RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 SSBP3-AS1Q7Z2R9 100 aa12.19□□□□□ -0.46
USP25-204ENST00000400183 COA5Q86WW8 74 aa12.19□□□□□ -0.46
USP25-204ENST00000400183 PRR15Q8IV56 129 aa12.19□□□□□ -0.46
USP25-204ENST00000400183 PCSK5Q92824 1860 aa12.19□□□□□ -0.46
USP25-204ENST00000400183 ZNF861PO60384 105 aa12.18□□□□□ -0.46
USP25-204ENST00000400183 GIG44P09565 113 aaPredicted RBP12.18□□□□□ -0.46
USP25-204ENST00000400183 C8orf17Q9NRJ1 99 aa12.18□□□□□ -0.46
USP25-204ENST00000400183 A0A096LNT2 108 aa12.18□□□□□ -0.46
USP25-204ENST00000400183 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
USP25-204ENST00000400183 LINC00612Q8N6U2 182 aa12.17□□□□□ -0.46
USP25-204ENST00000400183 J3QL48 77 aa12.17□□□□□ -0.46
USP25-204ENST00000400183 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
USP25-204ENST00000400183 Q8N377 158 aa12.15□□□□□ -0.46
USP25-204ENST00000400183 H7BZZ5 65 aa12.15□□□□□ -0.46
USP25-204ENST00000400183 DSCR10P59022 87 aa12.14□□□□□ -0.47
USP25-204ENST00000400183 LINC00304Q8N9R0 145 aa12.13□□□□□ -0.47
USP25-204ENST00000400183 TLX1NBP0CAT3 122 aa12.13□□□□□ -0.47
USP25-204ENST00000400183 C9orf163Q8N9P6 203 aa12.13□□□□□ -0.47
USP25-204ENST00000400183 CYP4F30PQ9H0H9 118 aa12.13□□□□□ -0.47
USP25-204ENST00000400183 A0A1B0GVX0 72 aa12.13□□□□□ -0.47
USP25-204ENST00000400183 A0A087WTM6 91 aa12.12□□□□□ -0.47
USP25-204ENST00000400183 UQCR11O14957 56 aa12.12□□□□□ -0.47
USP25-204ENST00000400183 PLA2G2DQ9UNK4 145 aa12.12□□□□□ -0.47
USP25-204ENST00000400183 HECTD1Q9ULT8 2610 aa12.11□□□□□ -0.47
USP25-204ENST00000400183 KRTAP10-3P60369 221 aa12.08□□□□□ -0.48
USP25-204ENST00000400183 OBSCN-AS1Q96MR7 158 aa12.07□□□□□ -0.48
USP25-204ENST00000400183 COX6B2Q6YFQ2 88 aa12.07□□□□□ -0.48
USP25-204ENST00000400183 SPINT4Q6UDR6 99 aa12.05□□□□□ -0.48
USP25-204ENST00000400183 A0A0G2JQZ4 141 aa12.03□□□□□ -0.48
USP25-204ENST00000400183 A0A1W2PNN7 141 aa12.03□□□□□ -0.48
USP25-204ENST00000400183 IGLV7-43P04211 117 aa12□□□□□ -0.49
USP25-204ENST00000400183 C9orf92A6NGG3 77 aa12□□□□□ -0.49
USP25-204ENST00000400183 ATRQ13535 2644 aa11.98□□□□□ -0.49
USP25-204ENST00000400183 ANAPC11Q9NYG5 84 aa11.98□□□□□ -0.49
USP25-204ENST00000400183 PSORS1C2Q9UIG4 136 aa11.97□□□□□ -0.49
USP25-204ENST00000400183 CNBPP62633 177 aaKnown RBP11.97□□□□□ -0.49
USP25-204ENST00000400183 MIR22HGQ0VDD5 57 aa11.97□□□□□ -0.49
USP25-204ENST00000400183 PRRC2CQ9Y520 2896 aaKnown RBP11.97□□□□□ -0.49
USP25-204ENST00000400183 SMR3BP02814 79 aaPredicted RBP11.97□□□□□ -0.49
USP25-204ENST00000400183 MAST4O15021 2626 aa11.96□□□□□ -0.49
USP25-204ENST00000400183 SPRR4Q96PI1 79 aa11.96□□□□□ -0.49
USP25-204ENST00000400183 CD164Q04900 197 aa11.96□□□□□ -0.49
USP25-204ENST00000400183 APLNQ9ULZ1 77 aa11.96□□□□□ -0.5
USP25-204ENST00000400183 A0A1W2PNM2 257 aa11.94□□□□□ -0.5
USP25-204ENST00000400183 CASC10Q5T4H9 136 aa11.94□□□□□ -0.5
USP25-204ENST00000400183 ZNF575Q86XF7 245 aa11.93□□□□□ -0.5
USP25-204ENST00000400183 CRIPTQ9P021 101 aa11.92□□□□□ -0.5
USP25-204ENST00000400183 IGLV5-37A0A075B6J1 123 aa11.88□□□□□ -0.51
USP25-204ENST00000400183 KTN1-AS1Q86SY8 53 aa11.87□□□□□ -0.51
USP25-204ENST00000400183 KRTAP1-3Q8IUG1 177 aa11.87□□□□□ -0.51
USP25-204ENST00000400183 BPTFQ12830 3046 aa11.85□□□□□ -0.51
USP25-204ENST00000400183 IGLV5-48A0A075B6I7 105 aa11.84□□□□□ -0.51
USP25-204ENST00000400183 RBM12B-AS1Q9P1G2 102 aa11.84□□□□□ -0.51
USP25-204ENST00000400183 WIPF1O43516 503 aa11.84□□□□□ -0.51
USP25-204ENST00000400183 SPANXA2-OT1Q8N9U9 137 aa11.83□□□□□ -0.52
USP25-204ENST00000400183 KRTAP1-1Q07627 177 aa11.82□□□□□ -0.52
USP25-204ENST00000400183 DNAH12Q6ZR08 3092 aa11.81□□□□□ -0.52
USP25-204ENST00000400183 FAM104AQ969W3 186 aa11.8□□□□□ -0.52
USP25-204ENST00000400183 FLNAP21333 2647 aaKnown RBP11.78□□□□□ -0.52
USP25-204ENST00000400183 LCA10Q71F78 164 aa11.76□□□□□ -0.53
USP25-204ENST00000400183 Q8N1X5 172 aa11.76□□□□□ -0.53
USP25-204ENST00000400183 OCR1Q9BZK8 76 aa11.72□□□□□ -0.53
USP25-204ENST00000400183 LINC01554Q52M75 96 aa11.7□□□□□ -0.54
USP25-204ENST00000400183 ITPR3Q14573 2671 aa11.69□□□□□ -0.54
USP25-204ENST00000400183 Q5XG85 94 aa11.69□□□□□ -0.54
USP25-204ENST00000400183 CDC42SE1Q9NRR8 79 aa11.69□□□□□ -0.54
USP25-204ENST00000400183 Q1T7F1 81 aa11.68□□□□□ -0.54
USP25-204ENST00000400183 A0A0D9SG42 100 aa11.67□□□□□ -0.54
USP25-204ENST00000400183 TNP2Q05952 138 aa11.67□□□□□ -0.54
USP25-204ENST00000400183 CYSTM1Q9H1C7 97 aa11.67□□□□□ -0.54
USP25-204ENST00000400183 HELZ2Q9BYK8 2649 aaKnown RBP11.66□□□□□ -0.54
USP25-204ENST00000400183 CR1P17927 2039 aa11.66□□□□□ -0.54
USP25-204ENST00000400183 CEP350Q5VT06 3117 aa11.63□□□□□ -0.55
USP25-204ENST00000400183 STAB1Q9NY15 2570 aa11.62□□□□□ -0.55
USP25-204ENST00000400183 PRR26Q8N8Z3 221 aa11.61□□□□□ -0.55
USP25-204ENST00000400183 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.6□□□□□ -0.55
USP25-204ENST00000400183 Q6ZSA8 131 aa11.58□□□□□ -0.56
USP25-204ENST00000400183 FP248Q71RG6 208 aaPredicted RBP11.57□□□□□ -0.56
USP25-204ENST00000400183 FAM229BQ4G0N7 80 aa11.56□□□□□ -0.56
USP25-204ENST00000400183 IGLV7-46A0A075B6I9 117 aa11.54□□□□□ -0.56
USP25-204ENST00000400183 PCNTO95613 3336 aa11.53□□□□□ -0.56
USP25-204ENST00000400183 CFAP46Q8IYW2 2715 aa11.5□□□□□ -0.57
USP25-204ENST00000400183 HRES1P13985 223 aa11.5□□□□□ -0.57
USP25-204ENST00000400183 UTRNP46939 3433 aa11.48□□□□□ -0.57
USP25-204ENST00000400183 PLAC8Q9NZF1 115 aa11.46□□□□□ -0.58
USP25-204ENST00000400183 A0A1B0GU33 70 aa11.45□□□□□ -0.58
USP25-204ENST00000400183 CENPEQ02224 2701 aa11.45□□□□□ -0.58
USP25-204ENST00000400183 Q75L30 129 aa11.45□□□□□ -0.58
USP25-204ENST00000400183 SPRR1AP35321 89 aa11.44□□□□□ -0.58
USP25-204ENST00000400183 MMP24-AS1A0A0U1RRL7 71 aa11.43□□□□□ -0.58
USP25-204ENST00000400183 OXTP01178 125 aa11.43□□□□□ -0.58
USP25-204ENST00000400183 AKAP13Q12802 2813 aa11.42□□□□□ -0.58
USP25-204ENST00000400183 A0A0C4DFX4 3053 aa11.41□□□□□ -0.58
USP25-204ENST00000400183 CAMK2N1Q7Z7J9 78 aa11.41□□□□□ -0.58
USP25-204ENST00000400183 Q8N9P0 234 aaPredicted RBP11.4□□□□□ -0.58
USP25-204ENST00000400183 Q8NDZ9 215 aa11.39□□□□□ -0.59
USP25-204ENST00000400183 LUZP6Q538Z0 58 aa11.39□□□□□ -0.59
USP25-204ENST00000400183 ZCCHC13Q8WW36 166 aaKnown RBP11.39□□□□□ -0.59
USP25-204ENST00000400183 SPRR1BP22528 89 aa11.34□□□□□ -0.59
USP25-204ENST00000400183 FLG2Q5D862 2391 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms