RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 CHTF8P0CG12 524 aa8.41□□□□□ -1.06
SEC13-209ENST00000397117 Q1RN00 199 aa8.41□□□□□ -1.06
SEC13-209ENST00000397117 S100A7L2Q5SY68 101 aa8.41□□□□□ -1.06
SEC13-209ENST00000397117 LINC00337Q8N6G1 96 aa8.41□□□□□ -1.06
SEC13-209ENST00000397117 PRO0461Q9UI25 63 aa8.41□□□□□ -1.06
SEC13-209ENST00000397117 FAM168BA1KXE4 195 aa8.4□□□□□ -1.06
SEC13-209ENST00000397117 SERTAD4-AS1Q5TG53 156 aa8.4□□□□□ -1.06
SEC13-209ENST00000397117 FAM19A5Q7Z5A7 132 aaPredicted RBP8.4□□□□□ -1.06
SEC13-209ENST00000397117 TRBV20-1A0A075B6N2 111 aa8.4□□□□□ -1.07
SEC13-209ENST00000397117 M0R378 163 aa8.4□□□□□ -1.07
SEC13-209ENST00000397117 TMEM126AQ9H061 195 aa8.39□□□□□ -1.07
SEC13-209ENST00000397117 IGLV5-37A0A075B6J1 123 aa8.38□□□□□ -1.07
SEC13-209ENST00000397117 H3BMG7 143 aa8.38□□□□□ -1.07
SEC13-209ENST00000397117 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
SEC13-209ENST00000397117 SPACA4Q8TDM5 124 aa8.37□□□□□ -1.07
SEC13-209ENST00000397117 C22orf24Q9Y442 160 aa8.37□□□□□ -1.07
SEC13-209ENST00000397117 A0A1W2PNN7 141 aa8.36□□□□□ -1.07
SEC13-209ENST00000397117 J3QR89 54 aa8.36□□□□□ -1.07
SEC13-209ENST00000397117 PSMB2P49721 201 aa8.36□□□□□ -1.07
SEC13-209ENST00000397117 Q6ZSA8 131 aa8.36□□□□□ -1.07
SEC13-209ENST00000397117 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
SEC13-209ENST00000397117 HMCN2Q8NDA2 5059 aa8.36□□□□□ -1.07
SEC13-209ENST00000397117 M0QXV9 152 aa8.36□□□□□ -1.07
SEC13-209ENST00000397117 IGLV6-57P01721 117 aa8.36□□□□□ -1.07
SEC13-209ENST00000397117 MRPL55Q7Z7F7 128 aaKnown RBP8.36□□□□□ -1.07
SEC13-209ENST00000397117 VPS25Q9BRG1 176 aa8.36□□□□□ -1.07
SEC13-209ENST00000397117 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
SEC13-209ENST00000397117 TRBV10-3A0A0K0K1G6 114 aa8.35□□□□□ -1.07
SEC13-209ENST00000397117 PANO1I0J062 215 aa8.35□□□□□ -1.07
SEC13-209ENST00000397117 KRTAP7-1Q8IUC3 87 aa8.35□□□□□ -1.07
SEC13-209ENST00000397117 LINC00528Q8N1L1 170 aa8.35□□□□□ -1.07
SEC13-209ENST00000397117 C7orf33Q8WU49 177 aa8.35□□□□□ -1.07
SEC13-209ENST00000397117 UBR4Q5T4S7 5183 aa8.35□□□□□ -1.07
SEC13-209ENST00000397117 SMIM11BQ8TCY0 68 aa8.33□□□□□ -1.08
SEC13-209ENST00000397117 LINC00167Q96N53 147 aa8.33□□□□□ -1.08
SEC13-209ENST00000397117 TRAV23DV6A0A075B6W5 121 aa8.32□□□□□ -1.08
SEC13-209ENST00000397117 A0A087WYN8 130 aa8.32□□□□□ -1.08
SEC13-209ENST00000397117 TRIAP1O43715 76 aa8.32□□□□□ -1.08
SEC13-209ENST00000397117 COX6CP09669 75 aa8.32□□□□□ -1.08
SEC13-209ENST00000397117 SCGB1C2P0DMR2 95 aa8.32□□□□□ -1.08
SEC13-209ENST00000397117 RPL37AP8A6NKH3 93 aa8.32□□□□□ -1.08
SEC13-209ENST00000397117 RPL28P46779 137 aaKnown RBP8.32□□□□□ -1.08
SEC13-209ENST00000397117 SMCPP49901 116 aaPredicted RBP8.32□□□□□ -1.08
SEC13-209ENST00000397117 FAT3Q8TDW7 4589 aa8.31□□□□□ -1.08
SEC13-209ENST00000397117 TCL1BO95988 128 aa8.31□□□□□ -1.08
SEC13-209ENST00000397117 KRTAP10-4P60372 401 aaPredicted RBP8.31□□□□□ -1.08
SEC13-209ENST00000397117 IGLV1-50A0A075B6I6 118 aa8.3□□□□□ -1.08
SEC13-209ENST00000397117 PCP4P48539 62 aa8.3□□□□□ -1.08
SEC13-209ENST00000397117 UBE2BP63146 152 aa8.3□□□□□ -1.08
SEC13-209ENST00000397117 ETDBQ3ZM63 59 aa8.3□□□□□ -1.08
SEC13-209ENST00000397117 PHF5AQ7RTV0 110 aaKnown RBP8.3□□□□□ -1.08
SEC13-209ENST00000397117 PLAC8Q9NZF1 115 aa8.3□□□□□ -1.08
SEC13-209ENST00000397117 LINC01600Q96MT4 127 aa8.29□□□□□ -1.08
SEC13-209ENST00000397117 ZNF73O43830 326 aaPredicted RBP8.29□□□□□ -1.08
SEC13-209ENST00000397117 OXTP01178 125 aa8.29□□□□□ -1.08
SEC13-209ENST00000397117 KCNQ1DNQ9H478 68 aa8.29□□□□□ -1.08
SEC13-209ENST00000397117 PKHD1L1Q86WI1 4243 aa8.28□□□□□ -1.08
SEC13-209ENST00000397117 PRYO14603 147 aa8.28□□□□□ -1.08
SEC13-209ENST00000397117 C6orf99Q4VX62 202 aa8.28□□□□□ -1.08
SEC13-209ENST00000397117 MTURNQ8N3F0 131 aa8.28□□□□□ -1.08
SEC13-209ENST00000397117 DIRC1Q969H9 104 aa8.28□□□□□ -1.08
SEC13-209ENST00000397117 SCXQ7RTU7 201 aa8.27□□□□□ -1.09
SEC13-209ENST00000397117 H0YGX0 51 aa8.25□□□□□ -1.09
SEC13-209ENST00000397117 ATXN8Q156A1 80 aa8.25□□□□□ -1.09
SEC13-209ENST00000397117 TEN1Q86WV5 123 aa8.25□□□□□ -1.09
SEC13-209ENST00000397117 REG3GQ6UW15 175 aa8.25□□□□□ -1.09
SEC13-209ENST00000397117 CIRBP-AS1Q8TBR5 109 aa8.25□□□□□ -1.09
SEC13-209ENST00000397117 TRBV7-6A0A0J9YX20 115 aa8.23□□□□□ -1.09
SEC13-209ENST00000397117 ETDCA0A1B0GVM5 59 aa8.23□□□□□ -1.09
SEC13-209ENST00000397117 LST1O00453 97 aa8.23□□□□□ -1.09
SEC13-209ENST00000397117 COX7BP24311 80 aa8.23□□□□□ -1.09
SEC13-209ENST00000397117 PPDPFLQ8WWR9 84 aa8.23□□□□□ -1.09
SEC13-209ENST00000397117 CLEC2BQ92478 149 aa8.23□□□□□ -1.09
SEC13-209ENST00000397117 SNCGO76070 127 aa8.21□□□□□ -1.09
SEC13-209ENST00000397117 SLC25A20O43772 301 aa8.21□□□□□ -1.1
SEC13-209ENST00000397117 SPRR1AP35321 89 aa8.21□□□□□ -1.1
SEC13-209ENST00000397117 ELOF1P60002 83 aaKnown RBP8.21□□□□□ -1.1
SEC13-209ENST00000397117 KRTAP11-1Q8IUC1 163 aa8.2□□□□□ -1.1
SEC13-209ENST00000397117 C9JAW5 83 aa8.19□□□□□ -1.1
SEC13-209ENST00000397117 ANKRD29Q8N6D5 301 aa8.19□□□□□ -1.1
SEC13-209ENST00000397117 FAM218AQ96MZ4 157 aa8.19□□□□□ -1.1
SEC13-209ENST00000397117 B5MCH6 92 aa8.18□□□□□ -1.1
SEC13-209ENST00000397117 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
SEC13-209ENST00000397117 C21orf62-AS1Q17RA5 79 aa8.18□□□□□ -1.1
SEC13-209ENST00000397117 LINC00575Q6W349 94 aa8.18□□□□□ -1.1
SEC13-209ENST00000397117 FAM19A1Q7Z5A9 133 aa8.18□□□□□ -1.1
SEC13-209ENST00000397117 Q6ZRX8 168 aa8.18□□□□□ -1.1
SEC13-209ENST00000397117 A0A1B0GX51 115 aa8.17□□□□□ -1.1
SEC13-209ENST00000397117 hADV29S1A0JD25 119 aa8.17□□□□□ -1.1
SEC13-209ENST00000397117 H3BT86 120 aa8.17□□□□□ -1.1
SEC13-209ENST00000397117 BCE1O60756 84 aa8.17□□□□□ -1.1
SEC13-209ENST00000397117 DNAL4O96015 105 aa8.17□□□□□ -1.1
SEC13-209ENST00000397117 TRACP01848 142 aa8.17□□□□□ -1.1
SEC13-209ENST00000397117 SCGB1A1P11684 91 aa8.17□□□□□ -1.1
SEC13-209ENST00000397117 SIGMAR1Q99720 223 aa8.17□□□□□ -1.1
SEC13-209ENST00000397117 PSORS1C2Q9UIG4 136 aa8.17□□□□□ -1.1
SEC13-209ENST00000397117 UBE2AP49459 152 aa8.16□□□□□ -1.1
SEC13-209ENST00000397117 CDIP1Q9H305 208 aa8.16□□□□□ -1.1
SEC13-209ENST00000397117 DHRS4-AS1Q9P1J3 65 aa8.16□□□□□ -1.1
SEC13-209ENST00000397117 C1orf137Q5JT78 98 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms