RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TENM2Q9NT68 2774 aa6.88□□□□□ -1.31
CPSF1P1-201ENST00000397477 RMI2Q96E14 147 aa6.88□□□□□ -1.31
CPSF1P1-201ENST00000397477 K7EIL1 84 aa6.87□□□□□ -1.31
CPSF1P1-201ENST00000397477 C20orf197Q8N268 126 aa6.87□□□□□ -1.31
CPSF1P1-201ENST00000397477 HIGD2AQ9BW72 106 aa6.87□□□□□ -1.31
CPSF1P1-201ENST00000397477 MUC7Q8TAX7 377 aa6.87□□□□□ -1.31
CPSF1P1-201ENST00000397477 NREPQ16612 68 aa6.87□□□□□ -1.31
CPSF1P1-201ENST00000397477 C2orf48Q96LS8 159 aa6.87□□□□□ -1.31
CPSF1P1-201ENST00000397477 GVQW2A0A096LPI5 108 aaPredicted RBP6.86□□□□□ -1.31
CPSF1P1-201ENST00000397477 A0A0U1RQV1 116 aa6.86□□□□□ -1.31
CPSF1P1-201ENST00000397477 H3BNG1 76 aa6.86□□□□□ -1.31
CPSF1P1-201ENST00000397477 Q6ZQT0 140 aa6.86□□□□□ -1.31
CPSF1P1-201ENST00000397477 Q6ZVQ6 151 aa6.86□□□□□ -1.31
CPSF1P1-201ENST00000397477 A0A096LNI7 61 aa6.86□□□□□ -1.31
CPSF1P1-201ENST00000397477 WIPF1O43516 503 aa6.85□□□□□ -1.31
CPSF1P1-201ENST00000397477 ELOF1P60002 83 aaKnown RBP6.85□□□□□ -1.31
CPSF1P1-201ENST00000397477 TMEM258P61165 79 aa6.84□□□□□ -1.31
CPSF1P1-201ENST00000397477 ST20-AS1Q8NBB2 130 aa6.84□□□□□ -1.31
CPSF1P1-201ENST00000397477 OBSCN-AS1Q96MR7 158 aa6.84□□□□□ -1.31
CPSF1P1-201ENST00000397477 LINC01547P58512 204 aaPredicted RBP6.84□□□□□ -1.31
CPSF1P1-201ENST00000397477 SERP2Q8N6R1 65 aa6.84□□□□□ -1.32
CPSF1P1-201ENST00000397477 CYSTM1Q9H1C7 97 aa6.84□□□□□ -1.32
CPSF1P1-201ENST00000397477 LINC00167Q96N53 147 aa6.83□□□□□ -1.32
CPSF1P1-201ENST00000397477 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
CPSF1P1-201ENST00000397477 KRTAP26-1Q6PEX3 210 aa6.83□□□□□ -1.32
CPSF1P1-201ENST00000397477 A0A0G2JQZ4 141 aa6.82□□□□□ -1.32
CPSF1P1-201ENST00000397477 A0A1W2PNN7 141 aa6.82□□□□□ -1.32
CPSF1P1-201ENST00000397477 DNAH10OSP0CZ25 163 aa6.82□□□□□ -1.32
CPSF1P1-201ENST00000397477 CRYGAP11844 174 aa6.81□□□□□ -1.32
CPSF1P1-201ENST00000397477 PRLHP81277 87 aa6.81□□□□□ -1.32
CPSF1P1-201ENST00000397477 BRK1Q8WUW1 75 aa6.81□□□□□ -1.32
CPSF1P1-201ENST00000397477 F8WEM9 126 aa6.81□□□□□ -1.32
CPSF1P1-201ENST00000397477 PDE6GP18545 87 aa6.81□□□□□ -1.32
CPSF1P1-201ENST00000397477 FUSP35637 526 aaKnown RBP eCLIP6.8□□□□□ -1.32
CPSF1P1-201ENST00000397477 LINC00528Q8N1L1 170 aa6.8□□□□□ -1.32
CPSF1P1-201ENST00000397477 CHTF8P0CG12 524 aa6.8□□□□□ -1.32
CPSF1P1-201ENST00000397477 BPY2O14599 106 aa6.8□□□□□ -1.32
CPSF1P1-201ENST00000397477 DEFB116Q30KQ4 102 aa6.79□□□□□ -1.32
CPSF1P1-201ENST00000397477 MRPL55Q7Z7F7 128 aaKnown RBP6.79□□□□□ -1.32
CPSF1P1-201ENST00000397477 ATP5EP2Q5VTU8 51 aa6.79□□□□□ -1.32
CPSF1P1-201ENST00000397477 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
CPSF1P1-201ENST00000397477 C1orf137Q5JT78 98 aa6.77□□□□□ -1.33
CPSF1P1-201ENST00000397477 LOC110117498A0A087WWA1 95 aa6.76□□□□□ -1.33
CPSF1P1-201ENST00000397477 FAM236DA0A1B0GTK5 79 aa6.76□□□□□ -1.33
CPSF1P1-201ENST00000397477 FAM236CP0DP71 79 aa6.76□□□□□ -1.33
CPSF1P1-201ENST00000397477 ERC2-IT1O76042 136 aa6.76□□□□□ -1.33
CPSF1P1-201ENST00000397477 H3BQ85 93 aa6.76□□□□□ -1.33
CPSF1P1-201ENST00000397477 OXTP01178 125 aa6.76□□□□□ -1.33
CPSF1P1-201ENST00000397477 TM2D3Q9BRN9 247 aa6.76□□□□□ -1.33
CPSF1P1-201ENST00000397477 LINC00336Q6ZUF6 198 aa6.75□□□□□ -1.33
CPSF1P1-201ENST00000397477 Q8N377 158 aa6.75□□□□□ -1.33
CPSF1P1-201ENST00000397477 DHRS4-AS1Q9P1J3 65 aa6.75□□□□□ -1.33
CPSF1P1-201ENST00000397477 REG3GQ6UW15 175 aa6.75□□□□□ -1.33
CPSF1P1-201ENST00000397477 MDFIQ99750 246 aa6.75□□□□□ -1.33
CPSF1P1-201ENST00000397477 CSMD3Q7Z407 3707 aa6.74□□□□□ -1.33
CPSF1P1-201ENST00000397477 Q6ZRX8 168 aa6.74□□□□□ -1.33
CPSF1P1-201ENST00000397477 UBE2AP49459 152 aa6.74□□□□□ -1.33
CPSF1P1-201ENST00000397477 KCNQ1DNQ9H478 68 aa6.74□□□□□ -1.33
CPSF1P1-201ENST00000397477 KRTAP1-5Q9BYS1 174 aa6.74□□□□□ -1.33
CPSF1P1-201ENST00000397477 MPLKIPQ8TAP9 179 aa6.73□□□□□ -1.33
CPSF1P1-201ENST00000397477 TRBV7-4A0A0J9YYF1 115 aa6.73□□□□□ -1.33
CPSF1P1-201ENST00000397477 PHF5AQ7RTV0 110 aaKnown RBP6.73□□□□□ -1.33
CPSF1P1-201ENST00000397477 IGLV1-50A0A075B6I6 118 aa6.73□□□□□ -1.33
CPSF1P1-201ENST00000397477 Q9BRP9 147 aa6.73□□□□□ -1.33
CPSF1P1-201ENST00000397477 PRO0628Q9UI54 55 aa6.73□□□□□ -1.33
CPSF1P1-201ENST00000397477 V9GYY9 64 aa6.72□□□□□ -1.33
CPSF1P1-201ENST00000397477 TRBV7-6A0A0J9YX20 115 aa6.71□□□□□ -1.33
CPSF1P1-201ENST00000397477 PRYO14603 147 aa6.71□□□□□ -1.34
CPSF1P1-201ENST00000397477 FAM30AQ9NZY2 134 aa6.71□□□□□ -1.34
CPSF1P1-201ENST00000397477 Q5XG85 94 aa6.7□□□□□ -1.34
CPSF1P1-201ENST00000397477 C1orf195Q5TG92 126 aa6.69□□□□□ -1.34
CPSF1P1-201ENST00000397477 SEC61GP60059 68 aa6.68□□□□□ -1.34
CPSF1P1-201ENST00000397477 WFDC13Q8IUB5 93 aa6.68□□□□□ -1.34
CPSF1P1-201ENST00000397477 TRAV7A0A075B6U4 112 aa6.68□□□□□ -1.34
CPSF1P1-201ENST00000397477 A0A087WSZ3 146 aa6.68□□□□□ -1.34
CPSF1P1-201ENST00000397477 F8WDY8 70 aa6.68□□□□□ -1.34
CPSF1P1-201ENST00000397477 CXCL6P80162 114 aa6.67□□□□□ -1.34
CPSF1P1-201ENST00000397477 ANK2Q01484 3957 aa6.67□□□□□ -1.34
CPSF1P1-201ENST00000397477 SRRM2Q9UQ35 2752 aaKnown RBP6.67□□□□□ -1.34
CPSF1P1-201ENST00000397477 A0A1W2PNM2 257 aa6.66□□□□□ -1.34
CPSF1P1-201ENST00000397477 LINC00476Q8WZB0 136 aa6.66□□□□□ -1.34
CPSF1P1-201ENST00000397477 IGLV9-49A0A0B4J1Y8 123 aa6.65□□□□□ -1.34
CPSF1P1-201ENST00000397477 KRTAP7-1Q8IUC3 87 aa6.65□□□□□ -1.34
CPSF1P1-201ENST00000397477 TLX1NBP0CAT3 122 aa6.65□□□□□ -1.35
CPSF1P1-201ENST00000397477 PRR4Q16378 134 aa6.65□□□□□ -1.35
CPSF1P1-201ENST00000397477 C16orf90A8MZG2 172 aa6.64□□□□□ -1.35
CPSF1P1-201ENST00000397477 C14orf177Q52M58 125 aa6.64□□□□□ -1.35
CPSF1P1-201ENST00000397477 SERP1Q9Y6X1 66 aa6.64□□□□□ -1.35
CPSF1P1-201ENST00000397477 SMIM29Q86T20 159 aa6.64□□□□□ -1.35
CPSF1P1-201ENST00000397477 LINC00474Q9P2X8 69 aa6.64□□□□□ -1.35
CPSF1P1-201ENST00000397477 EPM2AB3EWF7 344 aa6.63□□□□□ -1.35
CPSF1P1-201ENST00000397477 RPL37AP61513 92 aaKnown RBP6.63□□□□□ -1.35
CPSF1P1-201ENST00000397477 Q8NBF4 154 aa6.63□□□□□ -1.35
CPSF1P1-201ENST00000397477 APLNQ9ULZ1 77 aa6.63□□□□□ -1.35
CPSF1P1-201ENST00000397477 SMIM26A0A096LP01 95 aa6.63□□□□□ -1.35
CPSF1P1-201ENST00000397477 H0Y9J4 135 aa6.62□□□□□ -1.35
CPSF1P1-201ENST00000397477 NBDYA0A0U1RRE5 68 aa6.62□□□□□ -1.35
CPSF1P1-201ENST00000397477 B9D2Q9BPU9 175 aa6.61□□□□□ -1.35
CPSF1P1-201ENST00000397477 IGKV4-1P06312 121 aa6.61□□□□□ -1.35
CPSF1P1-201ENST00000397477 TMEM254Q8TBM7 123 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms