RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 CASC10Q5T4H9 136 aa12.45□□□□□ -0.42
SMARCC2-203ENST00000394023 LOC107984640A0A0U1RRK4 108 aa12.44□□□□□ -0.42
SMARCC2-203ENST00000394023 C22orf24Q9Y442 160 aa12.44□□□□□ -0.42
SMARCC2-203ENST00000394023 Q6ZVQ6 151 aa12.43□□□□□ -0.42
SMARCC2-203ENST00000394023 TRRAPQ9Y4A5 3859 aa12.43□□□□□ -0.42
SMARCC2-203ENST00000394023 SERTAD4-AS1Q5TG53 156 aa12.43□□□□□ -0.42
SMARCC2-203ENST00000394023 SERP2Q8N6R1 65 aa12.43□□□□□ -0.42
SMARCC2-203ENST00000394023 ANK3Q12955 4377 aaKnown RBP12.43□□□□□ -0.42
SMARCC2-203ENST00000394023 BPY2O14599 106 aa12.42□□□□□ -0.42
SMARCC2-203ENST00000394023 ELOF1P60002 83 aaKnown RBP12.42□□□□□ -0.42
SMARCC2-203ENST00000394023 DNAH10OSP0CZ25 163 aa12.41□□□□□ -0.42
SMARCC2-203ENST00000394023 STAB2Q8WWQ8 2551 aa12.41□□□□□ -0.42
SMARCC2-203ENST00000394023 Q6ZQT0 140 aa12.4□□□□□ -0.42
SMARCC2-203ENST00000394023 LINC00167Q96N53 147 aa12.39□□□□□ -0.43
SMARCC2-203ENST00000394023 DHRS4-AS1Q9P1J3 65 aa12.39□□□□□ -0.43
SMARCC2-203ENST00000394023 UBE2AP49459 152 aa12.38□□□□□ -0.43
SMARCC2-203ENST00000394023 MRPL55Q7Z7F7 128 aaKnown RBP12.38□□□□□ -0.43
SMARCC2-203ENST00000394023 LINC01547P58512 204 aaPredicted RBP12.38□□□□□ -0.43
SMARCC2-203ENST00000394023 Q8N9L7 120 aa12.38□□□□□ -0.43
SMARCC2-203ENST00000394023 PKD1L1Q8TDX9 2849 aa12.36□□□□□ -0.43
SMARCC2-203ENST00000394023 PRLHP81277 87 aa12.34□□□□□ -0.43
SMARCC2-203ENST00000394023 SNURFQ9Y675 71 aa12.34□□□□□ -0.43
SMARCC2-203ENST00000394023 ST20-AS1Q8NBB2 130 aa12.33□□□□□ -0.44
SMARCC2-203ENST00000394023 C1orf137Q5JT78 98 aa12.32□□□□□ -0.44
SMARCC2-203ENST00000394023 REG3GQ6UW15 175 aa12.32□□□□□ -0.44
SMARCC2-203ENST00000394023 F8WDY8 70 aa12.31□□□□□ -0.44
SMARCC2-203ENST00000394023 C14orf177Q52M58 125 aa12.31□□□□□ -0.44
SMARCC2-203ENST00000394023 LINC00528Q8N1L1 170 aa12.31□□□□□ -0.44
SMARCC2-203ENST00000394023 OBSCN-AS1Q96MR7 158 aa12.31□□□□□ -0.44
SMARCC2-203ENST00000394023 TM2D3Q9BRN9 247 aa12.28□□□□□ -0.44
SMARCC2-203ENST00000394023 AKAP9Q99996 3911 aa12.28□□□□□ -0.44
SMARCC2-203ENST00000394023 LOC110117498A0A087WWA1 95 aa12.28□□□□□ -0.44
SMARCC2-203ENST00000394023 PRYO14603 147 aa12.27□□□□□ -0.45
SMARCC2-203ENST00000394023 TRBV7-6A0A0J9YX20 115 aa12.27□□□□□ -0.45
SMARCC2-203ENST00000394023 CHTF8P0CG12 524 aa12.27□□□□□ -0.45
SMARCC2-203ENST00000394023 Q6ZRX8 168 aa12.25□□□□□ -0.45
SMARCC2-203ENST00000394023 DEFB116Q30KQ4 102 aa12.24□□□□□ -0.45
SMARCC2-203ENST00000394023 KRTAP26-1Q6PEX3 210 aa12.24□□□□□ -0.45
SMARCC2-203ENST00000394023 KCNQ1DNQ9H478 68 aa12.23□□□□□ -0.45
SMARCC2-203ENST00000394023 J3KT08 172 aa12.22□□□□□ -0.45
SMARCC2-203ENST00000394023 MDFIQ99750 246 aa12.2□□□□□ -0.46
SMARCC2-203ENST00000394023 IGLV1-50A0A075B6I6 118 aa12.2□□□□□ -0.46
SMARCC2-203ENST00000394023 B9D2Q9BPU9 175 aa12.19□□□□□ -0.46
SMARCC2-203ENST00000394023 Q8N377 158 aa12.19□□□□□ -0.46
SMARCC2-203ENST00000394023 PHF5AQ7RTV0 110 aaKnown RBP12.18□□□□□ -0.46
SMARCC2-203ENST00000394023 A0A0G2JQZ4 141 aa12.18□□□□□ -0.46
SMARCC2-203ENST00000394023 A0A1W2PNN7 141 aa12.18□□□□□ -0.46
SMARCC2-203ENST00000394023 TRAV7A0A075B6U4 112 aa12.17□□□□□ -0.46
SMARCC2-203ENST00000394023 TRBV7-4A0A0J9YYF1 115 aa12.16□□□□□ -0.46
SMARCC2-203ENST00000394023 CXCL6P80162 114 aa12.16□□□□□ -0.46
SMARCC2-203ENST00000394023 ERC2-IT1O76042 136 aa12.15□□□□□ -0.46
SMARCC2-203ENST00000394023 FAM30AQ9NZY2 134 aa12.15□□□□□ -0.46
SMARCC2-203ENST00000394023 NUPR2A6NF83 97 aa12.15□□□□□ -0.46
SMARCC2-203ENST00000394023 WFDC13Q8IUB5 93 aa12.15□□□□□ -0.46
SMARCC2-203ENST00000394023 A0A087WSZ3 146 aa12.14□□□□□ -0.47
SMARCC2-203ENST00000394023 CRYGAP11844 174 aa12.14□□□□□ -0.47
SMARCC2-203ENST00000394023 TMEM258P61165 79 aa12.14□□□□□ -0.47
SMARCC2-203ENST00000394023 Q9BRP9 147 aa12.13□□□□□ -0.47
SMARCC2-203ENST00000394023 HRCT1Q6UXD1 115 aa12.13□□□□□ -0.47
SMARCC2-203ENST00000394023 IGLV9-49A0A0B4J1Y8 123 aa12.12□□□□□ -0.47
SMARCC2-203ENST00000394023 FAM236DA0A1B0GTK5 79 aa12.12□□□□□ -0.47
SMARCC2-203ENST00000394023 H0Y9J4 135 aa12.12□□□□□ -0.47
SMARCC2-203ENST00000394023 FAM236CP0DP71 79 aa12.12□□□□□ -0.47
SMARCC2-203ENST00000394023 C16orf90A8MZG2 172 aa12.11□□□□□ -0.47
SMARCC2-203ENST00000394023 PKIGQ9Y2B9 76 aa12.11□□□□□ -0.47
SMARCC2-203ENST00000394023 TLX1NBP0CAT3 122 aa12.1□□□□□ -0.47
SMARCC2-203ENST00000394023 LY6G6CO95867 125 aa12.1□□□□□ -0.47
SMARCC2-203ENST00000394023 CDK2AP2O75956 126 aa12.1□□□□□ -0.47
SMARCC2-203ENST00000394023 NBDYA0A0U1RRE5 68 aa12.08□□□□□ -0.48
SMARCC2-203ENST00000394023 LINC00476Q8WZB0 136 aa12.08□□□□□ -0.48
SMARCC2-203ENST00000394023 KRTAP1-5Q9BYS1 174 aa12.07□□□□□ -0.48
SMARCC2-203ENST00000394023 Q8NBF4 154 aa12.06□□□□□ -0.48
SMARCC2-203ENST00000394023 EPM2AB3EWF7 344 aa12.04□□□□□ -0.48
SMARCC2-203ENST00000394023 LINC00474Q9P2X8 69 aa12.04□□□□□ -0.48
SMARCC2-203ENST00000394023 APLNQ9ULZ1 77 aa12.03□□□□□ -0.48
SMARCC2-203ENST00000394023 NDUFS5O43920 106 aa12.03□□□□□ -0.48
SMARCC2-203ENST00000394023 SMIM29Q86T20 159 aa12.02□□□□□ -0.49
SMARCC2-203ENST00000394023 PLA2G2DQ9UNK4 145 aa12.02□□□□□ -0.49
SMARCC2-203ENST00000394023 PRR4Q16378 134 aa12.01□□□□□ -0.49
SMARCC2-203ENST00000394023 TMEM254Q8TBM7 123 aa12□□□□□ -0.49
SMARCC2-203ENST00000394023 A0A1W2PNM2 257 aa12□□□□□ -0.49
SMARCC2-203ENST00000394023 NDUFB1O75438 58 aa12□□□□□ -0.49
SMARCC2-203ENST00000394023 CYSTM1Q9H1C7 97 aa11.99□□□□□ -0.49
SMARCC2-203ENST00000394023 TENM2Q9NT68 2774 aa11.98□□□□□ -0.49
SMARCC2-203ENST00000394023 MP68P56378 58 aa11.97□□□□□ -0.49
SMARCC2-203ENST00000394023 LRCOL1A6NCL2 159 aa11.97□□□□□ -0.49
SMARCC2-203ENST00000394023 RPL37AP61513 92 aaKnown RBP11.94□□□□□ -0.5
SMARCC2-203ENST00000394023 IGLV5-52A0A0A0MRZ9 124 aa11.94□□□□□ -0.5
SMARCC2-203ENST00000394023 IGFL1Q6UW32 110 aa11.93□□□□□ -0.5
SMARCC2-203ENST00000394023 IGLV5-37A0A075B6J1 123 aa11.93□□□□□ -0.5
SMARCC2-203ENST00000394023 SPINK6Q6UWN8 80 aa11.93□□□□□ -0.5
SMARCC2-203ENST00000394023 IGLV5-48A0A075B6I7 105 aa11.92□□□□□ -0.5
SMARCC2-203ENST00000394023 K7EQZ3 153 aa11.92□□□□□ -0.5
SMARCC2-203ENST00000394023 C9orf163Q8N9P6 203 aa11.92□□□□□ -0.5
SMARCC2-203ENST00000394023 IGKV4-1P06312 121 aa11.92□□□□□ -0.5
SMARCC2-203ENST00000394023 CNBPP62633 177 aaKnown RBP11.91□□□□□ -0.5
SMARCC2-203ENST00000394023 NDUFC1O43677 76 aa11.89□□□□□ -0.51
SMARCC2-203ENST00000394023 MPLKIPQ8TAP9 179 aa11.89□□□□□ -0.51
SMARCC2-203ENST00000394023 C1orf134Q5TEV5 83 aa11.89□□□□□ -0.51
SMARCC2-203ENST00000394023 HCG22E2RYF7 251 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms