RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 NAA38Q9BRA0 125 aaKnown RBP12.78□□□□□ -0.36
CHKB-201ENST00000406938 KCNQ1DNQ9H478 68 aa12.77□□□□□ -0.36
CHKB-201ENST00000406938 CBY1Q9Y3M2 126 aa12.76□□□□□ -0.37
CHKB-201ENST00000406938 EPPK1P58107 5090 aaKnown RBP12.75□□□□□ -0.37
CHKB-201ENST00000406938 PRYO14603 147 aa12.75□□□□□ -0.37
CHKB-201ENST00000406938 RPL28P46779 137 aaKnown RBP12.75□□□□□ -0.37
CHKB-201ENST00000406938 ZNF73O43830 326 aaPredicted RBP12.74□□□□□ -0.37
CHKB-201ENST00000406938 XGP55808 180 aa12.74□□□□□ -0.37
CHKB-201ENST00000406938 LYRM7Q5U5X0 104 aa12.74□□□□□ -0.37
CHKB-201ENST00000406938 TRIAP1O43715 76 aa12.73□□□□□ -0.37
CHKB-201ENST00000406938 C6orf99Q4VX62 202 aa12.73□□□□□ -0.37
CHKB-201ENST00000406938 SPCS1Q9Y6A9 102 aa12.73□□□□□ -0.37
CHKB-201ENST00000406938 PSMB2P49721 201 aa12.73□□□□□ -0.37
CHKB-201ENST00000406938 REG3GQ6UW15 175 aa12.72□□□□□ -0.37
CHKB-201ENST00000406938 DIRC1Q969H9 104 aa12.72□□□□□ -0.37
CHKB-201ENST00000406938 APOBP04114 4563 aaKnown RBP12.72□□□□□ -0.37
CHKB-201ENST00000406938 SPRR1AP35321 89 aa12.7□□□□□ -0.38
CHKB-201ENST00000406938 PSORS1C2Q9UIG4 136 aa12.68□□□□□ -0.38
CHKB-201ENST00000406938 KRTAP4-16G5E9R7 235 aaPredicted RBP12.67□□□□□ -0.38
CHKB-201ENST00000406938 ETDCA0A1B0GVM5 59 aa12.66□□□□□ -0.38
CHKB-201ENST00000406938 SCGB1C2P0DMR2 95 aa12.66□□□□□ -0.38
CHKB-201ENST00000406938 COX6CP09669 75 aa12.65□□□□□ -0.38
CHKB-201ENST00000406938 ELOF1P60002 83 aaKnown RBP12.65□□□□□ -0.38
CHKB-201ENST00000406938 COX7BP24311 80 aa12.64□□□□□ -0.39
CHKB-201ENST00000406938 TRBV7-6A0A0J9YX20 115 aa12.63□□□□□ -0.39
CHKB-201ENST00000406938 F8W1H4 67 aa12.63□□□□□ -0.39
CHKB-201ENST00000406938 CDK2AP2O75956 126 aa12.63□□□□□ -0.39
CHKB-201ENST00000406938 FAM19A1Q7Z5A9 133 aa12.63□□□□□ -0.39
CHKB-201ENST00000406938 B5MCH6 92 aa12.62□□□□□ -0.39
CHKB-201ENST00000406938 BCE1O60756 84 aa12.62□□□□□ -0.39
CHKB-201ENST00000406938 C1orf137Q5JT78 98 aa12.62□□□□□ -0.39
CHKB-201ENST00000406938 K7ERU9 68 aa12.62□□□□□ -0.39
CHKB-201ENST00000406938 Q6ZRX8 168 aa12.62□□□□□ -0.39
CHKB-201ENST00000406938 TRBV20-1A0A075B6N2 111 aa12.61□□□□□ -0.39
CHKB-201ENST00000406938 SMR3BP02814 79 aaPredicted RBP12.61□□□□□ -0.39
CHKB-201ENST00000406938 PRLHP81277 87 aa12.61□□□□□ -0.39
CHKB-201ENST00000406938 CLEC2BQ92478 149 aa12.61□□□□□ -0.39
CHKB-201ENST00000406938 H0YGX0 51 aa12.6□□□□□ -0.39
CHKB-201ENST00000406938 LINC00528Q8N1L1 170 aa12.6□□□□□ -0.39
CHKB-201ENST00000406938 FAM218AQ96MZ4 157 aa12.59□□□□□ -0.39
CHKB-201ENST00000406938 UBE2AP49459 152 aa12.58□□□□□ -0.4
CHKB-201ENST00000406938 OCIAD2Q56VL3 154 aa12.57□□□□□ -0.4
CHKB-201ENST00000406938 H3BMG7 143 aa12.56□□□□□ -0.4
CHKB-201ENST00000406938 LINC00575Q6W349 94 aa12.56□□□□□ -0.4
CHKB-201ENST00000406938 KRTAP13-1Q8IUC0 172 aa12.56□□□□□ -0.4
CHKB-201ENST00000406938 Q9BRP9 147 aa12.56□□□□□ -0.4
CHKB-201ENST00000406938 TCL1BO95988 128 aa12.55□□□□□ -0.4
CHKB-201ENST00000406938 RYR1P21817 5038 aa12.55□□□□□ -0.4
CHKB-201ENST00000406938 H0Y9J4 135 aa12.55□□□□□ -0.4
CHKB-201ENST00000406938 IGLV7-43P04211 117 aa12.54□□□□□ -0.4
CHKB-201ENST00000406938 RPL37AP61513 92 aaKnown RBP12.54□□□□□ -0.4
CHKB-201ENST00000406938 LST1O00453 97 aa12.53□□□□□ -0.4
CHKB-201ENST00000406938 SMCR5Q8TEV8 140 aa12.53□□□□□ -0.4
CHKB-201ENST00000406938 HIGD2AQ9BW72 106 aa12.52□□□□□ -0.4
CHKB-201ENST00000406938 DHRS4-AS1Q9P1J3 65 aa12.52□□□□□ -0.4
CHKB-201ENST00000406938 KIAA1109Q2LD37 5005 aa12.52□□□□□ -0.41
CHKB-201ENST00000406938 hADV29S1A0JD25 119 aa12.51□□□□□ -0.41
CHKB-201ENST00000406938 SLC25A20O43772 301 aa12.51□□□□□ -0.41
CHKB-201ENST00000406938 HSPG2P98160 4391 aa12.51□□□□□ -0.41
CHKB-201ENST00000406938 J3QR89 54 aa12.51□□□□□ -0.41
CHKB-201ENST00000406938 INAFM2P0DMQ5 153 aa12.51□□□□□ -0.41
CHKB-201ENST00000406938 ATXN8Q156A1 80 aa12.51□□□□□ -0.41
CHKB-201ENST00000406938 VPS13BQ7Z7G8 4022 aa12.5□□□□□ -0.41
CHKB-201ENST00000406938 ZNF861PO60384 105 aa12.5□□□□□ -0.41
CHKB-201ENST00000406938 A0A1B0GX51 115 aa12.49□□□□□ -0.41
CHKB-201ENST00000406938 ERC2-IT1O76042 136 aa12.48□□□□□ -0.41
CHKB-201ENST00000406938 FAT1Q14517 4588 aa12.47□□□□□ -0.41
CHKB-201ENST00000406938 SNCGO76070 127 aa12.47□□□□□ -0.41
CHKB-201ENST00000406938 TRACP01848 142 aa12.47□□□□□ -0.41
CHKB-201ENST00000406938 DNAL4O96015 105 aa12.45□□□□□ -0.42
CHKB-201ENST00000406938 KRTAP10-4P60372 401 aaPredicted RBP12.45□□□□□ -0.42
CHKB-201ENST00000406938 Q6ZQY7 126 aa12.45□□□□□ -0.42
CHKB-201ENST00000406938 FAM229AH3BQW9 127 aa12.44□□□□□ -0.42
CHKB-201ENST00000406938 PRO0461Q9UI25 63 aa12.44□□□□□ -0.42
CHKB-201ENST00000406938 BIRC6Q9NR09 4857 aa12.43□□□□□ -0.42
CHKB-201ENST00000406938 ST20-AS1Q8NBB2 130 aa12.42□□□□□ -0.42
CHKB-201ENST00000406938 Q5VSD8 79 aa12.41□□□□□ -0.42
CHKB-201ENST00000406938 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.41□□□□□ -0.42
CHKB-201ENST00000406938 PLA2G1BP04054 148 aaKnown RBP12.4□□□□□ -0.42
CHKB-201ENST00000406938 SRRM2Q9UQ35 2752 aaKnown RBP12.39□□□□□ -0.43
CHKB-201ENST00000406938 C9JAW5 83 aa12.39□□□□□ -0.43
CHKB-201ENST00000406938 MTURNQ8N3F0 131 aa12.39□□□□□ -0.43
CHKB-201ENST00000406938 LINC01600Q96MT4 127 aa12.39□□□□□ -0.43
CHKB-201ENST00000406938 KRTAP17-1Q9BYP8 105 aa12.39□□□□□ -0.43
CHKB-201ENST00000406938 VPS25Q9BRG1 176 aa12.37□□□□□ -0.43
CHKB-201ENST00000406938 ORMDL1Q9P0S3 153 aa12.37□□□□□ -0.43
CHKB-201ENST00000406938 Q8N1X5 172 aa12.37□□□□□ -0.43
CHKB-201ENST00000406938 DEFB105AQ8NG35 78 aa12.36□□□□□ -0.43
CHKB-201ENST00000406938 IGLV5-48A0A075B6I7 105 aa12.35□□□□□ -0.43
CHKB-201ENST00000406938 LINC01547P58512 204 aaPredicted RBP12.35□□□□□ -0.43
CHKB-201ENST00000406938 SMCPP49901 116 aaPredicted RBP12.34□□□□□ -0.43
CHKB-201ENST00000406938 ETDBQ3ZM63 59 aa12.34□□□□□ -0.43
CHKB-201ENST00000406938 SPINK6Q6UWN8 80 aa12.34□□□□□ -0.43
CHKB-201ENST00000406938 SPRR4Q96PI1 79 aa12.34□□□□□ -0.43
CHKB-201ENST00000406938 TEN1Q86WV5 123 aa12.33□□□□□ -0.43
CHKB-201ENST00000406938 ZNF706Q9Y5V0 76 aaPredicted RBP12.33□□□□□ -0.43
CHKB-201ENST00000406938 GAGE2AQ6NT46 116 aa12.33□□□□□ -0.44
CHKB-201ENST00000406938 ANKRD29Q8N6D5 301 aa12.33□□□□□ -0.44
CHKB-201ENST00000406938 Q8N377 158 aa12.32□□□□□ -0.44
CHKB-201ENST00000406938 BAALC-AS2P0C853 105 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms