RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 A0A1W2PPM0 123 aa13.25□□□□□ -0.29
CPNE1-204ENST00000397443 EPM2AB3EWF7 344 aa13.24□□□□□ -0.29
CPNE1-204ENST00000397443 KCNQ1DNQ9H478 68 aa13.24□□□□□ -0.29
CPNE1-204ENST00000397443 DIRC1Q969H9 104 aa13.22□□□□□ -0.29
CPNE1-204ENST00000397443 A0A1B0GV90 55 aa13.21□□□□□ -0.29
CPNE1-204ENST00000397443 COX6CP09669 75 aa13.21□□□□□ -0.29
CPNE1-204ENST00000397443 FABP2P12104 132 aa13.21□□□□□ -0.29
CPNE1-204ENST00000397443 CLEC2BQ92478 149 aa13.21□□□□□ -0.29
CPNE1-204ENST00000397443 PRYO14603 147 aa13.21□□□□□ -0.3
CPNE1-204ENST00000397443 REG3GQ6UW15 175 aa13.21□□□□□ -0.3
CPNE1-204ENST00000397443 CBY1Q9Y3M2 126 aa13.2□□□□□ -0.3
CPNE1-204ENST00000397443 VAMP3Q15836 100 aa13.19□□□□□ -0.3
CPNE1-204ENST00000397443 ETDCA0A1B0GVM5 59 aa13.16□□□□□ -0.3
CPNE1-204ENST00000397443 TCL1BO95988 128 aa13.15□□□□□ -0.3
CPNE1-204ENST00000397443 COX7BP24311 80 aa13.15□□□□□ -0.3
CPNE1-204ENST00000397443 FAM218AQ96MZ4 157 aa13.15□□□□□ -0.3
CPNE1-204ENST00000397443 SPCS1Q9Y6A9 102 aa13.15□□□□□ -0.3
CPNE1-204ENST00000397443 LYRM7Q5U5X0 104 aa13.15□□□□□ -0.3
CPNE1-204ENST00000397443 SPRR1AP35321 89 aa13.13□□□□□ -0.31
CPNE1-204ENST00000397443 XGP55808 180 aa13.13□□□□□ -0.31
CPNE1-204ENST00000397443 FAM19A1Q7Z5A9 133 aa13.13□□□□□ -0.31
CPNE1-204ENST00000397443 PSORS1C2Q9UIG4 136 aa13.13□□□□□ -0.31
CPNE1-204ENST00000397443 ELOF1P60002 83 aaKnown RBP13.13□□□□□ -0.31
CPNE1-204ENST00000397443 KRTAP4-16G5E9R7 235 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-204ENST00000397443 H0YGX0 51 aa13.12□□□□□ -0.31
CPNE1-204ENST00000397443 PRLHP81277 87 aa13.12□□□□□ -0.31
CPNE1-204ENST00000397443 APOBP04114 4563 aaKnown RBP13.1□□□□□ -0.31
CPNE1-204ENST00000397443 B5MCH6 92 aa13.1□□□□□ -0.31
CPNE1-204ENST00000397443 EPPK1P58107 5090 aaKnown RBP13.1□□□□□ -0.31
CPNE1-204ENST00000397443 C1orf137Q5JT78 98 aa13.09□□□□□ -0.31
CPNE1-204ENST00000397443 SMR3BP02814 79 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-204ENST00000397443 Q6ZRX8 168 aa13.09□□□□□ -0.31
CPNE1-204ENST00000397443 TRBV7-6A0A0J9YX20 115 aa13.08□□□□□ -0.32
CPNE1-204ENST00000397443 H3BMG7 143 aa13.08□□□□□ -0.32
CPNE1-204ENST00000397443 LINC00528Q8N1L1 170 aa13.08□□□□□ -0.32
CPNE1-204ENST00000397443 K7EP34 96 aa13.07□□□□□ -0.32
CPNE1-204ENST00000397443 ATXN8Q156A1 80 aa13.07□□□□□ -0.32
CPNE1-204ENST00000397443 LINC00575Q6W349 94 aa13.07□□□□□ -0.32
CPNE1-204ENST00000397443 TRBV20-1A0A075B6N2 111 aa13.07□□□□□ -0.32
CPNE1-204ENST00000397443 LST1O00453 97 aa13.07□□□□□ -0.32
CPNE1-204ENST00000397443 BCE1O60756 84 aa13.07□□□□□ -0.32
CPNE1-204ENST00000397443 UBE2AP49459 152 aa13.07□□□□□ -0.32
CPNE1-204ENST00000397443 Q9BRP9 147 aa13.05□□□□□ -0.32
CPNE1-204ENST00000397443 MTURNQ8N3F0 131 aa13.05□□□□□ -0.32
CPNE1-204ENST00000397443 SLC25A20O43772 301 aa13.04□□□□□ -0.32
CPNE1-204ENST00000397443 GTF2H5Q6ZYL4 71 aa13.04□□□□□ -0.32
CPNE1-204ENST00000397443 HIGD2AQ9BW72 106 aa13.04□□□□□ -0.32
CPNE1-204ENST00000397443 hADV29S1A0JD25 119 aa13.03□□□□□ -0.32
CPNE1-204ENST00000397443 SRRM2Q9UQ35 2752 aaKnown RBP13.03□□□□□ -0.32
CPNE1-204ENST00000397443 DNAL4O96015 105 aa13.01□□□□□ -0.33
CPNE1-204ENST00000397443 SMCR5Q8TEV8 140 aa13□□□□□ -0.33
CPNE1-204ENST00000397443 ERC2-IT1O76042 136 aa13□□□□□ -0.33
CPNE1-204ENST00000397443 SNCGO76070 127 aa13□□□□□ -0.33
CPNE1-204ENST00000397443 DHRS4-AS1Q9P1J3 65 aa13□□□□□ -0.33
CPNE1-204ENST00000397443 C9JAW5 83 aa12.99□□□□□ -0.33
CPNE1-204ENST00000397443 TRACP01848 142 aa12.99□□□□□ -0.33
CPNE1-204ENST00000397443 VPS13BQ7Z7G8 4022 aa12.99□□□□□ -0.33
CPNE1-204ENST00000397443 Q6ZQY7 126 aa12.98□□□□□ -0.33
CPNE1-204ENST00000397443 KRTAP13-1Q8IUC0 172 aa12.97□□□□□ -0.33
CPNE1-204ENST00000397443 IGLV7-43P04211 117 aa12.96□□□□□ -0.33
CPNE1-204ENST00000397443 INAFM2P0DMQ5 153 aa12.96□□□□□ -0.33
CPNE1-204ENST00000397443 A0A1B0GX51 115 aa12.96□□□□□ -0.34
CPNE1-204ENST00000397443 UBE2V1Q13404 147 aa12.96□□□□□ -0.34
CPNE1-204ENST00000397443 H0Y9J4 135 aa12.95□□□□□ -0.34
CPNE1-204ENST00000397443 ST20-AS1Q8NBB2 130 aa12.95□□□□□ -0.34
CPNE1-204ENST00000397443 RPL37AP61513 92 aaKnown RBP12.94□□□□□ -0.34
CPNE1-204ENST00000397443 DEFB105AQ8NG35 78 aa12.94□□□□□ -0.34
CPNE1-204ENST00000397443 FAT1Q14517 4588 aa12.93□□□□□ -0.34
CPNE1-204ENST00000397443 ZNF861PO60384 105 aa12.93□□□□□ -0.34
CPNE1-204ENST00000397443 CDK2AP2O75956 126 aa12.93□□□□□ -0.34
CPNE1-204ENST00000397443 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-204ENST00000397443 ORMDL1Q9P0S3 153 aa12.9□□□□□ -0.34
CPNE1-204ENST00000397443 BAALC-AS2P0C853 105 aa12.9□□□□□ -0.35
CPNE1-204ENST00000397443 HSPG2P98160 4391 aa12.88□□□□□ -0.35
CPNE1-204ENST00000397443 PRO0461Q9UI25 63 aa12.88□□□□□ -0.35
CPNE1-204ENST00000397443 RYR1P21817 5038 aa12.87□□□□□ -0.35
CPNE1-204ENST00000397443 KIAA1109Q2LD37 5005 aa12.87□□□□□ -0.35
CPNE1-204ENST00000397443 SMCPP49901 116 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-204ENST00000397443 A0A1B0GV72 72 aa12.84□□□□□ -0.35
CPNE1-204ENST00000397443 GAGE2AQ6NT46 116 aa12.84□□□□□ -0.35
CPNE1-204ENST00000397443 ANKRD29Q8N6D5 301 aa12.84□□□□□ -0.35
CPNE1-204ENST00000397443 F8W1H4 67 aa12.82□□□□□ -0.36
CPNE1-204ENST00000397443 LINC01547P58512 204 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-204ENST00000397443 Q8N377 158 aa12.82□□□□□ -0.36
CPNE1-204ENST00000397443 C3orf22Q8N5N4 141 aa12.82□□□□□ -0.36
CPNE1-204ENST00000397443 FAM229AH3BQW9 127 aa12.81□□□□□ -0.36
CPNE1-204ENST00000397443 H3BT86 120 aa12.81□□□□□ -0.36
CPNE1-204ENST00000397443 OCIAD2Q56VL3 154 aa12.81□□□□□ -0.36
CPNE1-204ENST00000397443 TMEM256-PLSCR3K7ERE1 68 aa12.8□□□□□ -0.36
CPNE1-204ENST00000397443 ANAPC11Q9NYG5 84 aa12.79□□□□□ -0.36
CPNE1-204ENST00000397443 IGLV5-48A0A075B6I7 105 aa12.78□□□□□ -0.36
CPNE1-204ENST00000397443 KRTAP10-4P60372 401 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-204ENST00000397443 Q5VSD8 79 aa12.78□□□□□ -0.36
CPNE1-204ENST00000397443 SPRR4Q96PI1 79 aa12.78□□□□□ -0.36
CPNE1-204ENST00000397443 TEX49A0A1B0GTD5 131 aa12.78□□□□□ -0.36
CPNE1-204ENST00000397443 LAMTOR3Q9UHA4 124 aa12.78□□□□□ -0.36
CPNE1-204ENST00000397443 KRTAP17-1Q9BYP8 105 aa12.77□□□□□ -0.37
CPNE1-204ENST00000397443 PLA2G1BP04054 148 aaKnown RBP12.76□□□□□ -0.37
CPNE1-204ENST00000397443 GHRHP01286 108 aa12.76□□□□□ -0.37
CPNE1-204ENST00000397443 ZNF706Q9Y5V0 76 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms