RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 ZFYVE26Q68DK2 2539 aa7.43□□□□□ -1.22
CACNA1C-208ENST00000399601 LRP4O75096 1905 aa7.42□□□□□ -1.22
CACNA1C-208ENST00000399601 PRR26Q8N8Z3 221 aa7.42□□□□□ -1.22
CACNA1C-208ENST00000399601 Q6ZSA8 131 aa7.41□□□□□ -1.22
CACNA1C-208ENST00000399601 IGHV3OR16-9A0A0B4J2B5 98 aa7.41□□□□□ -1.22
CACNA1C-208ENST00000399601 A0A087WTM6 91 aa7.41□□□□□ -1.22
CACNA1C-208ENST00000399601 PRAC1Q96KF2 57 aa7.41□□□□□ -1.22
CACNA1C-208ENST00000399601 EML5Q05BV3 1969 aa7.4□□□□□ -1.22
CACNA1C-208ENST00000399601 PLXNB1O43157 2135 aa7.4□□□□□ -1.23
CACNA1C-208ENST00000399601 MUC22E2RYF6 1773 aaPredicted RBP7.38□□□□□ -1.23
CACNA1C-208ENST00000399601 IGFL1Q6UW32 110 aa7.38□□□□□ -1.23
CACNA1C-208ENST00000399601 PRR15Q8IV56 129 aa7.38□□□□□ -1.23
CACNA1C-208ENST00000399601 A0A1B0GW54 56 aa7.37□□□□□ -1.23
CACNA1C-208ENST00000399601 LOC110117498A0A087WWA1 95 aa7.37□□□□□ -1.23
CACNA1C-208ENST00000399601 A0A1B0GVX0 72 aa7.37□□□□□ -1.23
CACNA1C-208ENST00000399601 SMCPP49901 116 aaPredicted RBP7.36□□□□□ -1.23
CACNA1C-208ENST00000399601 A0A096LNJ9 63 aa7.36□□□□□ -1.23
CACNA1C-208ENST00000399601 CHD8Q9HCK8 2581 aa7.36□□□□□ -1.23
CACNA1C-208ENST00000399601 LINC01546A6NGU7 62 aa7.36□□□□□ -1.23
CACNA1C-208ENST00000399601 C15orf56Q8N910 161 aa7.36□□□□□ -1.23
CACNA1C-208ENST00000399601 C9orf163Q8N9P6 203 aa7.35□□□□□ -1.23
CACNA1C-208ENST00000399601 CASC10Q5T4H9 136 aa7.35□□□□□ -1.23
CACNA1C-208ENST00000399601 WDR87Q6ZQQ6 2873 aa7.34□□□□□ -1.23
CACNA1C-208ENST00000399601 GVQW2A0A096LPI5 108 aaPredicted RBP7.33□□□□□ -1.24
CACNA1C-208ENST00000399601 BPTFQ12830 3046 aa7.32□□□□□ -1.24
CACNA1C-208ENST00000399601 CSAG1Q6PB30 78 aa7.32□□□□□ -1.24
CACNA1C-208ENST00000399601 MYO9AB2RTY4 2548 aa7.31□□□□□ -1.24
CACNA1C-208ENST00000399601 ZNF861PO60384 105 aa7.31□□□□□ -1.24
CACNA1C-208ENST00000399601 MKI67P46013 3256 aaKnown RBP7.31□□□□□ -1.24
CACNA1C-208ENST00000399601 IGLV7-46A0A075B6I9 117 aa7.31□□□□□ -1.24
CACNA1C-208ENST00000399601 LAMA3Q16787 3333 aa7.3□□□□□ -1.24
CACNA1C-208ENST00000399601 C2CD3Q4AC94 2353 aa7.3□□□□□ -1.24
CACNA1C-208ENST00000399601 COX8CQ7Z4L0 72 aa7.3□□□□□ -1.24
CACNA1C-208ENST00000399601 COL4A2P08572 1712 aa7.3□□□□□ -1.24
CACNA1C-208ENST00000399601 PIEZO2Q9H5I5 2752 aa7.3□□□□□ -1.24
CACNA1C-208ENST00000399601 C19orf73Q9NVV2 129 aa7.29□□□□□ -1.24
CACNA1C-208ENST00000399601 A0A1B0GU33 70 aa7.29□□□□□ -1.24
CACNA1C-208ENST00000399601 Q5VSD8 79 aa7.28□□□□□ -1.24
CACNA1C-208ENST00000399601 S4R3F8 94 aa7.28□□□□□ -1.24
CACNA1C-208ENST00000399601 IGLV7-43P04211 117 aa7.27□□□□□ -1.25
CACNA1C-208ENST00000399601 TLN1Q9Y490 2541 aaKnown RBP7.27□□□□□ -1.25
CACNA1C-208ENST00000399601 FN1P02751 2386 aaKnown RBP7.25□□□□□ -1.25
CACNA1C-208ENST00000399601 CPAMD8Q8IZJ3 1885 aa7.25□□□□□ -1.25
CACNA1C-208ENST00000399601 ABCA12Q86UK0 2595 aa7.25□□□□□ -1.25
CACNA1C-208ENST00000399601 HRES1P13985 223 aa7.25□□□□□ -1.25
CACNA1C-208ENST00000399601 KRTAP10-3P60369 221 aa7.24□□□□□ -1.25
CACNA1C-208ENST00000399601 TNP2Q05952 138 aa7.24□□□□□ -1.25
CACNA1C-208ENST00000399601 LITAFQ99732 161 aa7.21□□□□□ -1.25
CACNA1C-208ENST00000399601 DNAH14Q0VDD8 3507 aa7.21□□□□□ -1.26
CACNA1C-208ENST00000399601 C10orf142B7Z368 130 aa7.18□□□□□ -1.26
CACNA1C-208ENST00000399601 R4GN34 69 aa7.18□□□□□ -1.26
CACNA1C-208ENST00000399601 KLK9Q2XQG4 91 aa7.17□□□□□ -1.26
CACNA1C-208ENST00000399601 C20orf166-AS1Q96NR2 134 aa7.17□□□□□ -1.26
CACNA1C-208ENST00000399601 XIRP2A4UGR9 3374 aa7.16□□□□□ -1.26
CACNA1C-208ENST00000399601 COL27A1Q8IZC6 1860 aaPredicted RBP7.16□□□□□ -1.26
CACNA1C-208ENST00000399601 FASNP49327 2511 aaKnown RBP7.16□□□□□ -1.26
CACNA1C-208ENST00000399601 CDH23Q9H251 3354 aa7.15□□□□□ -1.26
CACNA1C-208ENST00000399601 Q8N377 158 aa7.15□□□□□ -1.27
CACNA1C-208ENST00000399601 LAMA2P24043 3122 aaKnown RBP7.14□□□□□ -1.27
CACNA1C-208ENST00000399601 F8P00451 2351 aa7.13□□□□□ -1.27
CACNA1C-208ENST00000399601 USP9XQ93008 2570 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-208ENST00000399601 H7BZZ5 65 aa7.12□□□□□ -1.27
CACNA1C-208ENST00000399601 UNC80Q8N2C7 3258 aa7.12□□□□□ -1.27
CACNA1C-208ENST00000399601 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
CACNA1C-208ENST00000399601 PTPRBP23467 1997 aa7.11□□□□□ -1.27
CACNA1C-208ENST00000399601 LINC00612Q8N6U2 182 aa7.11□□□□□ -1.27
CACNA1C-208ENST00000399601 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
CACNA1C-208ENST00000399601 ROMO1P60602 79 aa7.11□□□□□ -1.27
CACNA1C-208ENST00000399601 SZT2Q5T011 3432 aa7.1□□□□□ -1.27
CACNA1C-208ENST00000399601 Q8N9P0 234 aaPredicted RBP7.09□□□□□ -1.27
CACNA1C-208ENST00000399601 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.09□□□□□ -1.27
CACNA1C-208ENST00000399601 TLN2Q9Y4G6 2542 aa7.09□□□□□ -1.27
CACNA1C-208ENST00000399601 M0QZ58 72 aa7.09□□□□□ -1.27
CACNA1C-208ENST00000399601 HTTP42858 3142 aa7.08□□□□□ -1.28
CACNA1C-208ENST00000399601 LCE6AA0A183 80 aa7.08□□□□□ -1.28
CACNA1C-208ENST00000399601 KCNQ1DNQ9H478 68 aa7.08□□□□□ -1.28
CACNA1C-208ENST00000399601 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
CACNA1C-208ENST00000399601 FAM229BQ4G0N7 80 aa7.07□□□□□ -1.28
CACNA1C-208ENST00000399601 FP248Q71RG6 208 aaPredicted RBP7.06□□□□□ -1.28
CACNA1C-208ENST00000399601 SPRR4Q96PI1 79 aa7.05□□□□□ -1.28
CACNA1C-208ENST00000399601 MTORP42345 2549 aa7.05□□□□□ -1.28
CACNA1C-208ENST00000399601 A0A0C4DFX4 3053 aa7.04□□□□□ -1.28
CACNA1C-208ENST00000399601 POLQO75417 2590 aa7.04□□□□□ -1.28
CACNA1C-208ENST00000399601 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
CACNA1C-208ENST00000399601 A0A096LNT2 108 aa7.01□□□□□ -1.29
CACNA1C-208ENST00000399601 Q5XG85 94 aa7.01□□□□□ -1.29
CACNA1C-208ENST00000399601 CNBPP62633 177 aaKnown RBP7.01□□□□□ -1.29
CACNA1C-208ENST00000399601 KRTAP1-3Q8IUG1 177 aa7.01□□□□□ -1.29
CACNA1C-208ENST00000399601 OXTP01178 125 aa7□□□□□ -1.29
CACNA1C-208ENST00000399601 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
CACNA1C-208ENST00000399601 CHD7Q9P2D1 2997 aa7□□□□□ -1.29
CACNA1C-208ENST00000399601 SPANXA2-OT1Q8N9U9 137 aa6.99□□□□□ -1.29
CACNA1C-208ENST00000399601 EIF4EBP3O60516 100 aaPredicted RBP6.98□□□□□ -1.29
CACNA1C-208ENST00000399601 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
CACNA1C-208ENST00000399601 ANKRD17O75179 2603 aaKnown RBP6.98□□□□□ -1.29
CACNA1C-208ENST00000399601 KRTAP1-1Q07627 177 aa6.98□□□□□ -1.29
CACNA1C-208ENST00000399601 Q75L30 129 aa6.97□□□□□ -1.29
CACNA1C-208ENST00000399601 PRUNE2Q8WUY3 3088 aa6.96□□□□□ -1.29
CACNA1C-208ENST00000399601 A0A1W2PNM2 257 aa6.96□□□□□ -1.3
CACNA1C-208ENST00000399601 PRR34Q9NV39 138 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms