RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 ETDCA0A1B0GVM5 59 aa5.59□□□□□ -1.51
SNX13-201ENST00000409076 LYRM9A8MSI8 78 aa5.59□□□□□ -1.51
SNX13-201ENST00000409076 TMEM258P61165 79 aa5.59□□□□□ -1.51
SNX13-201ENST00000409076 KRTAP1-1Q07627 177 aa5.59□□□□□ -1.51
SNX13-201ENST00000409076 WFDC13Q8IUB5 93 aa5.59□□□□□ -1.51
SNX13-201ENST00000409076 LINC00474Q9P2X8 69 aa5.59□□□□□ -1.51
SNX13-201ENST00000409076 LELP1Q5T871 98 aa5.59□□□□□ -1.52
SNX13-201ENST00000409076 A0A1B0GUV1 79 aa5.58□□□□□ -1.52
SNX13-201ENST00000409076 FUSP35637 526 aaKnown RBP eCLIP5.58□□□□□ -1.52
SNX13-201ENST00000409076 Q6ZQT0 140 aa5.58□□□□□ -1.52
SNX13-201ENST00000409076 CASC10Q5T4H9 136 aa5.58□□□□□ -1.52
SNX13-201ENST00000409076 PSCAO43653 123 aa5.57□□□□□ -1.52
SNX13-201ENST00000409076 ESRGQ1W209 222 aa5.57□□□□□ -1.52
SNX13-201ENST00000409076 SYCNQ0VAF6 134 aa5.56□□□□□ -1.52
SNX13-201ENST00000409076 Q6ZRP5 223 aa5.56□□□□□ -1.52
SNX13-201ENST00000409076 Q8NAQ8 132 aa5.56□□□□□ -1.52
SNX13-201ENST00000409076 SERTAD4-AS1Q5TG53 156 aa5.55□□□□□ -1.52
SNX13-201ENST00000409076 C11orf45Q8TAV5 145 aa5.55□□□□□ -1.52
SNX13-201ENST00000409076 PRLHP81277 87 aa5.55□□□□□ -1.52
SNX13-201ENST00000409076 FAM19A3Q7Z5A8 133 aa5.54□□□□□ -1.52
SNX13-201ENST00000409076 COL7A1Q02388 2944 aa5.54□□□□□ -1.52
SNX13-201ENST00000409076 MIFP14174 115 aa5.54□□□□□ -1.52
SNX13-201ENST00000409076 RPS28P62857 69 aaKnown RBP5.54□□□□□ -1.52
SNX13-201ENST00000409076 Q5XG85 94 aa5.53□□□□□ -1.52
SNX13-201ENST00000409076 UBE2DNLQ8IWF7 75 aa5.53□□□□□ -1.52
SNX13-201ENST00000409076 COX17Q14061 63 aa5.53□□□□□ -1.52
SNX13-201ENST00000409076 SMIM29Q86T20 159 aa5.52□□□□□ -1.53
SNX13-201ENST00000409076 C7orf33Q8WU49 177 aa5.52□□□□□ -1.53
SNX13-201ENST00000409076 NDUFC2O95298 119 aa5.52□□□□□ -1.53
SNX13-201ENST00000409076 RPL37AP61513 92 aaKnown RBP5.52□□□□□ -1.53
SNX13-201ENST00000409076 C16orf95Q9H693 158 aa5.52□□□□□ -1.53
SNX13-201ENST00000409076 M0R378 163 aa5.51□□□□□ -1.53
SNX13-201ENST00000409076 LINC00336Q6ZUF6 198 aa5.51□□□□□ -1.53
SNX13-201ENST00000409076 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
SNX13-201ENST00000409076 NDUFC2-KCTD14E9PQ53 114 aa5.5□□□□□ -1.53
SNX13-201ENST00000409076 PSPHP1O15172 72 aa5.5□□□□□ -1.53
SNX13-201ENST00000409076 VPREB1P12018 145 aa5.5□□□□□ -1.53
SNX13-201ENST00000409076 TMEM254Q8TBM7 123 aa5.5□□□□□ -1.53
SNX13-201ENST00000409076 IGLV6-57P01721 117 aa5.49□□□□□ -1.53
SNX13-201ENST00000409076 CHTF8P0CG12 524 aa5.49□□□□□ -1.53
SNX13-201ENST00000409076 C1orf137Q5JT78 98 aa5.49□□□□□ -1.53
SNX13-201ENST00000409076 ANK3Q12955 4377 aaKnown RBP5.49□□□□□ -1.53
SNX13-201ENST00000409076 KRTAP10-11P60412 298 aa5.49□□□□□ -1.53
SNX13-201ENST00000409076 C15orf56Q8N910 161 aa5.49□□□□□ -1.53
SNX13-201ENST00000409076 ERC2-IT1O76042 136 aa5.49□□□□□ -1.53
SNX13-201ENST00000409076 ATP5EP2Q5VTU8 51 aa5.48□□□□□ -1.53
SNX13-201ENST00000409076 TRBV7-6A0A0J9YX20 115 aa5.48□□□□□ -1.53
SNX13-201ENST00000409076 OBSCN-AS1Q96MR7 158 aa5.48□□□□□ -1.53
SNX13-201ENST00000409076 H7BZZ5 65 aa5.47□□□□□ -1.53
SNX13-201ENST00000409076 ELOF1P60002 83 aaKnown RBP5.47□□□□□ -1.53
SNX13-201ENST00000409076 A0A087WSZ3 146 aa5.47□□□□□ -1.53
SNX13-201ENST00000409076 LINC00167Q96N53 147 aa5.47□□□□□ -1.53
SNX13-201ENST00000409076 H0Y9J4 135 aa5.46□□□□□ -1.53
SNX13-201ENST00000409076 EGFEM1PQ0D2K5 195 aa5.46□□□□□ -1.53
SNX13-201ENST00000409076 NDUFS5O43920 106 aa5.46□□□□□ -1.54
SNX13-201ENST00000409076 FAM229BQ4G0N7 80 aa5.46□□□□□ -1.54
SNX13-201ENST00000409076 LINC00612Q8N6U2 182 aa5.45□□□□□ -1.54
SNX13-201ENST00000409076 Q8N377 158 aa5.44□□□□□ -1.54
SNX13-201ENST00000409076 IGLV9-49A0A0B4J1Y8 123 aa5.44□□□□□ -1.54
SNX13-201ENST00000409076 K7EQZ3 153 aa5.44□□□□□ -1.54
SNX13-201ENST00000409076 PRYO14603 147 aa5.44□□□□□ -1.54
SNX13-201ENST00000409076 SERP1Q9Y6X1 66 aa5.44□□□□□ -1.54
SNX13-201ENST00000409076 UBE2AP49459 152 aa5.43□□□□□ -1.54
SNX13-201ENST00000409076 LINC00528Q8N1L1 170 aa5.43□□□□□ -1.54
SNX13-201ENST00000409076 PRR34Q9NV39 138 aa5.43□□□□□ -1.54
SNX13-201ENST00000409076 LINC00208Q96KT6 92 aa5.42□□□□□ -1.54
SNX13-201ENST00000409076 PDE6GP18545 87 aa5.42□□□□□ -1.54
SNX13-201ENST00000409076 LOC110117498A0A087WWA1 95 aa5.42□□□□□ -1.54
SNX13-201ENST00000409076 PCOTHQ58A44 107 aa5.42□□□□□ -1.54
SNX13-201ENST00000409076 LINC00588Q9Y4M8 146 aa5.42□□□□□ -1.54
SNX13-201ENST00000409076 WIPF1O43516 503 aa5.41□□□□□ -1.54
SNX13-201ENST00000409076 IGKV4-1P06312 121 aa5.41□□□□□ -1.54
SNX13-201ENST00000409076 SPINK6Q6UWN8 80 aa5.41□□□□□ -1.54
SNX13-201ENST00000409076 TRBV7-4A0A0J9YYF1 115 aa5.41□□□□□ -1.54
SNX13-201ENST00000409076 FP248Q71RG6 208 aaPredicted RBP5.41□□□□□ -1.54
SNX13-201ENST00000409076 PHF5AQ7RTV0 110 aaKnown RBP5.41□□□□□ -1.54
SNX13-201ENST00000409076 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
SNX13-201ENST00000409076 A0A1W2PNM2 257 aa5.4□□□□□ -1.54
SNX13-201ENST00000409076 KRTAP24-1Q3LI83 254 aa5.4□□□□□ -1.54
SNX13-201ENST00000409076 MRPL55Q7Z7F7 128 aaKnown RBP5.4□□□□□ -1.54
SNX13-201ENST00000409076 Q9BRP9 147 aa5.4□□□□□ -1.54
SNX13-201ENST00000409076 SPTSSBQ8NFR3 76 aa5.4□□□□□ -1.54
SNX13-201ENST00000409076 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.55
SNX13-201ENST00000409076 RETNLBQ9BQ08 111 aa5.39□□□□□ -1.55
SNX13-201ENST00000409076 CXCL6P80162 114 aa5.39□□□□□ -1.55
SNX13-201ENST00000409076 LINC00476Q8WZB0 136 aa5.39□□□□□ -1.55
SNX13-201ENST00000409076 ANAPC11Q9NYG5 84 aa5.39□□□□□ -1.55
SNX13-201ENST00000409076 DNAH10OSP0CZ25 163 aa5.38□□□□□ -1.55
SNX13-201ENST00000409076 REG3GQ6UW15 175 aa5.37□□□□□ -1.55
SNX13-201ENST00000409076 Q6ZRX8 168 aa5.37□□□□□ -1.55
SNX13-201ENST00000409076 TGP01266 2768 aa5.36□□□□□ -1.55
SNX13-201ENST00000409076 KLKP1Q107X0 134 aa5.35□□□□□ -1.55
SNX13-201ENST00000409076 LINC01556Q5JQF7 62 aa5.35□□□□□ -1.55
SNX13-201ENST00000409076 DHRS4-AS1Q9P1J3 65 aa5.35□□□□□ -1.55
SNX13-201ENST00000409076 C1orf195Q5TG92 126 aa5.34□□□□□ -1.55
SNX13-201ENST00000409076 MP68P56378 58 aa5.34□□□□□ -1.55
SNX13-201ENST00000409076 GVQW2A0A096LPI5 108 aaPredicted RBP5.33□□□□□ -1.56
SNX13-201ENST00000409076 Q8NBF4 154 aa5.33□□□□□ -1.56
SNX13-201ENST00000409076 IGLV1-50A0A075B6I6 118 aa5.32□□□□□ -1.56
SNX13-201ENST00000409076 HCG22E2RYF7 251 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms