RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 LINC00304Q8N9R0 145 aa8.1□□□□□ -1.11
SMCR8-201ENST00000406438 KRTAP24-1Q3LI83 254 aa8.1□□□□□ -1.11
SMCR8-201ENST00000406438 COA5Q86WW8 74 aa8.1□□□□□ -1.11
SMCR8-201ENST00000406438 HECTD1Q9ULT8 2610 aa8.1□□□□□ -1.11
SMCR8-201ENST00000406438 ERC2-IT1O76042 136 aa8.09□□□□□ -1.11
SMCR8-201ENST00000406438 CYP4F30PQ9H0H9 118 aa8.09□□□□□ -1.11
SMCR8-201ENST00000406438 CFAP46Q8IYW2 2715 aa8.09□□□□□ -1.11
SMCR8-201ENST00000406438 MGAM2Q2M2H8 2515 aa8.08□□□□□ -1.12
SMCR8-201ENST00000406438 PRO0461Q9UI25 63 aa8.08□□□□□ -1.12
SMCR8-201ENST00000406438 RBM12B-AS1Q9P1G2 102 aa8.07□□□□□ -1.12
SMCR8-201ENST00000406438 OBSCN-AS1Q96MR7 158 aa8.07□□□□□ -1.12
SMCR8-201ENST00000406438 C9orf92A6NGG3 77 aa8.05□□□□□ -1.12
SMCR8-201ENST00000406438 FLNAP21333 2647 aaKnown RBP8.04□□□□□ -1.12
SMCR8-201ENST00000406438 KCNQ1DNQ9H478 68 aa8.04□□□□□ -1.12
SMCR8-201ENST00000406438 MIR22HGQ0VDD5 57 aa8.04□□□□□ -1.12
SMCR8-201ENST00000406438 CFAP54Q96N23 3096 aa8.04□□□□□ -1.12
SMCR8-201ENST00000406438 DSCR10P59022 87 aa8.03□□□□□ -1.12
SMCR8-201ENST00000406438 IGLV1-50A0A075B6I6 118 aa8.03□□□□□ -1.12
SMCR8-201ENST00000406438 MAST4O15021 2626 aa8.03□□□□□ -1.12
SMCR8-201ENST00000406438 ZNF861PO60384 105 aa8.03□□□□□ -1.12
SMCR8-201ENST00000406438 ITPR3Q14573 2671 aa8.02□□□□□ -1.13
SMCR8-201ENST00000406438 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
SMCR8-201ENST00000406438 PRR15Q8IV56 129 aa8.01□□□□□ -1.13
SMCR8-201ENST00000406438 C9orf129Q5T035 196 aaKnown RBP8.01□□□□□ -1.13
SMCR8-201ENST00000406438 IGFL1Q6UW32 110 aa8□□□□□ -1.13
SMCR8-201ENST00000406438 IGLV5-37A0A075B6J1 123 aa8□□□□□ -1.13
SMCR8-201ENST00000406438 LAMA2P24043 3122 aaKnown RBP8□□□□□ -1.13
SMCR8-201ENST00000406438 CENPEQ02224 2701 aa7.99□□□□□ -1.13
SMCR8-201ENST00000406438 ATRQ13535 2644 aa7.99□□□□□ -1.13
SMCR8-201ENST00000406438 C8orf17Q9NRJ1 99 aa7.98□□□□□ -1.13
SMCR8-201ENST00000406438 CSNK1G2-AS1Q8NCQ2 148 aa7.98□□□□□ -1.13
SMCR8-201ENST00000406438 LINC01554Q52M75 96 aa7.97□□□□□ -1.13
SMCR8-201ENST00000406438 LITAFQ99732 161 aa7.96□□□□□ -1.13
SMCR8-201ENST00000406438 FLNBO75369 2602 aaKnown RBP7.96□□□□□ -1.13
SMCR8-201ENST00000406438 A8MUN3 132 aa7.96□□□□□ -1.13
SMCR8-201ENST00000406438 LINC00528Q8N1L1 170 aa7.96□□□□□ -1.14
SMCR8-201ENST00000406438 LUZP6Q538Z0 58 aa7.94□□□□□ -1.14
SMCR8-201ENST00000406438 C15orf56Q8N910 161 aa7.94□□□□□ -1.14
SMCR8-201ENST00000406438 KRTAP10-11P60412 298 aa7.93□□□□□ -1.14
SMCR8-201ENST00000406438 Q8N377 158 aa7.93□□□□□ -1.14
SMCR8-201ENST00000406438 CDC42SE1Q9NRR8 79 aa7.93□□□□□ -1.14
SMCR8-201ENST00000406438 PLA2G2DQ9UNK4 145 aa7.93□□□□□ -1.14
SMCR8-201ENST00000406438 SMR3BP02814 79 aaPredicted RBP7.92□□□□□ -1.14
SMCR8-201ENST00000406438 K7EIL1 84 aa7.92□□□□□ -1.14
SMCR8-201ENST00000406438 CHD6Q8TD26 2715 aa7.91□□□□□ -1.14
SMCR8-201ENST00000406438 HELZ2Q9BYK8 2649 aaKnown RBP7.91□□□□□ -1.14
SMCR8-201ENST00000406438 KTN1-AS1Q86SY8 53 aa7.91□□□□□ -1.14
SMCR8-201ENST00000406438 PRR34Q9NV39 138 aa7.91□□□□□ -1.14
SMCR8-201ENST00000406438 A0A087WTM6 91 aa7.91□□□□□ -1.14
SMCR8-201ENST00000406438 KLKP1Q107X0 134 aa7.91□□□□□ -1.14
SMCR8-201ENST00000406438 A0A0D9SG42 100 aa7.9□□□□□ -1.14
SMCR8-201ENST00000406438 TLX1NBP0CAT3 122 aa7.9□□□□□ -1.15
SMCR8-201ENST00000406438 LINC00336Q6ZUF6 198 aa7.89□□□□□ -1.15
SMCR8-201ENST00000406438 NBEAL1Q6ZS30 2694 aa7.89□□□□□ -1.15
SMCR8-201ENST00000406438 XIRP2A4UGR9 3374 aa7.89□□□□□ -1.15
SMCR8-201ENST00000406438 KLK9Q2XQG4 91 aa7.88□□□□□ -1.15
SMCR8-201ENST00000406438 IGLV7-43P04211 117 aa7.88□□□□□ -1.15
SMCR8-201ENST00000406438 TEX15Q9BXT5 2789 aa7.87□□□□□ -1.15
SMCR8-201ENST00000406438 C19orf73Q9NVV2 129 aa7.85□□□□□ -1.15
SMCR8-201ENST00000406438 LCA10Q71F78 164 aa7.85□□□□□ -1.15
SMCR8-201ENST00000406438 C9orf163Q8N9P6 203 aa7.85□□□□□ -1.15
SMCR8-201ENST00000406438 PSORS1C2Q9UIG4 136 aa7.85□□□□□ -1.15
SMCR8-201ENST00000406438 FAM104AQ969W3 186 aa7.84□□□□□ -1.15
SMCR8-201ENST00000406438 SPANXA2-OT1Q8N9U9 137 aa7.84□□□□□ -1.15
SMCR8-201ENST00000406438 ANAPC11Q9NYG5 84 aa7.84□□□□□ -1.15
SMCR8-201ENST00000406438 IGLV5-48A0A075B6I7 105 aa7.81□□□□□ -1.16
SMCR8-201ENST00000406438 LINC00483Q53H64 154 aa7.81□□□□□ -1.16
SMCR8-201ENST00000406438 SPRR4Q96PI1 79 aa7.81□□□□□ -1.16
SMCR8-201ENST00000406438 KMT2BQ9UMN6 2715 aaPredicted RBP7.81□□□□□ -1.16
SMCR8-201ENST00000406438 Q8N1X5 172 aa7.81□□□□□ -1.16
SMCR8-201ENST00000406438 H7BZZ5 65 aa7.8□□□□□ -1.16
SMCR8-201ENST00000406438 M0R2T5 61 aa7.8□□□□□ -1.16
SMCR8-201ENST00000406438 CNBPP62633 177 aaKnown RBP7.79□□□□□ -1.16
SMCR8-201ENST00000406438 A0A0G2JQZ4 141 aa7.79□□□□□ -1.16
SMCR8-201ENST00000406438 A0A1W2PNN7 141 aa7.79□□□□□ -1.16
SMCR8-201ENST00000406438 Q6ZSA8 131 aa7.79□□□□□ -1.16
SMCR8-201ENST00000406438 MKI67P46013 3256 aaKnown RBP7.79□□□□□ -1.16
SMCR8-201ENST00000406438 STAB1Q9NY15 2570 aa7.78□□□□□ -1.16
SMCR8-201ENST00000406438 ZNF575Q86XF7 245 aa7.78□□□□□ -1.16
SMCR8-201ENST00000406438 A0A0C4DFX4 3053 aa7.77□□□□□ -1.17
SMCR8-201ENST00000406438 CAMK2N1Q7Z7J9 78 aa7.77□□□□□ -1.17
SMCR8-201ENST00000406438 EIF4EBP3O60516 100 aaPredicted RBP7.76□□□□□ -1.17
SMCR8-201ENST00000406438 GIG44P09565 113 aaPredicted RBP7.76□□□□□ -1.17
SMCR8-201ENST00000406438 UNC79Q9P2D8 2635 aa7.74□□□□□ -1.17
SMCR8-201ENST00000406438 LINC00612Q8N6U2 182 aa7.73□□□□□ -1.17
SMCR8-201ENST00000406438 COL6A5A8TX70 2615 aa7.73□□□□□ -1.17
SMCR8-201ENST00000406438 KRTAP10-3P60369 221 aa7.72□□□□□ -1.17
SMCR8-201ENST00000406438 Q1T7F1 81 aa7.71□□□□□ -1.18
SMCR8-201ENST00000406438 DMBT1Q9UGM3 2413 aaPredicted RBP7.68□□□□□ -1.18
SMCR8-201ENST00000406438 IGLV7-46A0A075B6I9 117 aa7.68□□□□□ -1.18
SMCR8-201ENST00000406438 CELSR3Q9NYQ7 3312 aa7.67□□□□□ -1.18
SMCR8-201ENST00000406438 VPS13AQ96RL7 3174 aa7.66□□□□□ -1.18
SMCR8-201ENST00000406438 HRES1P13985 223 aa7.66□□□□□ -1.18
SMCR8-201ENST00000406438 A0A1W2PNM2 257 aa7.66□□□□□ -1.18
SMCR8-201ENST00000406438 GCN1Q92616 2671 aaKnown RBP7.66□□□□□ -1.18
SMCR8-201ENST00000406438 A0A096LNT2 108 aa7.66□□□□□ -1.18
SMCR8-201ENST00000406438 PRR26Q8N8Z3 221 aa7.66□□□□□ -1.18
SMCR8-201ENST00000406438 MAP1AP78559 2803 aaPredicted RBP7.65□□□□□ -1.18
SMCR8-201ENST00000406438 REV3LO60673 3130 aa7.65□□□□□ -1.18
SMCR8-201ENST00000406438 TRIOO75962 3097 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms