RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 PRR34Q9NV39 138 aa6.57□□□□□ -1.36
PTPRM-203ENST00000400060 MRPL34Q9BQ48 92 aaKnown RBP6.56□□□□□ -1.36
PTPRM-203ENST00000400060 LRRK2Q5S007 2527 aa6.56□□□□□ -1.36
PTPRM-203ENST00000400060 DOPEY1Q5JWR5 2465 aa6.56□□□□□ -1.36
PTPRM-203ENST00000400060 IGFL1Q6UW32 110 aa6.56□□□□□ -1.36
PTPRM-203ENST00000400060 LINC00612Q8N6U2 182 aa6.56□□□□□ -1.36
PTPRM-203ENST00000400060 LINC01556Q5JQF7 62 aa6.56□□□□□ -1.36
PTPRM-203ENST00000400060 JMJD1CQ15652 2540 aa6.55□□□□□ -1.36
PTPRM-203ENST00000400060 PRRC2CQ9Y520 2896 aaKnown RBP6.55□□□□□ -1.36
PTPRM-203ENST00000400060 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
PTPRM-203ENST00000400060 IGLV9-49A0A0B4J1Y8 123 aa6.54□□□□□ -1.36
PTPRM-203ENST00000400060 TLX1NBP0CAT3 122 aa6.54□□□□□ -1.36
PTPRM-203ENST00000400060 ZFYVE26Q68DK2 2539 aa6.54□□□□□ -1.36
PTPRM-203ENST00000400060 MKI67P46013 3256 aaKnown RBP6.53□□□□□ -1.36
PTPRM-203ENST00000400060 ZNF462Q96JM2 2506 aa6.53□□□□□ -1.36
PTPRM-203ENST00000400060 PKD1L2Q7Z442 2459 aa6.53□□□□□ -1.36
PTPRM-203ENST00000400060 C8orf17Q9NRJ1 99 aa6.52□□□□□ -1.37
PTPRM-203ENST00000400060 IGLV5-37A0A075B6J1 123 aa6.52□□□□□ -1.37
PTPRM-203ENST00000400060 LAMA2P24043 3122 aaKnown RBP6.52□□□□□ -1.37
PTPRM-203ENST00000400060 CHD9Q3L8U1 2897 aa6.51□□□□□ -1.37
PTPRM-203ENST00000400060 SMR3AQ99954 134 aa6.51□□□□□ -1.37
PTPRM-203ENST00000400060 MTORP42345 2549 aa6.5□□□□□ -1.37
PTPRM-203ENST00000400060 FAM229AH3BQW9 127 aa6.5□□□□□ -1.37
PTPRM-203ENST00000400060 SPINK6Q6UWN8 80 aa6.5□□□□□ -1.37
PTPRM-203ENST00000400060 X6R8D5 127 aa6.5□□□□□ -1.37
PTPRM-203ENST00000400060 PRLHP81277 87 aa6.5□□□□□ -1.37
PTPRM-203ENST00000400060 CSNK1G2-AS1Q8NCQ2 148 aa6.5□□□□□ -1.37
PTPRM-203ENST00000400060 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
PTPRM-203ENST00000400060 SPINT4Q6UDR6 99 aa6.49□□□□□ -1.37
PTPRM-203ENST00000400060 POLQO75417 2590 aa6.48□□□□□ -1.37
PTPRM-203ENST00000400060 A0A1B0GVX0 72 aa6.47□□□□□ -1.37
PTPRM-203ENST00000400060 Q8NAQ8 132 aa6.47□□□□□ -1.37
PTPRM-203ENST00000400060 ANKRD17O75179 2603 aaKnown RBP6.47□□□□□ -1.37
PTPRM-203ENST00000400060 C15orf56Q8N910 161 aa6.45□□□□□ -1.38
PTPRM-203ENST00000400060 PRAC1Q96KF2 57 aa6.44□□□□□ -1.38
PTPRM-203ENST00000400060 SPINK7P58062 85 aa6.43□□□□□ -1.38
PTPRM-203ENST00000400060 LAMA3Q16787 3333 aa6.43□□□□□ -1.38
PTPRM-203ENST00000400060 C5orf42Q9H799 3197 aa6.42□□□□□ -1.38
PTPRM-203ENST00000400060 IGLV8-61A0A075B6I0 122 aa6.41□□□□□ -1.38
PTPRM-203ENST00000400060 TRANK1O15050 2925 aa6.41□□□□□ -1.38
PTPRM-203ENST00000400060 CNBPP62633 177 aaKnown RBP6.41□□□□□ -1.38
PTPRM-203ENST00000400060 C9orf163Q8N9P6 203 aa6.41□□□□□ -1.38
PTPRM-203ENST00000400060 GIG44P09565 113 aaPredicted RBP6.4□□□□□ -1.38
PTPRM-203ENST00000400060 C1orf134Q5TEV5 83 aa6.4□□□□□ -1.38
PTPRM-203ENST00000400060 ACANP16112 2415 aa6.4□□□□□ -1.38
PTPRM-203ENST00000400060 HRES1P13985 223 aa6.4□□□□□ -1.39
PTPRM-203ENST00000400060 SPINK1P00995 79 aa6.38□□□□□ -1.39
PTPRM-203ENST00000400060 CSAG1Q6PB30 78 aa6.38□□□□□ -1.39
PTPRM-203ENST00000400060 SSBP3-AS1Q7Z2R9 100 aa6.37□□□□□ -1.39
PTPRM-203ENST00000400060 DMAC1Q96GE9 116 aa6.37□□□□□ -1.39
PTPRM-203ENST00000400060 MMP24-AS1A0A0U1RRL7 71 aa6.37□□□□□ -1.39
PTPRM-203ENST00000400060 DNAH10OSP0CZ25 163 aa6.37□□□□□ -1.39
PTPRM-203ENST00000400060 RANBP2P49792 3224 aaKnown RBP6.36□□□□□ -1.39
PTPRM-203ENST00000400060 SPRR1AP35321 89 aa6.36□□□□□ -1.39
PTPRM-203ENST00000400060 Q8NDZ9 215 aa6.36□□□□□ -1.39
PTPRM-203ENST00000400060 TNP2Q05952 138 aa6.36□□□□□ -1.39
PTPRM-203ENST00000400060 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
PTPRM-203ENST00000400060 IGKV2-30P06310 120 aa6.35□□□□□ -1.39
PTPRM-203ENST00000400060 CDH23Q9H251 3354 aa6.34□□□□□ -1.39
PTPRM-203ENST00000400060 CIRBP-AS1Q8TBR5 109 aa6.34□□□□□ -1.39
PTPRM-203ENST00000400060 EPG5Q9HCE0 2579 aa6.34□□□□□ -1.39
PTPRM-203ENST00000400060 PRR26Q8N8Z3 221 aa6.34□□□□□ -1.39
PTPRM-203ENST00000400060 NUPR2A6NF83 97 aa6.34□□□□□ -1.4
PTPRM-203ENST00000400060 SPATA8Q6RVD6 105 aa6.34□□□□□ -1.4
PTPRM-203ENST00000400060 C19orf73Q9NVV2 129 aa6.34□□□□□ -1.4
PTPRM-203ENST00000400060 KRTAP29-1A8MX34 341 aaPredicted RBP6.33□□□□□ -1.4
PTPRM-203ENST00000400060 FASNP49327 2511 aaKnown RBP6.33□□□□□ -1.4
PTPRM-203ENST00000400060 FAM168BA1KXE4 195 aa6.32□□□□□ -1.4
PTPRM-203ENST00000400060 Q6ZR54 194 aa6.32□□□□□ -1.4
PTPRM-203ENST00000400060 LINC00472Q9H8W2 130 aa6.3□□□□□ -1.4
PTPRM-203ENST00000400060 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
PTPRM-203ENST00000400060 SPRR1BP22528 89 aa6.29□□□□□ -1.4
PTPRM-203ENST00000400060 A0A0C4DFX4 3053 aa6.28□□□□□ -1.4
PTPRM-203ENST00000400060 UNC80Q8N2C7 3258 aa6.28□□□□□ -1.4
PTPRM-203ENST00000400060 REV3LO60673 3130 aa6.24□□□□□ -1.41
PTPRM-203ENST00000400060 SZT2Q5T011 3432 aa6.23□□□□□ -1.41
PTPRM-203ENST00000400060 LY6G6CO95867 125 aa6.22□□□□□ -1.41
PTPRM-203ENST00000400060 CHTF8P0CG12 524 aa6.22□□□□□ -1.41
PTPRM-203ENST00000400060 A0A0G2JQZ4 141 aa6.21□□□□□ -1.41
PTPRM-203ENST00000400060 A0A1W2PNN7 141 aa6.21□□□□□ -1.41
PTPRM-203ENST00000400060 XIRP2A4UGR9 3374 aa6.21□□□□□ -1.41
PTPRM-203ENST00000400060 KRTAP24-1Q3LI83 254 aa6.2□□□□□ -1.42
PTPRM-203ENST00000400060 IGLV5-52A0A0A0MRZ9 124 aa6.2□□□□□ -1.42
PTPRM-203ENST00000400060 KRTAP1-3Q8IUG1 177 aa6.2□□□□□ -1.42
PTPRM-203ENST00000400060 IGLV7-43P04211 117 aa6.2□□□□□ -1.42
PTPRM-203ENST00000400060 A8MU10 97 aa6.19□□□□□ -1.42
PTPRM-203ENST00000400060 PRUNE2Q8WUY3 3088 aa6.19□□□□□ -1.42
PTPRM-203ENST00000400060 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
PTPRM-203ENST00000400060 KRTAP4-16G5E9R7 235 aaPredicted RBP6.18□□□□□ -1.42
PTPRM-203ENST00000400060 F8P00451 2351 aa6.18□□□□□ -1.42
PTPRM-203ENST00000400060 A0A1B0GU33 70 aa6.17□□□□□ -1.42
PTPRM-203ENST00000400060 ZNF292O60281 2723 aa6.16□□□□□ -1.42
PTPRM-203ENST00000400060 EYSQ5T1H1 3165 aa6.16□□□□□ -1.42
PTPRM-203ENST00000400060 TRIOO75962 3097 aa6.16□□□□□ -1.42
PTPRM-203ENST00000400060 KRTAP10-3P60369 221 aa6.16□□□□□ -1.42
PTPRM-203ENST00000400060 PLAC8Q9NZF1 115 aa6.15□□□□□ -1.42
PTPRM-203ENST00000400060 KRTAP1-1Q07627 177 aa6.15□□□□□ -1.43
PTPRM-203ENST00000400060 KRTAP26-1Q6PEX3 210 aa6.15□□□□□ -1.43
PTPRM-203ENST00000400060 KRTAP16-1A8MUX0 517 aa6.14□□□□□ -1.43
PTPRM-203ENST00000400060 FLNAP21333 2647 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms