RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 ERC2-IT1O76042 136 aa9.71□□□□□ -0.86
APTR-201ENST00000398043 AKR1D1P51857 326 aa9.71□□□□□ -0.86
APTR-201ENST00000398043 PCP2Q8IVA1 136 aa9.71□□□□□ -0.86
APTR-201ENST00000398043 C3orf22Q8N5N4 141 aa9.71□□□□□ -0.86
APTR-201ENST00000398043 SPANXDQ9BXN6 97 aa9.71□□□□□ -0.86
APTR-201ENST00000398043 TRAV23DV6A0A075B6W5 121 aa9.7□□□□□ -0.86
APTR-201ENST00000398043 TSPAN13O95857 204 aa9.7□□□□□ -0.86
APTR-201ENST00000398043 ZNF706Q9Y5V0 76 aaPredicted RBP9.7□□□□□ -0.86
APTR-201ENST00000398043 LINC00483Q53H64 154 aa9.69□□□□□ -0.86
APTR-201ENST00000398043 PPDPFQ9H3Y8 114 aa9.69□□□□□ -0.86
APTR-201ENST00000398043 LPAP08519 4548 aa9.68□□□□□ -0.86
APTR-201ENST00000398043 ZNF73O43830 326 aaPredicted RBP9.68□□□□□ -0.86
APTR-201ENST00000398043 S100A2P29034 98 aa9.68□□□□□ -0.86
APTR-201ENST00000398043 SNRPEP62304 92 aaKnown RBP9.68□□□□□ -0.86
APTR-201ENST00000398043 LINC00304Q8N9R0 145 aa9.68□□□□□ -0.86
APTR-201ENST00000398043 SCGB1D4Q6XE38 83 aa9.67□□□□□ -0.86
APTR-201ENST00000398043 S100A6P06703 90 aa9.66□□□□□ -0.86
APTR-201ENST00000398043 CTAG1AP78358 180 aa9.66□□□□□ -0.86
APTR-201ENST00000398043 C5orf52A6NGY3 159 aa9.65□□□□□ -0.86
APTR-201ENST00000398043 IFITM1P13164 125 aa9.64□□□□□ -0.87
APTR-201ENST00000398043 Q6ZVH6 145 aa9.64□□□□□ -0.87
APTR-201ENST00000398043 LINC00518Q8N0U6 118 aa9.64□□□□□ -0.87
APTR-201ENST00000398043 PRR4Q16378 134 aa9.63□□□□□ -0.87
APTR-201ENST00000398043 CBY1Q9Y3M2 126 aa9.63□□□□□ -0.87
APTR-201ENST00000398043 JOSD1Q15040 202 aaPredicted RBP9.62□□□□□ -0.87
APTR-201ENST00000398043 GAGE2AQ6NT46 116 aa9.62□□□□□ -0.87
APTR-201ENST00000398043 OR13C6PQ8NH95 151 aa9.62□□□□□ -0.87
APTR-201ENST00000398043 MUSTN1Q8IVN3 82 aa9.61□□□□□ -0.87
APTR-201ENST00000398043 COPS9Q8WXC6 57 aa9.59□□□□□ -0.87
APTR-201ENST00000398043 SPAG11AQ6PDA7 123 aa9.58□□□□□ -0.88
APTR-201ENST00000398043 ST20-AS1Q8NBB2 130 aa9.58□□□□□ -0.88
APTR-201ENST00000398043 Q8NBF4 154 aa9.58□□□□□ -0.88
APTR-201ENST00000398043 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
APTR-201ENST00000398043 ELOF1P60002 83 aaKnown RBP9.57□□□□□ -0.88
APTR-201ENST00000398043 C6orf99Q4VX62 202 aa9.57□□□□□ -0.88
APTR-201ENST00000398043 RETNLBQ9BQ08 111 aa9.57□□□□□ -0.88
APTR-201ENST00000398043 HSBP1L1C9JCN9 74 aa9.56□□□□□ -0.88
APTR-201ENST00000398043 RNF213Q63HN8 5207 aa9.55□□□□□ -0.88
APTR-201ENST00000398043 TRBV7-6A0A0J9YX20 115 aa9.54□□□□□ -0.88
APTR-201ENST00000398043 SCGB1D1O95968 90 aa9.54□□□□□ -0.88
APTR-201ENST00000398043 SPRR1BP22528 89 aa9.54□□□□□ -0.88
APTR-201ENST00000398043 MOBPQ13875 183 aa9.54□□□□□ -0.88
APTR-201ENST00000398043 SSBP3-AS1Q7Z2R9 100 aa9.54□□□□□ -0.88
APTR-201ENST00000398043 DHRS4-AS1Q9P1J3 65 aa9.54□□□□□ -0.88
APTR-201ENST00000398043 IGLV9-49A0A0B4J1Y8 123 aa9.53□□□□□ -0.88
APTR-201ENST00000398043 COX7BP24311 80 aa9.53□□□□□ -0.88
APTR-201ENST00000398043 A6NDN8 102 aa9.51□□□□□ -0.89
APTR-201ENST00000398043 SPINK1P00995 79 aa9.51□□□□□ -0.89
APTR-201ENST00000398043 COX8AP10176 69 aa9.5□□□□□ -0.89
APTR-201ENST00000398043 TRAV13-2A0A0B4J235 113 aa9.49□□□□□ -0.89
APTR-201ENST00000398043 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
APTR-201ENST00000398043 SMIM11BQ8TCY0 68 aa9.49□□□□□ -0.89
APTR-201ENST00000398043 A0A1B0GWB2 263 aa9.48□□□□□ -0.89
APTR-201ENST00000398043 A4D1N5 150 aa9.48□□□□□ -0.89
APTR-201ENST00000398043 DLEU1O43261 78 aa9.48□□□□□ -0.89
APTR-201ENST00000398043 RPS29P62273 56 aaKnown RBP9.48□□□□□ -0.89
APTR-201ENST00000398043 IGLV7-46A0A075B6I9 117 aa9.47□□□□□ -0.89
APTR-201ENST00000398043 TPRXLQ17RH7 258 aa9.47□□□□□ -0.89
APTR-201ENST00000398043 LINC01547P58512 204 aaPredicted RBP9.45□□□□□ -0.9
APTR-201ENST00000398043 C9orf153Q5TBE3 101 aa9.44□□□□□ -0.9
APTR-201ENST00000398043 FP248Q71RG6 208 aaPredicted RBP9.44□□□□□ -0.9
APTR-201ENST00000398043 Q8N377 158 aa9.44□□□□□ -0.9
APTR-201ENST00000398043 IGLV5-48A0A075B6I7 105 aa9.43□□□□□ -0.9
APTR-201ENST00000398043 SLC25A34Q6PIV7 304 aa9.42□□□□□ -0.9
APTR-201ENST00000398043 SMIM29Q86T20 159 aa9.42□□□□□ -0.9
APTR-201ENST00000398043 C14orf144Q96I85 54 aa9.42□□□□□ -0.9
APTR-201ENST00000398043 TEX49A0A1B0GTD5 131 aa9.41□□□□□ -0.9
APTR-201ENST00000398043 SPATA45Q537H7 98 aa9.41□□□□□ -0.9
APTR-201ENST00000398043 PAM16Q9Y3D7 125 aa9.41□□□□□ -0.9
APTR-201ENST00000398043 TAL2Q16559 108 aa9.4□□□□□ -0.9
APTR-201ENST00000398043 HIST1H4GQ99525 98 aa9.4□□□□□ -0.9
APTR-201ENST00000398043 HIGD1BQ9P298 99 aa9.4□□□□□ -0.9
APTR-201ENST00000398043 LAMTOR3Q9UHA4 124 aa9.4□□□□□ -0.9
APTR-201ENST00000398043 C2orf91Q6ZV80 131 aa9.39□□□□□ -0.91
APTR-201ENST00000398043 DEFB105AQ8NG35 78 aa9.39□□□□□ -0.91
APTR-201ENST00000398043 Q1RN00 199 aa9.38□□□□□ -0.91
APTR-201ENST00000398043 KRTAP13-3Q3SY46 172 aa9.38□□□□□ -0.91
APTR-201ENST00000398043 VAMP8Q9BV40 100 aa9.38□□□□□ -0.91
APTR-201ENST00000398043 SLC25A20O43772 301 aa9.37□□□□□ -0.91
APTR-201ENST00000398043 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
APTR-201ENST00000398043 C12orf57Q99622 126 aa9.37□□□□□ -0.91
APTR-201ENST00000398043 NHP2Q9NX24 153 aaKnown RBP9.36□□□□□ -0.91
APTR-201ENST00000398043 CFC1BP0CG36 223 aa9.35□□□□□ -0.91
APTR-201ENST00000398043 CFC1P0CG37 223 aa9.35□□□□□ -0.91
APTR-201ENST00000398043 PYY3Q5JQD4 70 aa9.35□□□□□ -0.91
APTR-201ENST00000398043 CDIP1Q9H305 208 aa9.35□□□□□ -0.91
APTR-201ENST00000398043 VAMP3Q15836 100 aa9.34□□□□□ -0.91
APTR-201ENST00000398043 CD164Q04900 197 aa9.32□□□□□ -0.92
APTR-201ENST00000398043 PRO1933Q9H354 126 aa9.32□□□□□ -0.92
APTR-201ENST00000398043 hADV29S1A0JD25 119 aa9.31□□□□□ -0.92
APTR-201ENST00000398043 A0A0B4J2C4 111 aa9.3□□□□□ -0.92
APTR-201ENST00000398043 HRCT1Q6UXD1 115 aa9.3□□□□□ -0.92
APTR-201ENST00000398043 MUC2Q02817 5179 aa9.3□□□□□ -0.92
APTR-201ENST00000398043 A0A0G2JQZ4 141 aa9.29□□□□□ -0.92
APTR-201ENST00000398043 Q6ZQY7 126 aa9.29□□□□□ -0.92
APTR-201ENST00000398043 BVES-AS1Q5T3Y7 98 aa9.28□□□□□ -0.92
APTR-201ENST00000398043 CEND1Q8N111 149 aa9.28□□□□□ -0.92
APTR-201ENST00000398043 Q5XG85 94 aa9.27□□□□□ -0.93
APTR-201ENST00000398043 LIMD2Q9BT23 127 aa9.27□□□□□ -0.93
APTR-201ENST00000398043 TMA7Q9Y2S6 64 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms