RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 CD164Q04900 197 aa6.31□□□□□ -1.4
ATL3-201ENST00000398868 LINC01554Q52M75 96 aa6.31□□□□□ -1.4
ATL3-201ENST00000398868 KRTAP10-3P60369 221 aa6.3□□□□□ -1.4
ATL3-201ENST00000398868 REV3LO60673 3130 aa6.3□□□□□ -1.4
ATL3-201ENST00000398868 WDFY4Q6ZS81 3184 aa6.3□□□□□ -1.4
ATL3-201ENST00000398868 ELOF1P60002 83 aaKnown RBP6.3□□□□□ -1.4
ATL3-201ENST00000398868 MIR22HGQ0VDD5 57 aa6.3□□□□□ -1.4
ATL3-201ENST00000398868 Q6ZRP5 223 aa6.3□□□□□ -1.4
ATL3-201ENST00000398868 Q8NAQ8 132 aa6.3□□□□□ -1.4
ATL3-201ENST00000398868 IGHV3OR16-9A0A0B4J2B5 98 aa6.3□□□□□ -1.4
ATL3-201ENST00000398868 VCANP13611 3396 aa6.29□□□□□ -1.4
ATL3-201ENST00000398868 LINC01546A6NGU7 62 aa6.29□□□□□ -1.4
ATL3-201ENST00000398868 KTN1-AS1Q86SY8 53 aa6.29□□□□□ -1.4
ATL3-201ENST00000398868 COX8CQ7Z4L0 72 aa6.29□□□□□ -1.4
ATL3-201ENST00000398868 CHD7Q9P2D1 2997 aa6.29□□□□□ -1.4
ATL3-201ENST00000398868 HECTD1Q9ULT8 2610 aa6.28□□□□□ -1.4
ATL3-201ENST00000398868 DSCR10P59022 87 aa6.27□□□□□ -1.41
ATL3-201ENST00000398868 C9orf129Q5T035 196 aaKnown RBP6.27□□□□□ -1.41
ATL3-201ENST00000398868 OBSCN-AS1Q96MR7 158 aa6.27□□□□□ -1.41
ATL3-201ENST00000398868 LOC110117498A0A087WWA1 95 aa6.27□□□□□ -1.41
ATL3-201ENST00000398868 CRIPTQ9P021 101 aa6.27□□□□□ -1.41
ATL3-201ENST00000398868 EPG5Q9HCE0 2579 aa6.27□□□□□ -1.41
ATL3-201ENST00000398868 A0A0D9SG42 100 aa6.27□□□□□ -1.41
ATL3-201ENST00000398868 WIPF1O43516 503 aa6.27□□□□□ -1.41
ATL3-201ENST00000398868 FLNBO75369 2602 aaKnown RBP6.27□□□□□ -1.41
ATL3-201ENST00000398868 IGLV6-57P01721 117 aa6.27□□□□□ -1.41
ATL3-201ENST00000398868 Q8NBF4 154 aa6.27□□□□□ -1.41
ATL3-201ENST00000398868 UQCR11O14957 56 aa6.26□□□□□ -1.41
ATL3-201ENST00000398868 COL6A3P12111 3177 aa6.26□□□□□ -1.41
ATL3-201ENST00000398868 BCE1O60756 84 aa6.25□□□□□ -1.41
ATL3-201ENST00000398868 LOC101927531A0A1B0GV80 90 aa6.25□□□□□ -1.41
ATL3-201ENST00000398868 MGAM2Q2M2H8 2515 aa6.24□□□□□ -1.41
ATL3-201ENST00000398868 LCA10Q71F78 164 aa6.24□□□□□ -1.41
ATL3-201ENST00000398868 Q6ZRX8 168 aa6.24□□□□□ -1.41
ATL3-201ENST00000398868 SPEGQ15772 3267 aa6.24□□□□□ -1.41
ATL3-201ENST00000398868 EIF4EBP3O60516 100 aaPredicted RBP6.24□□□□□ -1.41
ATL3-201ENST00000398868 C15orf56Q8N910 161 aa6.24□□□□□ -1.41
ATL3-201ENST00000398868 H3BS24 57 aa6.22□□□□□ -1.41
ATL3-201ENST00000398868 CYP4F30PQ9H0H9 118 aa6.22□□□□□ -1.41
ATL3-201ENST00000398868 CASC10Q5T4H9 136 aa6.21□□□□□ -1.41
ATL3-201ENST00000398868 H7BZZ5 65 aa6.21□□□□□ -1.41
ATL3-201ENST00000398868 H3BPC8 53 aa6.21□□□□□ -1.42
ATL3-201ENST00000398868 F8WDY8 70 aa6.21□□□□□ -1.42
ATL3-201ENST00000398868 C10orf142B7Z368 130 aa6.2□□□□□ -1.42
ATL3-201ENST00000398868 LITAFQ99732 161 aa6.2□□□□□ -1.42
ATL3-201ENST00000398868 A8MWP4 228 aa6.2□□□□□ -1.42
ATL3-201ENST00000398868 CFAP47Q6ZTR5 3102 aa6.2□□□□□ -1.42
ATL3-201ENST00000398868 HTTP42858 3142 aa6.19□□□□□ -1.42
ATL3-201ENST00000398868 MRPL34Q9BQ48 92 aaKnown RBP6.19□□□□□ -1.42
ATL3-201ENST00000398868 MGAQ8IWI9 3026 aa6.18□□□□□ -1.42
ATL3-201ENST00000398868 IGLV5-45A0A087WSX0 123 aa6.18□□□□□ -1.42
ATL3-201ENST00000398868 MYO15AQ9UKN7 3530 aa6.18□□□□□ -1.42
ATL3-201ENST00000398868 M0R2T5 61 aa6.18□□□□□ -1.42
ATL3-201ENST00000398868 ATRQ13535 2644 aa6.17□□□□□ -1.42
ATL3-201ENST00000398868 LINC00304Q8N9R0 145 aa6.17□□□□□ -1.42
ATL3-201ENST00000398868 EYSQ5T1H1 3165 aa6.17□□□□□ -1.42
ATL3-201ENST00000398868 USP34Q70CQ2 3546 aa6.17□□□□□ -1.42
ATL3-201ENST00000398868 SPTBN5Q9NRC6 3674 aaKnown RBP6.16□□□□□ -1.42
ATL3-201ENST00000398868 IGFL1Q6UW32 110 aa6.15□□□□□ -1.43
ATL3-201ENST00000398868 IGLV5-37A0A075B6J1 123 aa6.14□□□□□ -1.43
ATL3-201ENST00000398868 KLKP1Q107X0 134 aa6.14□□□□□ -1.43
ATL3-201ENST00000398868 A0A087WTM6 91 aa6.14□□□□□ -1.43
ATL3-201ENST00000398868 PRR15Q8IV56 129 aa6.14□□□□□ -1.43
ATL3-201ENST00000398868 RBM12B-AS1Q9P1G2 102 aa6.13□□□□□ -1.43
ATL3-201ENST00000398868 Q8N1X5 172 aa6.13□□□□□ -1.43
ATL3-201ENST00000398868 LINC00528Q8N1L1 170 aa6.13□□□□□ -1.43
ATL3-201ENST00000398868 ERC2-IT1O76042 136 aa6.12□□□□□ -1.43
ATL3-201ENST00000398868 PRAC1Q96KF2 57 aa6.12□□□□□ -1.43
ATL3-201ENST00000398868 LAMA1P25391 3075 aa6.12□□□□□ -1.43
ATL3-201ENST00000398868 GVQW2A0A096LPI5 108 aaPredicted RBP6.11□□□□□ -1.43
ATL3-201ENST00000398868 FAM229BQ4G0N7 80 aa6.11□□□□□ -1.43
ATL3-201ENST00000398868 C8orf17Q9NRJ1 99 aa6.11□□□□□ -1.43
ATL3-201ENST00000398868 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
ATL3-201ENST00000398868 TNP2Q05952 138 aa6.1□□□□□ -1.43
ATL3-201ENST00000398868 ZNF575Q86XF7 245 aa6.1□□□□□ -1.43
ATL3-201ENST00000398868 CR1P17927 2039 aa6.1□□□□□ -1.43
ATL3-201ENST00000398868 IGLV1-50A0A075B6I6 118 aa6.09□□□□□ -1.43
ATL3-201ENST00000398868 Q8N377 158 aa6.09□□□□□ -1.43
ATL3-201ENST00000398868 CSNK1G2-AS1Q8NCQ2 148 aa6.09□□□□□ -1.43
ATL3-201ENST00000398868 MAST4O15021 2626 aa6.09□□□□□ -1.43
ATL3-201ENST00000398868 PSORS1C2Q9UIG4 136 aa6.09□□□□□ -1.44
ATL3-201ENST00000398868 CFAP46Q8IYW2 2715 aa6.09□□□□□ -1.44
ATL3-201ENST00000398868 A0A1B0GW54 56 aa6.08□□□□□ -1.44
ATL3-201ENST00000398868 LUZP6Q538Z0 58 aa6.08□□□□□ -1.44
ATL3-201ENST00000398868 H3BNG1 76 aa6.08□□□□□ -1.44
ATL3-201ENST00000398868 AKAP13Q12802 2813 aa6.08□□□□□ -1.44
ATL3-201ENST00000398868 PLA2G2DQ9UNK4 145 aa6.07□□□□□ -1.44
ATL3-201ENST00000398868 ITPR3Q14573 2671 aa6.06□□□□□ -1.44
ATL3-201ENST00000398868 CENPEQ02224 2701 aa6.06□□□□□ -1.44
ATL3-201ENST00000398868 IGLV5-48A0A075B6I7 105 aa6.06□□□□□ -1.44
ATL3-201ENST00000398868 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
ATL3-201ENST00000398868 ZNF861PO60384 105 aa6.05□□□□□ -1.44
ATL3-201ENST00000398868 FRYQ5TBA9 3013 aa6.05□□□□□ -1.44
ATL3-201ENST00000398868 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
ATL3-201ENST00000398868 C9orf163Q8N9P6 203 aa6.04□□□□□ -1.44
ATL3-201ENST00000398868 CRYBG3Q68DQ2 2970 aa6.04□□□□□ -1.44
ATL3-201ENST00000398868 WDFY3Q8IZQ1 3526 aa6.04□□□□□ -1.44
ATL3-201ENST00000398868 GIG44P09565 113 aaPredicted RBP6.04□□□□□ -1.44
ATL3-201ENST00000398868 C19orf73Q9NVV2 129 aa6.03□□□□□ -1.44
ATL3-201ENST00000398868 FLNAP21333 2647 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms