□ -0.41
C4orf48-201ENST00000409248 SMCR5Q8TEV8 140 aa12.46□□□□□ -0.41
C4orf48-201ENST00000409248 Q9BRP9 147 aa12.45□□□□□ -0.42
C4orf48-201ENST00000409248 DHRS4-AS1Q9P1J3 65 aa12.45□□□□□ -0.42
C4orf48-201ENST00000409248 PRR26Q8N8Z3 221 aa12.44□□□□□ -0.42
C4orf48-201ENST00000409248 ZNF706Q9Y5V0 76 aaPredicted RBP12.42□□□□□ -0.42
C4orf48-201ENST00000409248 TNXBP22105 4242 aa12.42□□□□□ -0.42
C4orf48-201ENST00000409248 BATFQ16520 125 aa12.4□□□□□ -0.42
C4orf48-201ENST00000409248 ERC2-IT1O76042 136 aa12.39□□□□□ -0.43
C4orf48-201ENST00000409248 SLC25A20O43772 301 aa12.38□□□□□ -0.43
C4orf48-201ENST00000409248 TSPAN13O95857 204 aa12.38□□□□□ -0.43
C4orf48-201ENST00000409248 PSMB2P49721 201 aa12.37□□□□□ -0.43
C4orf48-201ENST00000409248 SPRR4Q96PI1 79 aa12.36□□□□□ -0.43
C4orf48-201ENST00000409248 H0YGX0 51 aa12.35□□□□□ -0.43
C4orf48-201ENST00000409248 TRIAP1O43715 76 aa12.35□□□□□ -0.43
C4orf48-201ENST00000409248 LINC00575Q6W349 94 aa12.35□□□□□ -0.43
C4orf48-201ENST00000409248 CRYGAP11844 174 aa12.34□□□□□ -0.43
C4orf48-201ENST00000409248 COX6CP09669 75 aa12.33□□□□□ -0.44
C4orf48-201ENST00000409248 FAM229BQ4G0N7 80 aa12.33□□□□□ -0.44
C4orf48-201ENST00000409248 PCP4L1A6NKN8 68 aa12.32□□□□□ -0.44
C4orf48-201ENST00000409248 GAGE2AQ6NT46 116 aa12.32□□□□□ -0.44
C4orf48-201ENST00000409248 hADV29S1A0JD25 119 aa12.31□□□□□ -0.44
C4orf48-201ENST00000409248 SNCGO76070 127 aa12.31□□□□□ -0.44
C4orf48-201ENST00000409248 ST20-AS1Q8NBB2 130 aa12.31□□□□□ -0.44
C4orf48-201ENST00000409248 A0A087X002 238 aa12.3□□□□□ -0.44
C4orf48-201ENST00000409248 ANAPC11Q9NYG5 84 aa12.3□□□□□ -0.44
C4orf48-201ENST00000409248 LINC00483Q53H64 154 aa12.28□□□□□ -0.44
C4orf48-201ENST00000409248 SCGB1C2P0DMR2 95 aa12.27□□□□□ -0.45
C4orf48-201ENST00000409248 TYMSOSQ8TAI1 123 aa12.27□□□□□ -0.45
C4orf48-201ENST00000409248 FAM218AQ96MZ4 157 aa12.26□□□□□ -0.45
C4orf48-201ENST00000409248 SNHG12Q9BXW3 62 aa12.26□□□□□ -0.45
C4orf48-201ENST00000409248 A0A1B0GX51 115 aa12.25□□□□□ -0.45
C4orf48-201ENST00000409248 DEFB105AQ8NG35 78 aa12.25□□□□□ -0.45
C4orf48-201ENST00000409248 HMCN2Q8NDA2 5059 aa12.25□□□□□ -0.45
C4orf48-201ENST00000409248 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.24□□□□□ -0.45
C4orf48-201ENST00000409248 Q6ZQY7 126 aa12.24□□□□□ -0.45
C4orf48-201ENST00000409248 CLEC2BQ92478 149 aa12.24□□□□□ -0.45
C4orf48-201ENST00000409248 TEX49A0A1B0GTD5 131 aa12.23□□□□□ -0.45
C4orf48-201ENST00000409248 SPRR1BP22528 89 aa12.23□□□□□ -0.45
C4orf48-201ENST00000409248 IGLV5-48A0A075B6I7 105 aa12.22□□□□□ -0.45
C4orf48-201ENST00000409248 NAA38Q9BRA0 125 aaKnown RBP12.22□□□□□ -0.45
C4orf48-201ENST00000409248 KRTAP13-2Q52LG2 175 aa12.21□□□□□ -0.45
C4orf48-201ENST00000409248 TAX1BP3O14907 124 aa12.19□□□□□ -0.46
C4orf48-201ENST00000409248 LINC01547P58512 204 aaPredicted RBP12.19□□□□□ -0.46
C4orf48-201ENST00000409248 COL5A1-AS1Q5SY13 56 aa12.19□□□□□ -0.46
C4orf48-201ENST00000409248 LYRM7Q5U5X0 104 aa12.19□□□□□ -0.46
C4orf48-201ENST00000409248 C9orf118A6NHY6 69 aa12.18□□□□□ -0.46
C4orf48-201ENST00000409248 H3BUT2 72 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms