RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TRBV7-6A0A0J9YX20 115 aa12.24□□□□□ -0.45
PDLIM2-205ENST00000397761 PRYO14603 147 aa12.24□□□□□ -0.45
PDLIM2-205ENST00000397761 Q6ZSA8 131 aa12.24□□□□□ -0.45
PDLIM2-205ENST00000397761 GTF2H5Q6ZYL4 71 aa12.24□□□□□ -0.45
PDLIM2-205ENST00000397761 RPL37AP8A6NKH3 93 aa12.23□□□□□ -0.45
PDLIM2-205ENST00000397761 SPRR1AP35321 89 aa12.22□□□□□ -0.45
PDLIM2-205ENST00000397761 KRTAP10-1P60331 282 aa12.22□□□□□ -0.45
PDLIM2-205ENST00000397761 UBE2V1Q13404 147 aa12.22□□□□□ -0.45
PDLIM2-205ENST00000397761 CLEC2BQ92478 149 aa12.22□□□□□ -0.45
PDLIM2-205ENST00000397761 DIRC1Q969H9 104 aa12.22□□□□□ -0.45
PDLIM2-205ENST00000397761 LST1O00453 97 aa12.21□□□□□ -0.45
PDLIM2-205ENST00000397761 PHF5AQ7RTV0 110 aaKnown RBP12.21□□□□□ -0.45
PDLIM2-205ENST00000397761 KRTAP4-16G5E9R7 235 aaPredicted RBP12.21□□□□□ -0.46
PDLIM2-205ENST00000397761 DPH3Q96FX2 82 aa12.21□□□□□ -0.46
PDLIM2-205ENST00000397761 FAM218AQ96MZ4 157 aa12.21□□□□□ -0.46
PDLIM2-205ENST00000397761 ATXN8Q156A1 80 aa12.2□□□□□ -0.46
PDLIM2-205ENST00000397761 FAM30AQ9NZY2 134 aa12.19□□□□□ -0.46
PDLIM2-205ENST00000397761 H3BMG7 143 aa12.18□□□□□ -0.46
PDLIM2-205ENST00000397761 ELOF1P60002 83 aaKnown RBP12.18□□□□□ -0.46
PDLIM2-205ENST00000397761 DNAH8Q96JB1 4490 aa12.17□□□□□ -0.46
PDLIM2-205ENST00000397761 KRTAP11-1Q8IUC1 163 aa12.17□□□□□ -0.46
PDLIM2-205ENST00000397761 TRACP01848 142 aa12.16□□□□□ -0.46
PDLIM2-205ENST00000397761 A0A1B0GX51 115 aa12.15□□□□□ -0.46
PDLIM2-205ENST00000397761 COX7BP24311 80 aa12.15□□□□□ -0.46
PDLIM2-205ENST00000397761 REG3GQ6UW15 175 aa12.15□□□□□ -0.46
PDLIM2-205ENST00000397761 LINC00528Q8N1L1 170 aa12.15□□□□□ -0.46
PDLIM2-205ENST00000397761 LINC00575Q6W349 94 aa12.14□□□□□ -0.47
PDLIM2-205ENST00000397761 UBE2BP63146 152 aa12.14□□□□□ -0.47
PDLIM2-205ENST00000397761 PKHD1P08F94 4074 aa12.13□□□□□ -0.47
PDLIM2-205ENST00000397761 PRO0461Q9UI25 63 aa12.13□□□□□ -0.47
PDLIM2-205ENST00000397761 B5MCH6 92 aa12.12□□□□□ -0.47
PDLIM2-205ENST00000397761 Q6ZRX8 168 aa12.12□□□□□ -0.47
PDLIM2-205ENST00000397761 CIRBP-AS1Q8TBR5 109 aa12.12□□□□□ -0.47
PDLIM2-205ENST00000397761 SCXQ7RTU7 201 aa12.1□□□□□ -0.47
PDLIM2-205ENST00000397761 ETDCA0A1B0GVM5 59 aa12.09□□□□□ -0.47
PDLIM2-205ENST00000397761 INAFM2P0DMQ5 153 aa12.08□□□□□ -0.47
PDLIM2-205ENST00000397761 LINC01600Q96MT4 127 aa12.08□□□□□ -0.47
PDLIM2-205ENST00000397761 C9JAW5 83 aa12.08□□□□□ -0.48
PDLIM2-205ENST00000397761 hADV29S1A0JD25 119 aa12.07□□□□□ -0.48
PDLIM2-205ENST00000397761 F8W1H4 67 aa12.07□□□□□ -0.48
PDLIM2-205ENST00000397761 H0Y9J4 135 aa12.06□□□□□ -0.48
PDLIM2-205ENST00000397761 SLC25A20O43772 301 aa12.06□□□□□ -0.48
PDLIM2-205ENST00000397761 Q9BRP9 147 aa12.06□□□□□ -0.48
PDLIM2-205ENST00000397761 SNCGO76070 127 aa12.05□□□□□ -0.48
PDLIM2-205ENST00000397761 DNAL4O96015 105 aa12.05□□□□□ -0.48
PDLIM2-205ENST00000397761 SMCPP49901 116 aaPredicted RBP12.05□□□□□ -0.48
PDLIM2-205ENST00000397761 DHRS4-AS1Q9P1J3 65 aa12.05□□□□□ -0.48
PDLIM2-205ENST00000397761 BCE1O60756 84 aa12.04□□□□□ -0.48
PDLIM2-205ENST00000397761 MTURNQ8N3F0 131 aa12.04□□□□□ -0.48
PDLIM2-205ENST00000397761 H3BT86 120 aa12.02□□□□□ -0.48
PDLIM2-205ENST00000397761 FAM19A1Q7Z5A9 133 aa12.02□□□□□ -0.48
PDLIM2-205ENST00000397761 KRTAP13-1Q8IUC0 172 aa12.02□□□□□ -0.48
PDLIM2-205ENST00000397761 PSORS1C2Q9UIG4 136 aa12.02□□□□□ -0.48
PDLIM2-205ENST00000397761 KIAA1109Q2LD37 5005 aa12.02□□□□□ -0.49
PDLIM2-205ENST00000397761 DYNC1H1Q14204 4646 aaKnown RBP12.02□□□□□ -0.49
PDLIM2-205ENST00000397761 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.02□□□□□ -0.49
PDLIM2-205ENST00000397761 HERC2O95714 4834 aa12.01□□□□□ -0.49
PDLIM2-205ENST00000397761 LRP1BQ9NZR2 4599 aa12.01□□□□□ -0.49
PDLIM2-205ENST00000397761 SMCR5Q8TEV8 140 aa12.01□□□□□ -0.49
PDLIM2-205ENST00000397761 PRLHP81277 87 aa12□□□□□ -0.49
PDLIM2-205ENST00000397761 ANKRD29Q8N6D5 301 aa12□□□□□ -0.49
PDLIM2-205ENST00000397761 ORMDL1Q9P0S3 153 aa12□□□□□ -0.49
PDLIM2-205ENST00000397761 BAALC-AS2P0C853 105 aa11.99□□□□□ -0.49
PDLIM2-205ENST00000397761 Q6ZQY7 126 aa11.99□□□□□ -0.49
PDLIM2-205ENST00000397761 SRRM2Q9UQ35 2752 aaKnown RBP11.97□□□□□ -0.49
PDLIM2-205ENST00000397761 HAMPP81172 84 aa11.97□□□□□ -0.49
PDLIM2-205ENST00000397761 OCIAD2Q56VL3 154 aa11.97□□□□□ -0.49
PDLIM2-205ENST00000397761 XGP55808 180 aa11.96□□□□□ -0.49
PDLIM2-205ENST00000397761 ERC2-IT1O76042 136 aa11.95□□□□□ -0.5
PDLIM2-205ENST00000397761 H3BQ85 93 aa11.95□□□□□ -0.5
PDLIM2-205ENST00000397761 UBE2AP49459 152 aa11.95□□□□□ -0.5
PDLIM2-205ENST00000397761 C1orf137Q5JT78 98 aa11.94□□□□□ -0.5
PDLIM2-205ENST00000397761 IGLV5-48A0A075B6I7 105 aa11.92□□□□□ -0.5
PDLIM2-205ENST00000397761 TMEM256-PLSCR3K7ERE1 68 aa11.92□□□□□ -0.5
PDLIM2-205ENST00000397761 GHRHP01286 108 aa11.92□□□□□ -0.5
PDLIM2-205ENST00000397761 LINC01547P58512 204 aaPredicted RBP11.91□□□□□ -0.5
PDLIM2-205ENST00000397761 ETDBQ3ZM63 59 aa11.91□□□□□ -0.5
PDLIM2-205ENST00000397761 TEN1Q86WV5 123 aa11.91□□□□□ -0.5
PDLIM2-205ENST00000397761 HIGD2AQ9BW72 106 aa11.91□□□□□ -0.5
PDLIM2-205ENST00000397761 PPDPFLQ8WWR9 84 aa11.9□□□□□ -0.5
PDLIM2-205ENST00000397761 ZNF861PO60384 105 aa11.89□□□□□ -0.51
PDLIM2-205ENST00000397761 IGLV7-43P04211 117 aa11.89□□□□□ -0.51
PDLIM2-205ENST00000397761 ST20-AS1Q8NBB2 130 aa11.89□□□□□ -0.51
PDLIM2-205ENST00000397761 RYR1P21817 5038 aa11.87□□□□□ -0.51
PDLIM2-205ENST00000397761 Q8N377 158 aa11.87□□□□□ -0.51
PDLIM2-205ENST00000397761 APOBP04114 4563 aaKnown RBP11.86□□□□□ -0.51
PDLIM2-205ENST00000397761 OBSCN-AS1Q96MR7 158 aa11.86□□□□□ -0.51
PDLIM2-205ENST00000397761 TEX49A0A1B0GTD5 131 aa11.83□□□□□ -0.52
PDLIM2-205ENST00000397761 SPRR1BP22528 89 aa11.83□□□□□ -0.52
PDLIM2-205ENST00000397761 DEFB105AQ8NG35 78 aa11.82□□□□□ -0.52
PDLIM2-205ENST00000397761 CDK2AP2O75956 126 aa11.81□□□□□ -0.52
PDLIM2-205ENST00000397761 VPS13BQ7Z7G8 4022 aa11.8□□□□□ -0.52
PDLIM2-205ENST00000397761 NDUFV3P56181 108 aaKnown RBP11.8□□□□□ -0.52
PDLIM2-205ENST00000397761 JMJD7-PLA2G4BH0Y9G9 81 aa11.79□□□□□ -0.52
PDLIM2-205ENST00000397761 SMIM29Q86T20 159 aa11.78□□□□□ -0.52
PDLIM2-205ENST00000397761 SPRR4Q96PI1 79 aa11.78□□□□□ -0.52
PDLIM2-205ENST00000397761 PCLOQ9Y6V0 5065 aa11.78□□□□□ -0.52
PDLIM2-205ENST00000397761 LAMTOR3Q9UHA4 124 aa11.77□□□□□ -0.52
PDLIM2-205ENST00000397761 RPL37AP61513 92 aaKnown RBP11.76□□□□□ -0.53
PDLIM2-205ENST00000397761 LINC00483Q53H64 154 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms