RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SMIM6P0DI80 62 aa15.45■□□□□ 0.06
U2AF1-203ENST00000398137 LINC01600Q96MT4 127 aa15.45■□□□□ 0.06
U2AF1-203ENST00000398137 HIGD1BQ9P298 99 aa15.45■□□□□ 0.06
U2AF1-203ENST00000398137 OR13C6PQ8NH95 151 aa15.44■□□□□ 0.06
U2AF1-203ENST00000398137 UBE2AP49459 152 aa15.43■□□□□ 0.06
U2AF1-203ENST00000398137 FAM19A1Q7Z5A9 133 aa15.43■□□□□ 0.06
U2AF1-203ENST00000398137 LINC00518Q8N0U6 118 aa15.43■□□□□ 0.06
U2AF1-203ENST00000398137 LINC00337Q8N6G1 96 aa15.43■□□□□ 0.06
U2AF1-203ENST00000398137 ZNF861PO60384 105 aa15.41■□□□□ 0.06
U2AF1-203ENST00000398137 RPL28P46779 137 aaKnown RBP15.41■□□□□ 0.06
U2AF1-203ENST00000398137 PRLHP81277 87 aa15.41■□□□□ 0.06
U2AF1-203ENST00000398137 KRTAP13-1Q8IUC0 172 aa15.4■□□□□ 0.06
U2AF1-203ENST00000398137 DIRC1Q969H9 104 aa15.4■□□□□ 0.06
U2AF1-203ENST00000398137 TRAV23DV6A0A075B6W5 121 aa15.39■□□□□ 0.05
U2AF1-203ENST00000398137 A4D1N5 150 aa15.39■□□□□ 0.05
U2AF1-203ENST00000398137 SPRR1AP35321 89 aa15.38■□□□□ 0.05
U2AF1-203ENST00000398137 H0Y9J4 135 aa15.37■□□□□ 0.05
U2AF1-203ENST00000398137 UQCR10Q9UDW1 63 aa15.37■□□□□ 0.05
U2AF1-203ENST00000398137 ETDCA0A1B0GVM5 59 aa15.36■□□□□ 0.05
U2AF1-203ENST00000398137 KRTAP10-8P60410 259 aa15.36■□□□□ 0.05
U2AF1-203ENST00000398137 A6NDN8 102 aa15.35■□□□□ 0.05
U2AF1-203ENST00000398137 KRTAP4-16G5E9R7 235 aaPredicted RBP15.35■□□□□ 0.05
U2AF1-203ENST00000398137 C12orf57Q99622 126 aa15.34■□□□□ 0.05
U2AF1-203ENST00000398137 PRO1933Q9H354 126 aa15.34■□□□□ 0.05
U2AF1-203ENST00000398137 ZNF73O43830 326 aaPredicted RBP15.33■□□□□ 0.04
U2AF1-203ENST00000398137 CBY1Q9Y3M2 126 aa15.33■□□□□ 0.04
U2AF1-203ENST00000398137 TAL2Q16559 108 aa15.32■□□□□ 0.04
U2AF1-203ENST00000398137 TRAV13-2A0A0B4J235 113 aa15.31■□□□□ 0.04
U2AF1-203ENST00000398137 B5MCH6 92 aa15.29■□□□□ 0.04
U2AF1-203ENST00000398137 CEND1Q8N111 149 aa15.29■□□□□ 0.04
U2AF1-203ENST00000398137 HIGD2AQ9BW72 106 aa15.29■□□□□ 0.04
U2AF1-203ENST00000398137 LRP2P98164 4655 aa15.28■□□□□ 0.04
U2AF1-203ENST00000398137 HSD52Q0P140 79 aa15.27■□□□□ 0.04
U2AF1-203ENST00000398137 Q6ZRX8 168 aa15.26■□□□□ 0.03
U2AF1-203ENST00000398137 C6orf99Q4VX62 202 aa15.25■□□□□ 0.03
U2AF1-203ENST00000398137 RPL13AP40429 203 aaKnown RBP15.24■□□□□ 0.03
U2AF1-203ENST00000398137 FXYD2P54710 66 aa15.24■□□□□ 0.03
U2AF1-203ENST00000398137 KRTAP1-4P0C5Y4 121 aa15.22■□□□□ 0.03
U2AF1-203ENST00000398137 CFC1BP0CG36 223 aa15.22■□□□□ 0.03
U2AF1-203ENST00000398137 CFC1P0CG37 223 aa15.22■□□□□ 0.03
U2AF1-203ENST00000398137 HINT1P49773 126 aaPredicted RBP15.22■□□□□ 0.03
U2AF1-203ENST00000398137 SMIM11BQ8TCY0 68 aa15.22■□□□□ 0.03
U2AF1-203ENST00000398137 SMCR5Q8TEV8 140 aa15.22■□□□□ 0.03
U2AF1-203ENST00000398137 Q9BRP9 147 aa15.21■□□□□ 0.03
U2AF1-203ENST00000398137 TMEM238LA0A1B0GVL6 79 aa15.2■□□□□ 0.02
U2AF1-203ENST00000398137 A6NJY4 79 aa15.2■□□□□ 0.02
U2AF1-203ENST00000398137 RAB37Q96AX2 223 aa15.2■□□□□ 0.02
U2AF1-203ENST00000398137 A0A0B4J2C4 111 aa15.18■□□□□ 0.02
U2AF1-203ENST00000398137 COX7BP24311 80 aa15.18■□□□□ 0.02
U2AF1-203ENST00000398137 ELOF1P60002 83 aaKnown RBP15.17■□□□□ 0.02
U2AF1-203ENST00000398137 ERC2-IT1O76042 136 aa15.16■□□□□ 0.02
U2AF1-203ENST00000398137 H7C2G1 150 aa15.15■□□□□ 0.02
U2AF1-203ENST00000398137 TSTD3H0UI37 97 aa15.14■□□□□ 0.01
U2AF1-203ENST00000398137 ANAPC11Q9NYG5 84 aa15.14■□□□□ 0.01
U2AF1-203ENST00000398137 TRBV7-6A0A0J9YX20 115 aa15.13■□□□□ 0.01
U2AF1-203ENST00000398137 A0A1B0GWB2 263 aa15.12■□□□□ 0.01
U2AF1-203ENST00000398137 PRR26Q8N8Z3 221 aa15.12■□□□□ 0.01
U2AF1-203ENST00000398137 SPRR4Q96PI1 79 aa15.12■□□□□ 0.01
U2AF1-203ENST00000398137 NHP2Q9NX24 153 aaKnown RBP15.12■□□□□ 0.01
U2AF1-203ENST00000398137 ZNF706Q9Y5V0 76 aaPredicted RBP15.11■□□□□ 0.01
U2AF1-203ENST00000398137 CTAG1AP78358 180 aa15.1■□□□□ 0.01
U2AF1-203ENST00000398137 K7ERJ3 54 aa15.09■□□□□ 0.01
U2AF1-203ENST00000398137 BVES-AS1Q5T3Y7 98 aa15.09■□□□□ 0.01
U2AF1-203ENST00000398137 DHRS4-AS1Q9P1J3 65 aa15.09■□□□□ 0.01
U2AF1-203ENST00000398137 PRO1854Q9UHT4 67 aa15.09■□□□□ 0.01
U2AF1-203ENST00000398137 Q1RN00 199 aa15.07■□□□□ 0
U2AF1-203ENST00000398137 A0A087X002 238 aa15.06■□□□□ 0
U2AF1-203ENST00000398137 VAMP3Q15836 100 aa15.06■□□□□ 0
U2AF1-203ENST00000398137 ST20-AS1Q8NBB2 130 aa15.04■□□□□ -0
U2AF1-203ENST00000398137 CRYGAP11844 174 aa15.03■□□□□ -0
U2AF1-203ENST00000398137 FAM229BQ4G0N7 80 aa15.03■□□□□ -0
U2AF1-203ENST00000398137 GAGE2AQ6NT46 116 aa15.03■□□□□ -0
U2AF1-203ENST00000398137 LPAP08519 4548 aa15.03■□□□□ -0
U2AF1-203ENST00000398137 M0R143 59 aa15.01□□□□□ -0.01
U2AF1-203ENST00000398137 RNF213Q63HN8 5207 aa15.01□□□□□ -0.01
U2AF1-203ENST00000398137 LINC00483Q53H64 154 aa14.99□□□□□ -0.01
U2AF1-203ENST00000398137 KRTAP13-2Q52LG2 175 aa14.98□□□□□ -0.01
U2AF1-203ENST00000398137 LINC00575Q6W349 94 aa14.98□□□□□ -0.01
U2AF1-203ENST00000398137 SLC25A20O43772 301 aa14.96□□□□□ -0.01
U2AF1-203ENST00000398137 TSPAN13O95857 204 aa14.94□□□□□ -0.02
U2AF1-203ENST00000398137 C3orf22Q8N5N4 141 aa14.94□□□□□ -0.02
U2AF1-203ENST00000398137 TYMSOSQ8TAI1 123 aa14.94□□□□□ -0.02
U2AF1-203ENST00000398137 TRIAP1O43715 76 aa14.93□□□□□ -0.02
U2AF1-203ENST00000398137 hADV29S1A0JD25 119 aa14.91□□□□□ -0.02
U2AF1-203ENST00000398137 DEFB105AQ8NG35 78 aa14.91□□□□□ -0.02
U2AF1-203ENST00000398137 PSMB2P49721 201 aa14.9□□□□□ -0.02
U2AF1-203ENST00000398137 H0YGX0 51 aa14.89□□□□□ -0.03
U2AF1-203ENST00000398137 BATFQ16520 125 aa14.89□□□□□ -0.03
U2AF1-203ENST00000398137 SPRR1BP22528 89 aa14.88□□□□□ -0.03
U2AF1-203ENST00000398137 IGLV9-49A0A0B4J1Y8 123 aa14.87□□□□□ -0.03
U2AF1-203ENST00000398137 FAM218AQ96MZ4 157 aa14.87□□□□□ -0.03
U2AF1-203ENST00000398137 LINC01547P58512 204 aaPredicted RBP14.86□□□□□ -0.03
U2AF1-203ENST00000398137 Q6ZQY7 126 aa14.86□□□□□ -0.03
U2AF1-203ENST00000398137 IGLV5-48A0A075B6I7 105 aa14.85□□□□□ -0.03
U2AF1-203ENST00000398137 TEX49A0A1B0GTD5 131 aa14.84□□□□□ -0.03
U2AF1-203ENST00000398137 MOBPQ13875 183 aa14.84□□□□□ -0.03
U2AF1-203ENST00000398137 CLEC2BQ92478 149 aa14.82□□□□□ -0.04
U2AF1-203ENST00000398137 C9orf153Q5TBE3 101 aa14.81□□□□□ -0.04
U2AF1-203ENST00000398137 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.81□□□□□ -0.04
U2AF1-203ENST00000398137 COX6CP09669 75 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms